; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G010980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G010980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S31, chloroplastic-like
Genome locationCmo_Chr07:5746107..5747765
RNA-Seq ExpressionCmoCh07G010980
SyntenyCmoCh07G010980
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]4.8e-4482.64Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+      S  SSPSSIPAVYCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]3.2e-4887.6Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST---GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPR
        MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST    TSATSSPSS+PAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPR
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST---GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPR

Query:  KDKFDDDEKIKIEIDESLFSR
        KDKF+DDEKIKIEID+SLF+R
Subjt:  KDKFDDDEKIKIEIDESLFSR

XP_022931892.1 30S ribosomal protein S31, chloroplastic-like [Cucurbita moschata]1.9e-56100Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDDEKIKIEIDESLFSR
        FDDDEKIKIEIDESLFSR
Subjt:  FDDDEKIKIEIDESLFSR

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]9.3e-5699.15Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTG SATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDDEKIKIEIDESLFSR
        FDDDEKIKIEIDESLFSR
Subjt:  FDDDEKIKIEIDESLFSR

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]8.7e-4685.95Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR S+     TS TSSPSSIPAVYCGRGDKKTEKGKRF  S+GNARPR+KTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKF+DDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

TrEMBL top hitse value%identityAlignment
A0A1S3BL51 30S ribosomal protein S31, chloroplastic2.3e-4482.64Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+      S  SSPSSIPAVYCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

A0A5A7TU27 30S ribosomal protein S312.3e-4482.64Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQA  QSP+L+P  FSFSKSETLGTSLR S+      S  SSPSSIPAVYCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST----GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDDEKIKIEIDESLFS
        RKDKFDDDEKIKIEIDESLF+
Subjt:  RKDKFDDDEKIKIEIDESLFS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic1.6e-4887.6Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST---GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPR
        MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST    TSATSSPSS+PAVYCGRGDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPR
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTST---GTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPR

Query:  KDKFDDDEKIKIEIDESLFSR
        KDKF+DDEKIKIEID+SLF+R
Subjt:  KDKFDDDEKIKIEIDESLFSR

A0A6J1EV33 30S ribosomal protein S31, chloroplastic-like9.1e-57100Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDDEKIKIEIDESLFSR
        FDDDEKIKIEIDESLFSR
Subjt:  FDDDEKIKIEIDESLFSR

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic9.1e-57100Show/hide
Query:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDDEKIKIEIDESLFSR
        FDDDEKIKIEIDESLFSR
Subjt:  FDDDEKIKIEIDESLFSR

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic3.8e-2871.88Show/hide
Query:  SFSKSETLGTSLR--TSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS
        S S SET G SL   T   + +TSS SSIP VYCGRGD+KT KGKRF HSFGNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLFS
Subjt:  SFSKSETLGTSLR--TSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS

P47909 30S ribosomal protein S31, mitochondrial3.5e-0563.04Show/hide
Query:  AVYCGRGDKKTEKGKRFKHSFGNARP-RDKTKGRGTPRVPTPPSPP
        AV CGRGDKKT++GKRFK S+GNARP R+K   R   RV  P S P
Subjt:  AVYCGRGDKKTEKGKRFKHSFGNARP-RDKTKGRGTPRVPTPPSPP

P47910 30S ribosomal protein S31, chloroplastic1.3e-1253.57Show/hide
Query:  FSFSKSETL-GTSLRTSTGTSATSSPSSIPA---VYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFD
        FSFS S+++ G SL +    S +SS S+ PA   +YCGRGD+KT KGKRF HSFGNARP++K KGRG P+ P  P      K D
Subjt:  FSFSKSETL-GTSLRTSTGTSATSSPSSIPA---VYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFD

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein6.8e-0442.86Show/hide
Query:  SETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNAR-PRDKTKGRGTPRVPTPPSPP
        S  L  S R S+ + A ++P+      CGRGDKKT+KGKRFK S+GN+R  + K   R   ++  P S P
Subjt:  SETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNAR-PRDKTKGRGTPRVPTPPSPP

AT2G38140.1 plastid-specific ribosomal protein 42.7e-2971.88Show/hide
Query:  SFSKSETLGTSLR--TSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS
        S S SET G SL   T   + +TSS SSIP VYCGRGD+KT KGKRF HSFGNARPR+K+KGRG  RVP PP+PPRKDKF++DEKIKI+IDESLFS
Subjt:  SFSKSETLGTSLR--TSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACTTCCTTTCGGACTTCTTCAGGCAACATTTCAATCTCCTACTCTTTCTCCTCGTTGTTTCTCCTTCTCCAAATCCGAAACCCTAGGAACCTCTCTGCGTAC
TTCTACTGGAACCTCTGCAACTTCCTCGCCTTCTTCAATTCCCGCCGTGTATTGTGGCAGAGGCGATAAGAAGACGGAGAAAGGAAAGCGGTTCAAACACTCATTCGGAA
ATGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACACCAAGAGTACCAACTCCACCTTCTCCGCCTAGAAAGGATAAGTTTGACGACGATGAGAAAATCAAGATCGAA
ATCGACGAGTCTCTTTTCTCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
AATCCGTCACGGTCTCCACTCGAAACTTATCTTCGTGATTCTCTCACAGACGCTCTCGTTCACTCTGCTTCATCTTCATCCGTCCATGGCTTCACTTCCTTTCGGACTTC
TTCAGGCAACATTTCAATCTCCTACTCTTTCTCCTCGTTGTTTCTCCTTCTCCAAATCCGAAACCCTAGGAACCTCTCTGCGTACTTCTACTGGAACCTCTGCAACTTCC
TCGCCTTCTTCAATTCCCGCCGTGTATTGTGGCAGAGGCGATAAGAAGACGGAGAAAGGAAAGCGGTTCAAACACTCATTCGGAAATGCAAGGCCTCGGGACAAGACGAA
AGGGAGAGGGACACCAAGAGTACCAACTCCACCTTCTCCGCCTAGAAAGGATAAGTTTGACGACGATGAGAAAATCAAGATCGAAATCGACGAGTCTCTTTTCTCTCGCT
AGTCAAGGAGCAGCCTAGTTCTGTTTGTTTGTTTGAAATTTGTTTTCTAAATCCAGAAGGTACCTCCGCTTCTTATATTCGCAATATTTTTGTATGAATTCTTCAGTTGT
TTGCTTTCTCAGTCTACTCGAAGTATGTACTCTCTCCCTTTCTCTTGCTTTTGACCTTTTCGGAGCTAAACTCCGACTATTGATGCTTCATAGGTGATCTTTGCGTCATT
AGCAGGCAATTGTTGAAATATATGTTTGCTTCCTCCTCCATGTTATCGAAGGCACTAGAGTTGAGCTATTCTAGACCAACGTTAGATACAAAAAGAATCTACTAGCTCCT
TTCTGGTTTTACGAATTTCTTTCCGATTGTTGCCGTTGTATGGAAGCGTCAATTGCTTGTTTATCTACAAAGTTTTAAGCGGACTTTGGGAAGATTTATCCAAAATTTTC
TCTGTAATAGGCTAATACGGATCACTTACTTTAATGACTACATAACCGTAAAAATATAAGCTCCAATTGGAGCATTGTTCATCCGATGGTTGATCACTTCACTTCGCAAT
CATTGAACTAAAAACAAAAAAAAGTTACAGAAATATAGACAAAAAGTAGTTGCGTAGCGTCCTTGGATAGGCTGTTTTCTACTACAAAATAAACTATTTTTCTTAACTCA
ATTTCAGCCACCTATGTTGCCTTTTATTCTGAATGTTTTGGAGGTTCTACCGTCTCTCTACAAAGAGAGTTTCTCCTGATGTCAACCAAAGCCTTTTATTGTCAATGCCA
AGGGTAACTGAAGAGGAGGAGGAAGAAGAAGAGGTACCTAGGTTTATTGGCCCAGAAGACCAAAAAGGAAGGAATCCGACAAATGCTTGAGTCCCAGTTAGTTACTCTTC
TTCTGCATCTTCATGTTCTTCCTCCTCCTCCTCTGTATCATCTTCATGTTCCTCCTCCTCTGCATCATCTTTAAGAAGCAGTAGTTTAGTTTACTAGACTTGATGAAAGA
AGGAAACACCTCTCTCAGTAGATTTATATGACATGAGTAGCTCAATAAGGGTTGGCAAAAGTCGATGACTGGG
Protein sequenceShow/hide protein sequence
MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTGTSATSSPSSIPAVYCGRGDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIE
IDESLFSR