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CmoCh07G010540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLegume-specific protein
Genome locationCmo_Chr07:5368681..5368932
RNA-Seq ExpressionCmoCh07G010540
SyntenyCmoCh07G010540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGS78078.1 legume-specific protein [Aeschynomene sp. CPI104040]4.3e-0753.85Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          S+S+ +SSSSSS + +I  SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP

AVX32585.1 legume-specific protein [Aeschynomene sp. (328)]4.3e-0753.85Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          S+S+  SSSSSS + +I  SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP

KAG6595338.1 hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3493.18Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGA-----SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
        MEGLIPFVYKAIVEFRNGNN+QTMWCCDSPSSASYQRLPGDDDELHNINGA     SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGA-----SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT

KAG7027348.1 hypothetical protein SDJN02_11360, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3489.25Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGA----------SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
        MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGA          SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGA----------SSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT

KGN54276.1 hypothetical protein Csa_018169 [Cucumis sativus]9.6e-0746.15Show/hide
Query:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNIN-----GASSSSSSSSSSSSDSVLISGSGVDQS
        MEGLIPF+YKAI++++NGN   NN  M      W CD+     PSS+S     Y RL GDD +  N N       SSSSSSS+ + + SV+IS +   QS
Subjt:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNIN-----GASSSSSSSSSSSSDSVLISGSGVDQS

Query:  PLCN
        PLC+
Subjt:  PLCN

TrEMBL top hitse value%identityAlignment
A0A0A0L2A8 Uncharacterized protein4.6e-0746.15Show/hide
Query:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNIN-----GASSSSSSSSSSSSDSVLISGSGVDQS
        MEGLIPF+YKAI++++NGN   NN  M      W CD+     PSS+S     Y RL GDD +  N N       SSSSSSS+ + + SV+IS +   QS
Subjt:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNIN-----GASSSSSSSSSSSSDSVLISGSGVDQS

Query:  PLCN
        PLC+
Subjt:  PLCN

A0A2R4NA37 Legume-specific protein2.1e-0753.85Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          S+S+  SSSSSS + +I  SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP

S5VRI4 Legume-specific protein4.6e-0755.42Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELH-----NINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          + +  SS+S+SSSSSSS  VL+S SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELH-----NINGASSSSSSSSSSSSDSVLISGSGVDQSP

S5VRI7 Legume-specific protein4.6e-0755.42Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELH-----NINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          + +  SS+S+SSSSSSS  VL+S SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELH-----NINGASSSSSSSSSSSSDSVLISGSGVDQSP

S5WCG5 Legume-specific protein2.1e-0753.85Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          S+S+ +SSSSSS + +I  SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37750.1 unknown protein2.5e-0539.02Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDEL----HNINGASSSSSSSSSSSSDSVLISGSGVDQSPL
        MEGLIP VYKA+++ R GN +Q +      SS+ Y RLPGD         +++G  S+SS+ +SSS+ +   +     QSP+
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDEL----HNINGASSSSSSSSSSSSDSVLISGSGVDQSPL

AT5G02090.1 unknown protein1.6e-0452.27Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCD--SPSSAS-YQRLPGD
        MEGLIPF+YKAIV ++   +  ++   D  SPS+A  Y RLPGD
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCD--SPSSAS-YQRLPGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAAACCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAG
ACTCCCAGGCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCGAGTGACAGTGTCTTAATTTCTGGCTCTGGGGTTG
ATCAATCGCCGCTGTGTAATGGAGGAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAAACCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAG
ACTCCCAGGCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCGAGTGACAGTGTCTTAATTTCTGGCTCTGGGGTTG
ATCAATCGCCGCTGTGTAATGGAGGAACATAG
Protein sequenceShow/hide protein sequence
MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT