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CmoCh07G011660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G011660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 4
Genome locationCmo_Chr07:6255214..6255507
RNA-Seq ExpressionCmoCh07G011660
SyntenyCmoCh07G011660
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595449.1 hypothetical protein SDJN03_12002, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4496.91Show/hide
Query:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKVKPYPRGCAAITGCPRISD
        MGFMKLCLCLLLMVV AAAAAPHSSAFFGG+TPAELTEDDR+LLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKVKPYPRGCAAITGCPRISD
Subjt:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKVKPYPRGCAAITGCPRISD

KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3498.73Show/hide
Query:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKV
        MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKK+
Subjt:  MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKV

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]6.4e-1042.74Show/hide
Query:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK
        MKLCLCLLL+V A AA  P               AF+G   PA +   +D RRLLFQY + +K  + K+L Y A          R  SYY+   +R+K  
Subjt:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK

Query:  PYPRGCAAITGCPRISD
        PY RGC AITGC R +D
Subjt:  PYPRGCAAITGCPRISD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]2.3e-2059.82Show/hide
Query:  MGFMKLCLCLLLMVVAAAA----AAPHSSAFFGGYTPAELTEDDRRLLFQYKYDW--KLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRG
        MGFMKLCLCLLLMVVAAA     AAP   AFFGGY PA+LTED RRLLFQY YD   K+ RR++L+Y+A          R SSYY+ R +R+++ PY RG
Subjt:  MGFMKLCLCLLLMVVAAAA----AAPHSSAFFGGYTPAELTEDDRRLLFQYKYDW--KLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRG

Query:  CAAITGCPRISD
        C AITGC R +D
Subjt:  CAAITGCPRISD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]2.2e-1041.38Show/hide
Query:  MGFMKLCLCLLLMVVAAAAAAPHSS----------AFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVKP
        MG MKLCL LLL+   +  +  +S           AF+G  TP    ED+RRLLFQY + +K  R ++L+Y+A         HR  SYY+   + +K  P
Subjt:  MGFMKLCLCLLLMVVAAAAAAPHSS----------AFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVKP

Query:  YPRGCAAITGCPRISD
        Y RGC AITGC R +D
Subjt:  YPRGCAAITGCPRISD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein5.8e-0941.88Show/hide
Query:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK
        MKL LCLLL+V A A   P               AF+G   PA +   +D RRLLFQY + +K  + K+L Y A         HR  SYY+   +R+K  
Subjt:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK

Query:  PYPRGCAAITGCPRISD
        PY RGC AITGC R +D
Subjt:  PYPRGCAAITGCPRISD

A0A0A0KHU4 Uncharacterized protein3.8e-0843.12Show/hide
Query:  KLCLCLLLMVVAAAAAA-------PHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRGCAA
        KLCL LLL+ V AA            S A    Y      ED RRLLFQY + +K  + K+L Y A         HR  SYY+ + +RKK  PY RGC A
Subjt:  KLCLCLLLMVVAAAAAA-------PHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRGCAA

Query:  ITGCPRISD
        ITGC R +D
Subjt:  ITGCPRISD

A0A1S4E1Z3 protein RALF-like 43.1e-1042.74Show/hide
Query:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK
        MKLCLCLLL+V A AA  P               AF+G   PA +   +D RRLLFQY + +K  + K+L Y A          R  SYY+   +R+K  
Subjt:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK

Query:  PYPRGCAAITGCPRISD
        PY RGC AITGC R +D
Subjt:  PYPRGCAAITGCPRISD

A0A5A7SVY5 Protein RALF-like 43.1e-1042.74Show/hide
Query:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK
        MKLCLCLLL+V A AA  P               AF+G   PA +   +D RRLLFQY + +K  + K+L Y A          R  SYY+   +R+K  
Subjt:  MKLCLCLLLMVVAAAAAAP------------HSSAFFGGYTPAEL--TEDDRRLLFQYKYDWKLSRRKHLNYKA---------HRDSSYYERRMRRKKVK

Query:  PYPRGCAAITGCPRISD
        PY RGC AITGC R +D
Subjt:  PYPRGCAAITGCPRISD

A0A6J1EBL1 protein RALF-like 311.1e-2059.82Show/hide
Query:  MGFMKLCLCLLLMVVAAAA----AAPHSSAFFGGYTPAELTEDDRRLLFQYKYDW--KLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRG
        MGFMKLCLCLLLMVVAAA     AAP   AFFGGY PA+LTED RRLLFQY YD   K+ RR++L+Y+A          R SSYY+ R +R+++ PY RG
Subjt:  MGFMKLCLCLLLMVVAAAA----AAPHSSAFFGGYTPAELTEDDRRLLFQYKYDW--KLSRRKHLNYKA---------HRDSSYYERRMRRKKVKPYPRG

Query:  CAAITGCPRISD
        C AITGC R +D
Subjt:  CAAITGCPRISD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCGGCCGCCGCCCCACATTCCTCCGCCTTCTTCGGCGGATACACACCAGCAGAGTTGAC
GGAAGATGATCGACGGCTACTTTTCCAATACAAATACGACTGGAAGTTGTCTCGTAGAAAGCATTTAAACTACAAAGCGCATCGCGACAGCTCTTACTATGAACGCAGGA
TGCGAAGGAAGAAGGTGAAGCCTTATCCCCGTGGCTGCGCTGCCATCACCGGCTGCCCTCGAATCTCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCATGAAGCTCTGCCTATGTCTCCTCCTCATGGTTGTCGCCGCCGCGGCCGCCGCCCCACATTCCTCCGCCTTCTTCGGCGGATACACACCAGCAGAGTTGAC
GGAAGATGATCGACGGCTACTTTTCCAATACAAATACGACTGGAAGTTGTCTCGTAGAAAGCATTTAAACTACAAAGCGCATCGCGACAGCTCTTACTATGAACGCAGGA
TGCGAAGGAAGAAGGTGAAGCCTTATCCCCGTGGCTGCGCTGCCATCACCGGCTGCCCTCGAATCTCCGATTGA
Protein sequenceShow/hide protein sequence
MGFMKLCLCLLLMVVAAAAAAPHSSAFFGGYTPAELTEDDRRLLFQYKYDWKLSRRKHLNYKAHRDSSYYERRMRRKKVKPYPRGCAAITGCPRISD