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CmoCh07G012250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G012250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal_S7 domain-containing protein
Genome locationCmo_Chr07:6673096..6673439
RNA-Seq ExpressionCmoCh07G012250
SyntenyCmoCh07G012250
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009536 - plastid (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068048.1 hypothetical protein E6C27_scaffold138G002460 [Cucumis melo var. makuwa]4.8e-1459.26Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL
        PGHKGHDDLTSSSP SGL+PAV SGF+ QR                       HAP VSAFPKAPLSFKRIRG+ SPG +L
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL

KAG5569022.1 hypothetical protein H5410_063982 [Solanum commersonii]1.0e-1653.33Show/hide
Query:  MQVSCSIQSELRTAYFRGITTLCPGHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPS
        MQ SCS+QSELRT +            G   L  S PF     A+CSGF+ QR           DLTQHL  RA+DSHAP VSAFPKAPLSFKRIRG+ S
Subjt:  MQVSCSIQSELRTAYFRGITTLCPGHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPS

Query:  PGKVL
        PG +L
Subjt:  PGKVL

KYP48943.1 hypothetical protein KK1_029344, partial [Cajanus cajan]6.9e-1356.79Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL
        PGHKGHDDLTSSSP SGL+PAVCSG                            HAP VSAFPKAPLSFKRIRG+ SPG +L
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL

MBA0642197.1 hypothetical protein [Gossypium klotzschianum]1.3e-1660.47Show/hide
Query:  GHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVLRFVSN
        GHKGH+DL SSSP S L+  VCSGF+ Q+            LTQHL  +A+DSHAP VSAFPKAPLSFKRIR   SP K+L F SN
Subjt:  GHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVLRFVSN

QCE10629.1 hypothetical protein DEO72_LG10g1860 [Vigna unguiculata]5.3e-1357.5Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKV
        PGHKGHDDLTSSSP SGL+PAVCSG                            HAP VSAFPKAPLSFKRIRG+ SPGK+
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKV

TrEMBL top hitse value%identityAlignment
A0A151S2A8 Uncharacterized protein (Fragment)3.3e-1356.79Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL
        PGHKGHDDLTSSSP SGL+PAVCSG                            HAP VSAFPKAPLSFKRIRG+ SPG +L
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL

A0A4D6NDK3 Uncharacterized protein2.6e-1357.5Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKV
        PGHKGHDDLTSSSP SGL+PAVCSG                            HAP VSAFPKAPLSFKRIRG+ SPGK+
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKV

A0A5A7VJP9 Uncharacterized protein2.3e-1459.26Show/hide
Query:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL
        PGHKGHDDLTSSSP SGL+PAV SGF+ QR                       HAP VSAFPKAPLSFKRIRG+ SPG +L
Subjt:  PGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVL

A0A6N2ND82 Ribosomal_S7 domain-containing protein1.0e-2260.91Show/hide
Query:  SCSIQSELRT-------AYFRGITTLCPG--HKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRI
        SC +Q  +RT       A+ RGI TLCPG  HKGHDDLTSSSP SGL+PAV     L+ L        +DLTQHL  RA+DSHAP VSAFPKAPLSFKRI
Subjt:  SCSIQSELRT-------AYFRGITTLCPG--HKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRI

Query:  RGIPSPGKVL
        RG+ SPG +L
Subjt:  RGIPSPGKVL

A0A7J8TVE4 Uncharacterized protein6.5e-1760.47Show/hide
Query:  GHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVLRFVSN
        GHKGH+DL SSSP S L+  VCSGF+ Q+            LTQHL  +A+DSHAP VSAFPKAPLSFKRIR   SP K+L F SN
Subjt:  GHKGHDDLTSSSPFSGLAPAVCSGFRLQR-LATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVLRFVSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTGAGTTGCAGCATACAATCTGAACTGAGGACGGCTTACTTTCGCGGGATCACGACCCTTTGTCCAGGCCATAAGGGGCATGATGACTTGACGTCGTCCTCGCC
TTTCTCCGGCTTAGCACCGGCAGTCTGCTCAGGGTTCCGACTTCAACGGTTGGCAACTAAACACGAGGGTTGCGCTCAGGACTTAACCCAACACCTTATGACACGAGCTA
ACGACAGTCATGCACCACTTGTGTCTGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATACCAAGCCCGGGTAAGGTTCTTCGCTTTGTATCGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGTGAGTTGCAGCATACAATCTGAACTGAGGACGGCTTACTTTCGCGGGATCACGACCCTTTGTCCAGGCCATAAGGGGCATGATGACTTGACGTCGTCCTCGCC
TTTCTCCGGCTTAGCACCGGCAGTCTGCTCAGGGTTCCGACTTCAACGGTTGGCAACTAAACACGAGGGTTGCGCTCAGGACTTAACCCAACACCTTATGACACGAGCTA
ACGACAGTCATGCACCACTTGTGTCTGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATACCAAGCCCGGGTAAGGTTCTTCGCTTTGTATCGAATTAA
Protein sequenceShow/hide protein sequence
MQVSCSIQSELRTAYFRGITTLCPGHKGHDDLTSSSPFSGLAPAVCSGFRLQRLATKHEGCAQDLTQHLMTRANDSHAPLVSAFPKAPLSFKRIRGIPSPGKVLRFVSN