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CmoCh07G011180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G011180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLaccase
Genome locationCmo_Chr07:5896475..5896989
RNA-Seq ExpressionCmoCh07G011180
SyntenyCmoCh07G011180
Gene Ontology termsGO:0046274 - lignin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0005507 - copper ion binding (molecular function)
GO:0052716 - hydroquinone:oxygen oxidoreductase activity (molecular function)
InterPro domainsIPR008972 - Cupredoxin
IPR011707 - Multicopper oxidase, N-termianl
IPR045087 - Multicopper oxidase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027413.1 Laccase-4 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3698.75Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG+IIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

XP_022931959.1 laccase-4-like [Cucurbita moschata]1.5e-36100Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

XP_022966609.1 laccase-4-like [Cucurbita maxima]9.5e-3696.25Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG+IIRVLVLVACIFPAF+ECRV+RYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

XP_023518935.1 laccase-4-like [Cucurbita pepo subsp. pepo]2.5e-3698.75Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG+IIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

XP_023543863.1 laccase-4-like [Cucurbita pepo subsp. pepo]1.5e-3391.25Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG++IRVLVLVACIFPAF+ECRV+ Y F+VVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

TrEMBL top hitse value%identityAlignment
A0A6J1DCH3 Laccase2.8e-3391.25Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG+IIRVLVLVACIFPA +ECRV+ Y FDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVN+VQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

A0A6J1EVQ0 Laccase7.1e-37100Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

A0A6J1GFQ1 Laccase2.4e-3287.5Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG++IRVLVLVACIFPA +ECRV+ Y F+VVLKN+TKLCS+KQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

A0A6J1HUA3 Laccase4.6e-3696.25Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG+IIRVLVLVACIFPAF+ECRV+RYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

A0A6J1IS57 Laccase4.0e-3287.5Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG++IR LVLVACIFPA +ECRV+ Y F+VVLKNTTKLCSSKQIVTVNGKFPGPTIY REDDTVLIKVVNHVQYNLSIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

SwissProt top hitse value%identityAlignment
O80434 Laccase-41.2e-2268.49Show/hide
Query:  LVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        LV    +FPA  E  V+ Y F+VV+KN T+LCSSK  VTVNG++PGPTIYAREDDT+LIKVVNHV+YN+SIHW
Subjt:  LVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

Q0IQU1 Laccase-227.1e-1852.56Show/hide
Query:  IRVLVLVACIFPAFIECR--VQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        + +L++ AC     +      + Y F+VV++N T+LCS+K I+TVNGKFPGPT+YARE D VL+KVVNHV +N++IHW
Subjt:  IRVLVLVACIFPAFIECR--VQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

Q1PDH6 Laccase-164.2e-1857.69Show/hide
Query:  IIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        I +    +   + P  +   ++ Y F+ V+ NTTKLCSSK IVTVNG+FPGPTI ARE DT+LIKVVNHV+YN+SIHW
Subjt:  IIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

Q6ID18 Laccase-105.6e-2364.94Show/hide
Query:  IRVLVLVACI-FPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        IR+LVL A + FPA +   +++YTF+VV K  T++CS+KQIVTVNGKFPGPTIYA EDDT+L+ VVN+V+YN+SIHW
Subjt:  IRVLVLVACI-FPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

Q8VZA1 Laccase-111.9e-1852.5Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG +     L+A +  + ++  V++Y FDV +KN +++C++K IVTVNG FPGPT+YARE D V+I V NHVQYN+SIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

Arabidopsis top hitse value%identityAlignment
AT2G29130.1 laccase 23.6e-1764.91Show/hide
Query:  QRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        + Y FD+ LKN T+LC +K IVTVNGKFPGP + ARE D + IKVVNHV  N+SIHW
Subjt:  QRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

AT2G38080.1 Laccase/Diphenol oxidase family protein8.9e-2468.49Show/hide
Query:  LVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        LV    +FPA  E  V+ Y F+VV+KN T+LCSSK  VTVNG++PGPTIYAREDDT+LIKVVNHV+YN+SIHW
Subjt:  LVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

AT5G01190.1 laccase 104.0e-2464.94Show/hide
Query:  IRVLVLVACI-FPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        IR+LVL A + FPA +   +++YTF+VV K  T++CS+KQIVTVNGKFPGPTIYA EDDT+L+ VVN+V+YN+SIHW
Subjt:  IRVLVLVACI-FPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

AT5G03260.1 laccase 111.3e-1952.5Show/hide
Query:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        MG +     L+A +  + ++  V++Y FDV +KN +++C++K IVTVNG FPGPT+YARE D V+I V NHVQYN+SIHW
Subjt:  MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW

AT5G58910.1 laccase 168.6e-1981.63Show/hide
Query:  LKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW
        + NTTKLCSSK IVTVNG+FPGPTI ARE DT+LIKVVNHV+YN+SIHW
Subjt:  LKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATAATAATTCGAGTTTTGGTTCTCGTGGCCTGTATTTTCCCAGCTTTCATCGAATGCCGAGTTCAACGCTACACGTTTGATGTGGTTTTGAAAAATACTACAAA
ACTATGTTCGAGTAAGCAAATCGTCACGGTTAATGGAAAGTTTCCAGGGCCGACCATCTACGCTAGGGAAGATGACACAGTACTCATTAAGGTTGTTAACCATGTTCAAT
ACAACCTTTCTATTCACTGGTAA
mRNA sequenceShow/hide mRNA sequence
GCTTGTATCCAGTAGAGGGAGAGAAAGAGAGGGGTAAATGGGTATAATAATTCGAGTTTTGGTTCTCGTGGCCTGTATTTTCCCAGCTTTCATCGAATGCCGAGTTCAAC
GCTACACGTTTGATGTGGTTTTGAAAAATACTACAAAACTATGTTCGAGTAAGCAAATCGTCACGGTTAATGGAAAGTTTCCAGGGCCGACCATCTACGCTAGGGAAGAT
GACACAGTACTCATTAAGGTTGTTAACCATGTTCAATACAACCTTTCTATTCACTGGTAA
Protein sequenceShow/hide protein sequence
MGIIIRVLVLVACIFPAFIECRVQRYTFDVVLKNTTKLCSSKQIVTVNGKFPGPTIYAREDDTVLIKVVNHVQYNLSIHW