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CmoCh07G010970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein-serine/threonine phosphatase
Genome locationCmo_Chr07:5745067..5747155
RNA-Seq ExpressionCmoCh07G010970
SyntenyCmoCh07G010970
Gene Ontology termsGO:0070940 - dephosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008420 - RNA polymerase II CTD heptapeptide repeat phosphatase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595385.1 hypothetical protein SDJN03_11938, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1960.42Show/hide
Query:  RSFLCLLTALRKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKGCINSRSLAPKRSKARERERVHTSSRLRKQTTEEFIQKYCEYKKRR
        RSFLCLLTALRKFDDGLQEQYEKKYDPA+QNSFESGSTAKVGPDLMLKGKG   +  +  +R K +  + +    R RK    + IQ++ + K  +
Subjt:  RSFLCLLTALRKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKGCINSRSLAPKRSKARERERVHTSSRLRKQTTEEFIQKYCEYKKRR
KAG7027393.1 hypothetical protein SDJN02_11405, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-0596.55Show/hide
Query:  KFDDGLQEQYEKKYDPAEQNSFESGSTAK
        KFDDGLQEQYEKKYDPA+QNSFESGSTAK
Subjt:  KFDDGLQEQYEKKYDPAEQNSFESGSTAK
XP_022966542.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1 [Cucurbita maxima]1.8e-0782.93Show/hide
Query:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
        RKFDD  QEQYEKK+DP +QNSFESG TAKVG DLMLKGKG
Subjt:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
XP_022966543.1 RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2 [Cucurbita maxima]1.8e-0782.93Show/hide
Query:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
        RKFDD  QEQYEKK+DP +QNSFESG TAKVG DLMLKGKG
Subjt:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
TrEMBL top hitse value%identityAlignment
A0A6J1HN94 Protein-serine/threonine phosphatase8.9e-0882.93Show/hide
Query:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
        RKFDD  QEQYEKK+DP +QNSFESG TAKVG DLMLKGKG
Subjt:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
A0A6J1HSG0 Protein-serine/threonine phosphatase8.9e-0882.93Show/hide
Query:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
        RKFDD  QEQYEKK+DP +QNSFESG TAKVG DLMLKGKG
Subjt:  RKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTTTGGAGACAGATTTTGTTTTGTAACCCAGGCCCCTCCCACCCTATACAATGTACACTGCAACCGGAGCTTTCTGTGCCTCCTAACGGCCTTGAGGAAATT
TGACGATGGATTACAGGAGCAATATGAAAAGAAATATGATCCAGCAGAGCAAAACAGTTTTGAAAGCGGGTCAACTGCCAAAGTCGGACCGGATCTAATGCTGAAAGGAA
AAGGATGCATCAATAGTCGGAGTTTAGCTCCGAAAAGGTCAAAAGCAAGAGAAAGGGAGAGAGTACATACTTCGAGTAGACTGAGAAAGCAAACAACTGAAGAATTCATA
CAAAAATATTGCGAATATAAGAAGCGGAGGTACCTTCTGGATTTAGAAAACAAATTTCAAACAAACAAACAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTTTGGAGACAGATTTTGTTTTGTAACCCAGGCCCCTCCCACCCTATACAATGTACACTGCAACCGGAGCTTTCTGTGCCTCCTAACGGCCTTGAGGAAATT
TGACGATGGATTACAGGAGCAATATGAAAAGAAATATGATCCAGCAGAGCAAAACAGTTTTGAAAGCGGGTCAACTGCCAAAGTCGGACCGGATCTAATGCTGAAAGGAA
AAGGATGCATCAATAGTCGGAGTTTAGCTCCGAAAAGGTCAAAAGCAAGAGAAAGGGAGAGAGTACATACTTCGAGTAGACTGAGAAAGCAAACAACTGAAGAATTCATA
CAAAAATATTGCGAATATAAGAAGCGGAGGTACCTTCTGGATTTAGAAAACAAATTTCAAACAAACAAACAGAACTAG
Protein sequenceShow/hide protein sequence
MFIFGDRFCFVTQAPPTLYNVHCNRSFLCLLTALRKFDDGLQEQYEKKYDPAEQNSFESGSTAKVGPDLMLKGKGCINSRSLAPKRSKARERERVHTSSRLRKQTTEEFI
QKYCEYKKRRYLLDLENKFQTNKQN