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CmoCh07G010360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR2-like
Genome locationCmo_Chr07:5233818..5234416
RNA-Seq ExpressionCmoCh07G010360
SyntenyCmoCh07G010360
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595321.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6997.16Show/hide
Query:  MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVS
        MASQFREISLTPESFRVKLEDADQIEFIFAVENRPL SESQQRCDSSAPEESLLISAVDDEDG RTPTSSDYKIPLVEHCPPAPRRPKP+SLSRTSPRVS
Subjt:  MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVS

Query:  GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHG
        GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKK+RKDDHG
Subjt:  GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHG

KAG6603657.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3459.87Show/hide
Query:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR
        MAS F+EIS             TP+SFRV L DA +QI+FIFA+ ++ PLAS+S     D SAP +S+     DD+DGFRTPTSSD+KIP+V+ CPPAPR
Subjt:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR

Query:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG
        RPKPIS SRT PR SGVRRGFRVYISDEI DSIF      D L  K KKARK+ +GG
Subjt:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]8.2e-3459.87Show/hide
Query:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR
        MAS F+EIS             TP+SFRV L DA +QI+FIFA+ ++ PLAS+S     D SAP +S+     DD+DGFRTPTSSD+KIP+V+ CPPAPR
Subjt:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR

Query:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG
        RPKPIS SRT PR SGVRRGFRVYISDEI DSIF      D L  K KKARK+ +GG
Subjt:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG

XP_023518540.1 uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]9.9e-7297.24Show/hide
Query:  MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVS
        MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLA ESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVS
Subjt:  MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVS

Query:  GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGGRVE
        GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG+++
Subjt:  GVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGGRVE

XP_038877666.1 cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]1.0e-2861.74Show/hide
Query:  MASQFREISLT-PE--SFRVKLED----ADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAV-DDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISL
        MAS+F+EISLT P+  SF           +QI+FIF++ N P         D  AP ES  ISAV DD+DGFRTP SSD+KIP+V HCPPAP+RPKPISL
Subjt:  MASQFREISLT-PE--SFRVKLED----ADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAV-DDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISL

Query:  SRTSP-RVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKN-KKARKDD
        SRTS  R SGVRRGFRVYISDEIVDSIF     SD L  K+ KKARKDD
Subjt:  SRTSP-RVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKN-KKARKDD

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein2.0e-2553.55Show/hide
Query:  MASQFREISLTP---ESFRVKLEDADQIEFIF----AVENRPLASESQQRCDSSAPEESLLISAVDDE----DGFRTPTSSDYKIPLVEHCPPAPRRPKP
        MAS+F+EIS  P      ++ L   D I+F+F    ++   P +  S  R     P  S  ISAVDD+    DGF TP SS +KIP++ HCPPAP RPKP
Subjt:  MASQFREISLTP---ESFRVKLEDADQIEFIF----AVENRPLASESQQRCDSSAPEESLLISAVDDE----DGFRTPTSSDYKIPLVEHCPPAPRRPKP

Query:  ISLSRT-SPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKN-KKARKDDHGG
        ISLSRT SPR SGVRRGF VYISD+IVDSIFS     D L  K+ KKARKDD  G
Subjt:  ISLSRT-SPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKN-KKARKDDHGG

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like1.5e-2551.63Show/hide
Query:  MASQFREISLTP----ESFRVKLEDADQIEFIFAVENRPLASESQ--QRCDSSAPEESLLISAVDDE----DGFRTPTSSDYKIPLVEHCPPAPRRPKPI
        M S+F+EIS  P       ++ L   D I+F+F   +  + +        DS   +  + ISAVDD+    DGF TP SS +KIP++ HCPPAP RPKPI
Subjt:  MASQFREISLTP----ESFRVKLEDADQIEFIFAVENRPLASESQ--QRCDSSAPEESLLISAVDDE----DGFRTPTSSDYKIPLVEHCPPAPRRPKPI

Query:  SLSRT-SPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG
        SLSRT S R S VRRGF VYISDEIVDSIFS     D L HK+KKARKDD  G
Subjt:  SLSRT-SPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG

A0A5D3AH22 Uncharacterized protein8.9e-1047.06Show/hide
Query:  DDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSR---TSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDH
        DD+DGF+TPTS D+KIP+++ CPPAPR+PKP+S  +   +SP  SG  R        + V+S+F S   +D +  K KKARK+D+
Subjt:  DDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSR---TSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDH

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like5.0e-2957.42Show/hide
Query:  MASQFREISL-----------TPESFRVKLEDA-DQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPK
        MAS F+EISL           +PESF + LEDA +QI+F+FA+      ++ Q R D S       ISA  D+DGFRTPTSSD+KIP+++ CPPAPRRPK
Subjt:  MASQFREISL-----------TPESFRVKLEDA-DQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPK

Query:  PISL--SRTSPRV-SGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDH
        PIS    R+SPR+ SGVRRGFRVYISDEIV+SIFSSSF       K KKAR+DDH
Subjt:  PISL--SRTSPRV-SGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDH

A0A6J1GEW0 uncharacterized protein LOC1114535504.0e-3459.87Show/hide
Query:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR
        MAS F+EIS             TP+SFRV L DA +QI+FIFA+ ++ PLAS+S     D SAP +S+     DD+DGFRTPTSSD+KIP+V+ CPPAPR
Subjt:  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLASES-QQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR

Query:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG
        RPKPIS SRT PR SGVRRGFRVYISDEI DSIF      D L  K KKARK+ +GG
Subjt:  RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGG

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR37.5e-0639.76Show/hide
Query:  VDDEDGFRTPTSSDYKIPLVEH--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DEIVDSIFSSSFGSDFLQHKNKKARK
        V++E+G +TPTSSD+KIP V++  CPPAPR+PKP   S T  +++ V    R+ I     ++  F        L  + KK+RK
Subjt:  VDDEDGFRTPTSSDYKIPLVEH--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DEIVDSIFSSSFGSDFLQHKNKKARK

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR24.4e-0637.78Show/hide
Query:  VENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIF
        VE +P + E +   DSS  EE L        +   TPTSSD+KIP VE CPP PR RP+ ISL++ +     +R      +  + V+++F
Subjt:  VENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein3.1e-0737.78Show/hide
Query:  VENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIF
        VE +P + E +   DSS  EE L        +   TPTSSD+KIP VE CPP PR RP+ ISL++ +     +R      +  + V+++F
Subjt:  VENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPR-RPKPISLSRTSPRVSGVRRGFRVYISDEIVDSIF

AT5G02420.1 unknown protein5.4e-0739.76Show/hide
Query:  VDDEDGFRTPTSSDYKIPLVEH--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DEIVDSIFSSSFGSDFLQHKNKKARK
        V++E+G +TPTSSD+KIP V++  CPPAPR+PKP   S T  +++ V    R+ I     ++  F        L  + KK+RK
Subjt:  VDDEDGFRTPTSSDYKIPLVEH--CPPAPRRPKPISLSRTSPRVSGVRRGFRVYIS-DEIVDSIFSSSFGSDFLQHKNKKARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCACAATTCCGAGAAATCTCCCTCACACCAGAATCATTCCGCGTCAAATTGGAGGATGCGGACCAGATCGAGTTCATTTTCGCCGTAGAAAATCGTCCTCTCGC
ATCGGAATCTCAACAACGCTGCGATTCCTCCGCTCCAGAAGAGTCGTTGTTGATCTCCGCTGTGGACGACGAGGACGGTTTCAGAACGCCGACCTCTTCGGATTATAAGA
TTCCGTTGGTGGAACACTGTCCGCCGGCGCCTAGAAGACCGAAACCGATCTCGTTGTCGAGAACGTCACCGAGAGTTTCCGGCGTTCGTAGAGGTTTCAGAGTGTATATC
TCAGACGAAATCGTTGATTCGATCTTCTCGTCTAGTTTCGGCTCCGATTTTCTGCAACACAAGAACAAGAAAGCTCGGAAGGACGATCATGGCGGTAGAGTCGAATTTCT
CGTCCAGTTTCGACTCCGATTTGCTGCACCAGAAGACAGAAAGTTCGGAAAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCACAATTCCGAGAAATCTCCCTCACACCAGAATCATTCCGCGTCAAATTGGAGGATGCGGACCAGATCGAGTTCATTTTCGCCGTAGAAAATCGTCCTCTCGC
ATCGGAATCTCAACAACGCTGCGATTCCTCCGCTCCAGAAGAGTCGTTGTTGATCTCCGCTGTGGACGACGAGGACGGTTTCAGAACGCCGACCTCTTCGGATTATAAGA
TTCCGTTGGTGGAACACTGTCCGCCGGCGCCTAGAAGACCGAAACCGATCTCGTTGTCGAGAACGTCACCGAGAGTTTCCGGCGTTCGTAGAGGTTTCAGAGTGTATATC
TCAGACGAAATCGTTGATTCGATCTTCTCGTCTAGTTTCGGCTCCGATTTTCTGCAACACAAGAACAAGAAAGCTCGGAAGGACGATCATGGCGGTAGAGTCGAATTTCT
CGTCCAGTTTCGACTCCGATTTGCTGCACCAGAAGACAGAAAGTTCGGAAAAGGCTGA
Protein sequenceShow/hide protein sequence
MASQFREISLTPESFRVKLEDADQIEFIFAVENRPLASESQQRCDSSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVSGVRRGFRVYI
SDEIVDSIFSSSFGSDFLQHKNKKARKDDHGGRVEFLVQFRLRFAAPEDRKFGKG