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CmoCh07G011650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G011650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 31
Genome locationCmo_Chr07:6247514..6247846
RNA-Seq ExpressionCmoCh07G011650
SyntenyCmoCh07G011650
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588678.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2959.35Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        MG MKLCL LLL+    +PP+S+A             +  Y+FFGG +   +TED RR LFQYG+   N+  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-55100Show/hide
Query:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
        KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG
Subjt:  KLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITG

Query:  CARFTD
        CARFTD
Subjt:  CARFTD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]2.7e-57100Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT
        MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT

Query:  AITGCARFTD
        AITGCARFTD
Subjt:  AITGCARFTD

XP_022927734.1 protein RALF-like 4 [Cucurbita moschata]1.5e-2858.54Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M  +KLCL LL ++   APP S+A  +             Y+FFGG +   +TED RR LFQYG+   NK  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

XP_022927735.1 protein RALF-like 4 [Cucurbita moschata]3.1e-2958.54Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M  MKLCL LLL+    +PP+S+A             +  Y+FFGG +   +TED RR LFQYG+   N+  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1EBL1 protein RALF-like 311.3e-57100Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT
        MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCT

Query:  AITGCARFTD
        AITGCARFTD
Subjt:  AITGCARFTD

A0A6J1EI16 protein RALF-like 193.1e-2759.35Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        MG MKL + +LL+ V A  P S+A  +             Y+FFGG +   +TED RR LFQYG+   NK  R+RYLSY AL  NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

A0A6J1EIU0 protein RALF-like 47.5e-2958.54Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M  +KLCL LL ++   APP S+A  +             Y+FFGG +   +TED RR LFQYG+   NK  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYAAPD-------------YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

A0A6J1EPT5 protein RALF-like 41.5e-2958.54Show/hide
Query:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR
        M  MKLCL LLL+    +PP+S+A             +  Y+FFGG +   +TED RR LFQYG+   N+  RRR+L+Y AL+ NNIPCGRRG+SYYDC+
Subjt:  MGFMKLCLCLLLMVVAAAPPYSYA-------------APDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCR

Query:  KRRRINPYRRGCTAITGCARFTD
        KRRRINPYRRGC AITGCARFTD
Subjt:  KRRRINPYRRGCTAITGCARFTD

A0A6J1JL71 protein RALF-like 49.1e-2758.2Show/hide
Query:  MGFMKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK
        M  MK+CL LLL+    AP         Y  +  D    Y+FFGG +   +TED RR LFQYG+   N   R+R+L+Y AL+ NNIPCGRRGSSYYDC+K
Subjt:  MGFMKLCLCLLLMVVAAAP--------PYSYAAPD----YAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRK

Query:  RRRINPYRRGCTAITGCARFTD
        RRRINPYRRGC AITGCARFTD
Subjt:  RRRINPYRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 195.0e-1468Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT
        RR Y+SY AL  NN+PC RRG SYYDC+KR+R NPYRRGC+ IT C R T
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 333.4e-1058.7Show/hide
Query:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +Y+SY AL  N +PC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

Q945T0 Rapid alkalinization factor1.7e-0955.56Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGC
        ++Y+SY AL  N++PC RRG+SYY+C+   + NPY RGC+AIT C
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGC

Q9FZA0 Protein RALF-like 47.7e-1570.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF
        RRY+ Y+AL  NN+PC RRG SYYDC+KRRR NPYRRGC+AIT C R+
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 233.0e-1163.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        RRY+SY AL  N IPC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 45.5e-1670.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF
        RRY+ Y+AL  NN+PC RRG SYYDC+KRRR NPYRRGC+AIT C R+
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARF

AT2G33775.1 ralf-like 193.6e-1568Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT
        RR Y+SY AL  NN+PC RRG SYYDC+KR+R NPYRRGC+ IT C R T
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 221.5e-1050Show/hide
Query:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +++Y+SY A+  N++PC RRG+SYY+C++  + NPY RGC+ IT C R
Subjt:  RRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

AT3G16570.1 rapid alkalinization factor 232.2e-1263.83Show/hide
Query:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        RRY+SY AL  N IPC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR

AT4G15800.1 ralf-like 332.4e-1158.7Show/hide
Query:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR
        +Y+SY AL  N +PC RRG+SYY+CR+  + NPY RGC+AIT C R
Subjt:  RYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCCCCTCCATATTCCTACGCCGCCCCTGACTATGCCTTCTTCGGCGGATATGCACCAGC
ACAGTTGACAGAAGATGGTCGACGGCTACTTTTCCAATACGGATACGACAGGACAAACAAGATGTATCGTAGAAGGTATTTAAGCTATGAGGCGCTTACGTTTAACAATA
TACCGTGCGGCCGTCGTGGCAGCTCTTACTATGACTGCAGGAAGCGAAGGAGGATCAACCCTTATCGCCGTGGCTGCACTGCCATCACCGGCTGCGCTCGATTCACCGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCCCCTCCATATTCCTACGCCGCCCCTGACTATGCCTTCTTCGGCGGATATGCACCAGC
ACAGTTGACAGAAGATGGTCGACGGCTACTTTTCCAATACGGATACGACAGGACAAACAAGATGTATCGTAGAAGGTATTTAAGCTATGAGGCGCTTACGTTTAACAATA
TACCGTGCGGCCGTCGTGGCAGCTCTTACTATGACTGCAGGAAGCGAAGGAGGATCAACCCTTATCGCCGTGGCTGCACTGCCATCACCGGCTGCGCTCGATTCACCGAT
TGA
Protein sequenceShow/hide protein sequence
MGFMKLCLCLLLMVVAAAPPYSYAAPDYAFFGGYAPAQLTEDGRRLLFQYGYDRTNKMYRRRYLSYEALTFNNIPCGRRGSSYYDCRKRRRINPYRRGCTAITGCARFTD