; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G010930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr07:5721158..5722729
RNA-Seq ExpressionCmoCh07G010930
SyntenyCmoCh07G010930
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]6.4e-15193.64Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSF+GTRLA++  SSGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]2.2e-15194.35Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLA++  SSGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLT LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022931964.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]5.2e-161100Show/hide
Query:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
        VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
Subjt:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF

Query:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
Subjt:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

XP_022966541.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]2.6e-16099.65Show/hide
Query:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKK PSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
        VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
Subjt:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF

Query:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
Subjt:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]6.4e-15193.64Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLA++R  SGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic3.1e-15193.64Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSF+GTRLA++  SSGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic1.1e-15194.35Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLA++  SSGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLT LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic1.1e-15194.35Show/hide
Query:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRLA++  SSGRVQARF FGKKKSP KK PSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR
        GD+IGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLT LIWIEVLVIGYIEFQR
Subjt:  GDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQR

Query:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1EVQ5 Chlorophyll a-b binding protein, chloroplastic2.5e-161100Show/hide
Query:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
        VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
Subjt:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF

Query:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
Subjt:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

A0A6J1HPL7 Chlorophyll a-b binding protein, chloroplastic1.3e-16099.65Show/hide
Query:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKK PSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
        VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF
Subjt:  VAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEF

Query:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
Subjt:  QRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic7.6e-3841.2Show/hide
Query:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALT
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALT

Query:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ +L  ++ IE L I ++E QR+ E +PEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.1e-13281.03Show/hide
Query:  MAATS---AATSSFIGTRLA-DVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAATS   AA SS +GTR+A  +   SGR  A F FGKKK+  KK        DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAATS---AATSSFIGTRLA-DVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIG
        LAKN+AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFS++ LIWIEVLVIG
Subjt:  LAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIG

Query:  YIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        YIEFQRNAEL+ EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  YIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

Q93WD2 Chlorophyll a-b binding protein CP291.2e-6459.36Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIG-TRFENSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGA
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +    +    EV S     PY+EVFGL RFRECELIHGRWAMLA LGA
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIG-TRFENSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGA

Query:  LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHARLAMVAF
        L  E  TGV+W +AGKVEL +G+SY G  LPFS+T LIWIEV+++G  EF RN+E  PEKR YPGG  FDPL LA + E++A  L+ AEIKHARLAMV+F
Subjt:  LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHARLAMVAF

Query:  LGFAVQAAVTGKGPLNNWA
         G+ VQA  TG+G L + A
Subjt:  LGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic2.0e-11074.44Show/hide
Query:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        T+AA S   G R+ D R  +GRVQAR  FSFGKKK   P KK    +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIE
        NVAGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFSLT LIWIEVLV+GYIE
Subjt:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIE

Query:  FQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+EL+PEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic5.3e-13282.01Show/hide
Query:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAATS  AA SS +GTR ++D+ S+S R  ARF FG KK+  KK  +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGY
        AKN+ G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFS++ LIWIEVLVIGY
Subjt:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGY

Query:  IEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        IEFQRNAEL+ EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  IEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II1.4e-11174.44Show/hide
Query:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        T+AA S   G R+ D R  +GRVQAR  FSFGKKK   P KK    +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIE
        NVAGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFSLT LIWIEVLV+GYIE
Subjt:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIE

Query:  FQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+EL+PEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II4.8e-6471.01Show/hide
Query:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        T+AA S   G R+ D R  +GRVQAR  FSFGKKK   P KK    +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TSAATSSFIGTRLADVRSSSGRVQAR--FSFGKKK--SPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE
        NVAGD+IG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVE
Subjt:  NVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II2.9e-6972.97Show/hide
Query:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAATS  AA SS +GTR ++D+ S+S R  ARF FG KK+  KK  +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        AKN+ G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II3.8e-13382.01Show/hide
Query:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL
        MAATS  AA SS +GTR ++D+ S+S R  ARF FG KK+  KK  +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNL
Subjt:  MAATS--AATSSFIGTR-LADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL

Query:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGY
        AKN+ G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFS++ LIWIEVLVIGY
Subjt:  AKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGY

Query:  IEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        IEFQRNAEL+ EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  IEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

AT5G01530.1 light harvesting complex photosystem II7.6e-13481.03Show/hide
Query:  MAATS---AATSSFIGTRLA-DVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAATS   AA SS +GTR+A  +   SGR  A F FGKKK+  KK        DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAATS---AATSSFIGTRLA-DVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIG
        LAKN+AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFS++ LIWIEVLVIG
Subjt:  LAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIG

Query:  YIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        YIEFQRNAEL+ EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  YIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACTTCCGCCGCCACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGTCAAGTTCCGGCCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAG
CCCGGCGAAGAAATTGCCTTCGTCAAAGCAGATTCCCGACCGACCTCTATGGTTCCCCGGAGCCAAGGCGCCGGAATGGCTCGACGGAAGCTTGGTCGGCGACTACGGAT
TCGATCCGTTCGGATTGGGGAAACCAGCAGAGTATCTGCAATACGATTTGGACTCGTTGGATCAGAATCTGGCGAAGAATGTGGCTGGAGATCTAATAGGGACGAGATTT
GAGAACTCCGAAGTAAAATCGACGCCGTTTCAACCGTACACGGAGGTTTTTGGGTTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGATGGGCAATGCTAGCAAC
CCTCGGCGCTCTCACCGTTGAATGGCTCACCGGCGTCACTTGGCAAGACGCTGGAAAGGTAGAATTGGTGGAAGGGTCATCGTACCTCGGGCAGCCGCTTCCGTTCTCGC
TCACGGCATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCGGAGCTAGAGCCGGAGAAGAGATTGTACCCTGGAGGGAAGTTTTTCGAC
CCGCTGGGGTTGGCGGAGGATCCGGAGAAGAAAGCTGTTCTTCAACTGGCTGAGATCAAACACGCTCGCCTCGCCATGGTTGCCTTCCTTGGGTTCGCTGTTCAAGCTGC
TGTGACGGGGAAAGGGCCGCTCAATAACTGGGCCACCCATCTCAGCGACCCCCTCCACACCACCATCATTGACAACTTCTCCTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
AAACCACATAAAATCCGAACCACAATCCCTACTTCCATCTCATTCTCCTTCCTCAATCCCCCGTTCTCGACTCGCCGTCGTAATGGCCGCCACTTCCGCCGCCACCTCCT
CCTTCATCGGAACACGCCTCGCCGACGTGCGGTCAAGTTCCGGCCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAGCCCGGCGAAGAAATTGCCTTCGTCAAAG
CAGATTCCCGACCGACCTCTATGGTTCCCCGGAGCCAAGGCGCCGGAATGGCTCGACGGAAGCTTGGTCGGCGACTACGGATTCGATCCGTTCGGATTGGGGAAACCAGC
AGAGTATCTGCAATACGATTTGGACTCGTTGGATCAGAATCTGGCGAAGAATGTGGCTGGAGATCTAATAGGGACGAGATTTGAGAACTCCGAAGTAAAATCGACGCCGT
TTCAACCGTACACGGAGGTTTTTGGGTTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGATGGGCAATGCTAGCAACCCTCGGCGCTCTCACCGTTGAATGGCTC
ACCGGCGTCACTTGGCAAGACGCTGGAAAGGTAGAATTGGTGGAAGGGTCATCGTACCTCGGGCAGCCGCTTCCGTTCTCGCTCACGGCATTGATCTGGATCGAAGTTCT
GGTGATCGGATACATCGAGTTTCAGAGGAACGCGGAGCTAGAGCCGGAGAAGAGATTGTACCCTGGAGGGAAGTTTTTCGACCCGCTGGGGTTGGCGGAGGATCCGGAGA
AGAAAGCTGTTCTTCAACTGGCTGAGATCAAACACGCTCGCCTCGCCATGGTTGCCTTCCTTGGGTTCGCTGTTCAAGCTGCTGTGACGGGGAAAGGGCCGCTCAATAAC
TGGGCCACCCATCTCAGCGACCCCCTCCACACCACCATCATTGACAACTTCTCCTCTTCCTAACCTCTTCTCTACTTCCTAAACAATGCCATGACTTTGTAACTACTTTC
ATTCCAAATTCGTATGTCAAATTATATTGATAACTTGTCCGGACCCAAAAAAAAAAATTAACCTTAAGTCGTGACTAACAAGGACTGTATGCAAGAAATACAAAGGAAAA
CATTATTTAAAAAATGAATAATTTATTTCGTAAGAAA
Protein sequenceShow/hide protein sequence
MAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKLPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIGTRF
ENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFD
PLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS