; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G011290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G011290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionradixin-like isoform X1
Genome locationCmo_Chr07:5935023..5937090
RNA-Seq ExpressionCmoCh07G011290
SyntenyCmoCh07G011290
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595410.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.6e-9091.54Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEE     
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
                    INELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
KAG7027420.1 hypothetical protein SDJN02_11433, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-9091.04Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEE     
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
                    INELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]3.0e-102100Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]1.7e-9493.53Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIE+LLSYG+DLV LLKDQNDVQTLNQCLQHFNALQSS HDD  NVH  VQDYEKKIEECRVKTEEAKARTVADDEMDILEKE+EEE+REEH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLV+NQINELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK SSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]4.7e-10098.01Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQ FNALQSS HDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLV+NQINELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
TrEMBL top hitse value%identityAlignment
A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X23.4e-8082.09Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGK+NIE+LLSYG+DLVALLKDQ DVQTLNQCL+H  ALQS   DD  NVH    +YEKKIE CR KTEEAKARTVAD EMD+LE+E+EEE+R+EH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLV+++INELD QRISVQE+KQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTK S+FDICN IW+MINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
A0A6J1CR83 uncharacterized protein LOC111013852 isoform X12.3e-8484.58Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGK+NIE+LLSYG+DLVALLKDQ DVQTLNQCL+H  ALQS   DD  NVHSSVQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEE+R+EH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLV+++INELD QRISVQE+KQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTK S+FDICN IW+MINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
A0A6J1F034 uncharacterized protein LOC1114381841.4e-102100Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
A0A6J1HU69 uncharacterized protein LOC1114662168.4e-9593.53Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MGDFSGKMNIE+LLSYG+DLV LLKDQNDVQTLNQCLQHFNALQSS HDD  NVH  VQDYEKKIEECRVKTEEAKARTVADDEMDILEKE+EEE+REEH
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIRLV+NQINELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK SSFDICNDIWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
A0A6J1IPN8 uncharacterized protein LOC1114783203.4e-8080.1Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        M DF+GK NIE++LSYGDDLVALL DQNDVQTLNQCL+HF  LQSS  DD  NV SSVQDYEKKIE CR KTEEAKA TVADDE+DILEKE+ EE+ + +
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS
        LLMEEIR+++++IN+LDRQRISVQE+KQA KKLEQQELR QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FE DPT +SSFDICN IWNMINS
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P
SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog8.5e-4444.72Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MG+ S   +IEDL+SYGDDL+ LL  +N    ++Q  + F AL  + H+D   +  S++D + K+  C+ KTEEA +   A+DE++ L+KE++EE+  E 
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMIN
         L +E+RLV++++ +L+ Q  S+ E KQ+TK+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  KM++++ CN IW++IN
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMIN
Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein6.0e-4544.72Show/hide
Query:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH
        MG+ S   +IEDL+SYGDDL+ LL  +N    ++Q  + F AL  + H+D   +  S++D + K+  C+ KTEEA +   A+DE++ L+KE++EE+  E 
Subjt:  MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEH

Query:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMIN
         L +E+RLV++++ +L+ Q  S+ E KQ+TK+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  KM++++ CN IW++IN
Subjt:  LLMEEIRLVSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMIN
AT5G01570.1 unknown protein7.4e-2737.1Show/hide
Query:  NIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEHLLMEEIRL
        N E ++S+GD+L+ +L D+     L Q L+   A+  S  +D + +H S+QD +KK++ C+ KT+EA +    ++E++ L+KE++EE+  E  L EE+  
Subjt:  NIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEHLLMEEIRL

Query:  VSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSS-FDICND
                 R     +E + A K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K +S ++ CN+
Subjt:  VSNQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSS-FDICND

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATTTCTCCGGAAAGATGAACATCGAGGACCTCTTATCTTATGGCGACGATCTGGTGGCTTTATTGAAGGACCAAAACGACGTTCAAACCTTGAATCAATGTCT
CCAACATTTCAACGCCCTTCAATCTTCTTCTCACGATGATTCCCGTAATGTTCACAGCTCAGTTCAAGATTATGAGAAGAAAATCGAGGAATGTCGGGTGAAAACAGAGG
AGGCGAAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTTGAAAAGGAGATCGAAGAGGAAGTTAGGGAAGAACATTTGCTCATGGAGGAGATTAGACTTGTCTCC
AATCAGATTAATGAGCTAGACCGACAAAGGATTTCTGTTCAAGAAAAGAAGCAGGCAACGAAGAAACTTGAACAACAAGAACTTAGGGCGCAGAGGAAGCTTTCAATGTA
TGCATCTGTCACTGATATCATTCCAAACATGGATGATCACTCCAAAATATCTGGCCATATTGTGGATAGAAATAAACGGGTTGTGCAGAAGTTTGAATTGGATCCGACTA
AGATGTCTTCTTTTGATATATGCAATGACATTTGGAATATGATTAATTCCCCATAG
mRNA sequenceShow/hide mRNA sequence
TACTGAGTCTGGACTAGTGGCTCCTGAATTCAAAATTTGTATCATCACATCAATCTTCTCTCCAATCTCGTTGTTGGTTCGTTGTTGATTTAGAGGAATGGGGGATTTCT
CCGGAAAGATGAACATCGAGGACCTCTTATCTTATGGCGACGATCTGGTGGCTTTATTGAAGGACCAAAACGACGTTCAAACCTTGAATCAATGTCTCCAACATTTCAAC
GCCCTTCAATCTTCTTCTCACGATGATTCCCGTAATGTTCACAGCTCAGTTCAAGATTATGAGAAGAAAATCGAGGAATGTCGGGTGAAAACAGAGGAGGCGAAAGCGAG
AACTGTTGCAGATGATGAAATGGATATTCTTGAAAAGGAGATCGAAGAGGAAGTTAGGGAAGAACATTTGCTCATGGAGGAGATTAGACTTGTCTCCAATCAGATTAATG
AGCTAGACCGACAAAGGATTTCTGTTCAAGAAAAGAAGCAGGCAACGAAGAAACTTGAACAACAAGAACTTAGGGCGCAGAGGAAGCTTTCAATGTATGCATCTGTCACT
GATATCATTCCAAACATGGATGATCACTCCAAAATATCTGGCCATATTGTGGATAGAAATAAACGGGTTGTGCAGAAGTTTGAATTGGATCCGACTAAGATGTCTTCTTT
TGATATATGCAATGACATTTGGAATATGATTAATTCCCCATAG
Protein sequenceShow/hide protein sequence
MGDFSGKMNIEDLLSYGDDLVALLKDQNDVQTLNQCLQHFNALQSSSHDDSRNVHSSVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEIEEEVREEHLLMEEIRLVS
NQINELDRQRISVQEKKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKMSSFDICNDIWNMINSP