; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G010830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription termination/antitermination protein NusG
Genome locationCmo_Chr07:5622947..5626415
RNA-Seq ExpressionCmoCh07G010830
SyntenyCmoCh07G010830
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR005824 - KOW
IPR006645 - NusG, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR036735 - NusG, N-terminal domain superfamily
IPR043425 - NusG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595370.1 hypothetical protein SDJN03_11923, partial [Cucurbita argyrosperma subsp. sororia]7.1e-17599.38Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLET+LDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_022931956.1 uncharacterized protein LOC111438223 [Cucurbita moschata]8.4e-176100Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_022966103.1 uncharacterized protein LOC111465889 [Cucurbita maxima]1.8e-17097.52Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MAC LLTWTTL LRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYL+KL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEK+KEQAPNPSVLET LDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLV LDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_023518856.1 uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo]7.4e-17298.14Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWT LPLRS SFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKE+QERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDI VETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_038880828.1 transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida]3.1e-15488.62Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET--AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYL
        MACGLL W+ + LRS SFP+LSFSLSS  RTQLSISA +ET  AADD+ QLSARERR+LRNERRE K TTNWREEVEERLCKKPKKEFA WTEKLNLDYL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET--AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYL

Query:  AKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKR
        +KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKA+FPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKR
Subjt:  AKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKR

Query:  QINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKV
        QINKPKPVS+ DMEAIFKEAKEEQERHDQAFLEKE+++APN S LETDLDTNGTTATK KGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS KV
Subjt:  QINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKV

Query:  TVGFTLFGKETLVELDIGDIIVETK
        TVGFTLFGKETLV+LDIGDIIVETK
Subjt:  TVGFTLFGKETLVELDIGDIIVETK

TrEMBL top hitse value%identityAlignment
A0A0A0KZV1 NGN domain-containing protein3.7e-15387.12Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY
        MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+LRNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDY
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVR QEIVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK
        RQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+APN S L+TDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK

Query:  VTVGFTLFGKETLVELDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVELDIGDIIVETK

A0A1S3BKU2 transcription termination/antitermination protein NusG3.2e-15287.73Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY
        MA GLL W+ + L S S P+LSFSLSSS RTQLSISA++ET   AADDV QLSAR+RR+LRNERRE K TTNWREEVEERLC+KPKKEFA WTEKLNLDY
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK
        RQINKPKPVS+ DMEAIFKEAKEEQERHDQAFLEKE+E+APN S L+TDLDTNGTTATKHKGR KKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK

Query:  VTVGFTLFGKETLVELDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVELDIGDIIVETK

A0A6J1DDH4 uncharacterized protein LOC1110194928.6e-15087.62Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLA
        MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRNERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLA
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLA

Query:  KLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVT
        INKPKPVS+ DMEAIFKEAKEEQERHDQ FLEKE+E+APN ++ +TDLDTNGTTATK KGR KKAVN LSPGSTVRV+SGTFAEFEGSLKK+NRKS KVT
Subjt:  INKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVT

Query:  VGFTLFGKETLVELDIGDIIVET
        VGFTLFGKETLV+LDIGDI+VET
Subjt:  VGFTLFGKETLVELDIGDIIVET

A0A6J1EV13 uncharacterized protein LOC1114382234.1e-176100Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

A0A6J1HQX6 uncharacterized protein LOC1114658898.8e-17197.52Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MAC LLTWTTL LRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYL+KL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEK+KEQAPNPSVLET LDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLV LDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

SwissProt top hitse value%identityAlignment
P65591 Transcription termination/antitermination protein NusG7.5e-1023.39Show/hide
Query:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V +   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTV
        N+P P+SQ + E I ++         Q  +EK     P P V                            G  VRV+ G FA+F G +++VN +  K+ V
Subjt:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTV

Query:  GFTLFGKETLVELDIGDI
           +FG+ET VEL+   +
Subjt:  GFTLFGKETLVELDIGDI

P65592 Transcription termination/antitermination protein NusG7.5e-1023.39Show/hide
Query:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V +   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTV
        N+P P+SQ + E I ++         Q  +EK     P P V                            G  VRV+ G FA+F G +++VN +  K+ V
Subjt:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTV

Query:  GFTLFGKETLVELDIGDI
           +FG+ET VEL+   +
Subjt:  GFTLFGKETLVELDIGDI

Q06795 Transcription termination/antitermination protein NusG2.9e-0927.81Show/hide
Query:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLE
        D  F++  P   E+  +KNG   V  K VFPG V +  +M  +    +R   GV GFVG+         +KP P+   + E I K    ++ + D  F  
Subjt:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLE

Query:  KEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI
        KE                                       TV+V  G FA F GS+++++    KV V   +FG+ET VEL+   I
Subjt:  KEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI

Q8DD25 Transcription termination/antitermination protein NusG6.4e-0925.25Show/hide
Query:  RLARSLARNYPDLDFKIYYPSV----HEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFK
        R+A+SL  +      + Y+  V     E  +++ G      +  FPG V ++ IMN E    +R    V GF+G          ++P P+S  + +AI  
Subjt:  RLARSLARNYPDLDFKIYYPSV----HEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFK

Query:  EAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIG
                     LEK  E AP P  +                           G  VRV+ G FA+F G++++V+ +  ++ V  ++FG+ T VEL+ G
Subjt:  EAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIG

Query:  DI
         +
Subjt:  DI

Q9KGE7 Transcription termination/antitermination protein NusG8.3e-0923.26Show/hide
Query:  WWVMRVSRVRGQEIVERLARSL-ARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP
        W+V+        ++   L + + + +  D  F++  P V E+ ++KNG      + VFPG V +  +M  +    +R   GV GFVG+         +KP
Subjt:  WWVMRVSRVRGQEIVERLARSL-ARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP

Query:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFT
         P+  ++++AI ++   ++ER                  +E D                          +V+V  G FA F G+++++    +K+ V   
Subjt:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFT

Query:  LFGKETLVELDIGDI
        +FG+ET VEL+   I
Subjt:  LFGKETLVELDIGDI

Arabidopsis top hitse value%identityAlignment
AT3G09210.1 plastid transcriptionally active 135.8e-9055.03Show/hide
Query:  GLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKT-TNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGP
        GLL W+    RS   PS+   ++   +TQ SI+A +    +   QL+A+ERR+LRNERRE+K   +WREEVEE+L KKPKK +A WTE+LNLD LA+ GP
Subjt:  GLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKT-TNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGP

Query:  QWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP
        QWW +RVSR+RG E  + LAR+LAR +P+++F +Y PSV  KRKLKNGS +VKPK VFPG +FIRCI+NKE+HD IR+ DGVGGF+G+KVGNTKRQINKP
Subjt:  QWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP

Query:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQ-------------APNPSVLETDLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAE
        +PV   D+EAIFK+AKE QE+ D  F E ++ +               N  V+ET  ++         T AT+ K + KK    L+ GSTVRV SGTFAE
Subjt:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQ-------------APNPSVLETDLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAE

Query:  FEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVE
        F G+LKK+NRK+ K TVGFTLFGKETLVE+DI +++ E
Subjt:  FEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCGGGCTTCTGACTTGGACTACACTTCCTCTTCGCTCTCCCTCTTTCCCTTCCCTTTCCTTCTCTCTCTCTTCTTCCCTGCGCACCCAATTATCAATCTCTGC
CGCCCTCGAAACTGCCGCTGATGATGTCCTGCAGCTGTCGGCGCGGGAGAGGAGGAGGCTGAGGAACGAAAGGAGAGAGACGAAAACCACTAATTGGAGGGAAGAGGTGG
AAGAGAGGCTCTGCAAGAAGCCGAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTCGATTACCTTGCTAAATTAGGTCCTCAATGGTGGGTTATGCGGGTCTCT
CGTGTTAGAGGCCAAGAAATTGTCGAACGCCTCGCTCGTTCTCTTGCTAGGAACTATCCTGACCTCGATTTCAAGATATATTACCCGTCTGTCCATGAGAAGAGGAAATT
AAAGAACGGTTCTTACACGGTTAAACCGAAAGCGGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATGCATGACTTCATTAGAGAGTGTGATGGAG
TTGGAGGCTTTGTTGGTGCGAAGGTCGGAAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTCAAGACGACATGGAAGCAATTTTTAAAGAGGCAAAGGAAGAG
CAAGAAAGACATGACCAAGCTTTTCTAGAGAAAGAGAAAGAGCAAGCTCCGAACCCCAGCGTGCTCGAGACTGACTTAGATACTAACGGTACTACTGCCACAAAGCACAA
AGGAAGACCTAAAAAAGCTGTTAATACTTTATCTCCGGGGTCAACCGTTCGGGTGTCATCCGGGACTTTTGCAGAATTCGAAGGCTCTCTTAAGAAAGTGAACCGTAAGA
GTAAAAAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGAGCTTGACATTGGTGATATTATAGTTGAGACGAAATGA
mRNA sequenceShow/hide mRNA sequence
TGGGAGTCGCAATAACACCACCTATCGCCGTTATCATCACTGGTGGCTCCACACCCGAACCAGTAATCGAAAACTGGTTCCTGTGAAGACGATGGCCTGCGGGCTTCTGA
CTTGGACTACACTTCCTCTTCGCTCTCCCTCTTTCCCTTCCCTTTCCTTCTCTCTCTCTTCTTCCCTGCGCACCCAATTATCAATCTCTGCCGCCCTCGAAACTGCCGCT
GATGATGTCCTGCAGCTGTCGGCGCGGGAGAGGAGGAGGCTGAGGAACGAAAGGAGAGAGACGAAAACCACTAATTGGAGGGAAGAGGTGGAAGAGAGGCTCTGCAAGAA
GCCGAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTCGATTACCTTGCTAAATTAGGTCCTCAATGGTGGGTTATGCGGGTCTCTCGTGTTAGAGGCCAAGAAA
TTGTCGAACGCCTCGCTCGTTCTCTTGCTAGGAACTATCCTGACCTCGATTTCAAGATATATTACCCGTCTGTCCATGAGAAGAGGAAATTAAAGAACGGTTCTTACACG
GTTAAACCGAAAGCGGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATGCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGC
GAAGGTCGGAAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTCAAGACGACATGGAAGCAATTTTTAAAGAGGCAAAGGAAGAGCAAGAAAGACATGACCAAG
CTTTTCTAGAGAAAGAGAAAGAGCAAGCTCCGAACCCCAGCGTGCTCGAGACTGACTTAGATACTAACGGTACTACTGCCACAAAGCACAAAGGAAGACCTAAAAAAGCT
GTTAATACTTTATCTCCGGGGTCAACCGTTCGGGTGTCATCCGGGACTTTTGCAGAATTCGAAGGCTCTCTTAAGAAAGTGAACCGTAAGAGTAAAAAGGTAACTGTGGG
ATTCACACTATTTGGGAAGGAAACCCTTGTAGAGCTTGACATTGGTGATATTATAGTTGAGACGAAATGAGTGAATGTACTTTCTCGTCGATGGTAAGTTTTCGAAATCA
CAAGGCACCATTTATCTTATCAACTCGAGCTGTATCATAGGTTTTTTTTCTTCAACTTTGATGGAAAGTTCAGTGCCTCTTGGTATAATCAGTCAAAAAACCACACCCTG
TTTCCTGTTCCATAAAGTACCAAGTGGTGAACAGAGGAGCTATCTAACCATTAGCCTTAATCAATTCATAATTTTCCTAAGAACTTGCAAGGATCTTCTTTGGTTCTTCC
AATTATTCAACTCACTGTGAACAACCTTGATTTTGTCCCTTCAATTATGGCCTTTATTGCAACAGAGTAAACCACCATGGGTTGGTCTAGTTGGTCTAGTGGTCGGGTCA
AGTAAATAATATAAGGCTTTTAGAGAATGAGTTCATGACACGGATTAATATCCTACGAGTTATCTTGACAATCAAATGTAGTAAGATCAAATGACCTGTGAGAATAGC
Protein sequenceShow/hide protein sequence
MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVS
RVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEE
QERHDQAFLEKEKEQAPNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVETK