; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G012610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G012610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhigh mobility group B protein 6-like
Genome locationCmo_Chr07:6893671..6897891
RNA-Seq ExpressionCmoCh07G012610
SyntenyCmoCh07G012610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595551.1 hypothetical protein SDJN03_12104, partial [Cucurbita argyrosperma subsp. sororia]9.0e-14698.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFLIFSVSFWVFFD
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS  RSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFLIFSVSFWVFFD
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFLIFSVSFWVFFD

Query:  LPAARFISGDSDFRASDLSALLLRFINSETITLLFHRTYWFLAFLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSCVPLL
        LPAARFISGDSDFRASDLS LLLRFINSETITLLFHRTYWFLAFLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSCVPLL
Subjt:  LPAARFISGDSDFRASDLSALLLRFINSETITLLFHRTYWFLAFLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSCVPLL

KAG7027530.1 hypothetical protein SDJN02_11544, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-9097.88Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS  RSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

XP_022924949.1 high mobility group B protein 6-like [Cucurbita moschata]2.8e-9198.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

XP_022966463.1 high mobility group B protein 6-like [Cucurbita maxima]1.2e-8694.71Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS MRSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

XP_023517579.1 high mobility group B protein 6-like [Cucurbita pepo subsp. pepo]1.7e-8896.83Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS MRSLREKEREKIFTDLQFQEFEISDEEESIDE SSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

TrEMBL top hitse value%identityAlignment
A0A1S3CJ78 high mobility group B protein 61.4e-6477.25Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRIS +RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEF
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF

A0A5A7SJQ2 High mobility group B protein 61.1e-6477.25Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRIS +RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEF
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF

A0A5D3CEI7 High mobility group B protein 61.4e-6477.25Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRIS +RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEF
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF

A0A6J1EAP1 high mobility group B protein 6-like1.4e-9198.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

A0A6J1HS84 high mobility group B protein 6-like6.0e-8794.71Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS MRSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein9.6e-2142.94Show/hide
Query:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL
        SGR+ LQPRN        + +  K  A  V+ P + +  KEN+           S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +L
Subjt:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL

Query:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEES-------IDENSSSDSS
        QR E Q+ LE++VDRLFRLKEL +Y  +IS +RSLR KE+++      F   E  DEE S       I+E SS+ S+
Subjt:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEES-------IDENSSSDSS

AT5G01910.2 unknown protein1.1e-1945.77Show/hide
Query:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL
        SGR+ LQPRN        + +  K  A  V+ P + +  KEN+           S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +L
Subjt:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL

Query:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREK
        QR E Q+ LE++VDRLFRLKEL +Y  +IS +RSLR KE+++
Subjt:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCTTCTCCATCCCACGCATCTAGATCTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACCGAGGAATTCGCTCTCAAATCATGTTCCTGCAGTCGCCAAAAT
CGTCAAATCCAAGGCGGAACGGGTAGAGATCCCGCTATCCGGAGATGCCAATAAGGAAAACGTACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGT
CTCTGGCGGATGAACTCAATGCGGTTAAGATGAAGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCGG
AGGAAGGAGATTTTGCAGAGAAGTGAGGTGCAGAGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGGATTTCTTCGAT
GCGAAGCCTCAGAGAGAAGGAGCGAGAGAAGATATTCACCGACTTACAATTTCAGGAGTTTGAAATCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATT
CCTCAGAATTCTTCTTAATTTTTTCCGTTTCCTTTTGGGTGTTTTTCGATCTTCCCGCCGCTCGATTTATCTCCGGTGACAGCGATTTCAGGGCGTCTGATCTCTCTGCG
CTTCTACTTCGTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATCGAACTTACTGGTTTTTGGCATTTCTTGCTTGGGGAGTCGTAGGGTGTTTGTTGTTATTTGG
ATCCACTAGAGGAAGTTGTCAATACATCCTTGAAAAGAGCTGTTTGTGCATCATTGATTCCTGTGTTCCTCTGTTATGGATTTTGTGTGTGTTTTTAATTGTTTTGACAT
TTAGTCGCTCAGGCTTGGACATTGTTGAACGGGAATTGGTTTCTAGGAAGTGCAAGAATATGGGTTTAGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTCTGTGATTCCATTTCTCTTCCTCTCCTTTTCTCCATCTCCACCAATATGCAGTCTCTTCTCCATCCCACGCATCTAGAT
CTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACCGAGGAATTCGCTCTCAAATCATGTTCCTGCAGTCGCCAAAATCGTCAAATCCAAGGCGGAACGGGTAGAGATCCC
GCTATCCGGAGATGCCAATAAGGAAAACGTACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGTCTCTGGCGGATGAACTCAATGCGGTTAAGATGA
AGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCGGAGGAAGGAGATTTTGCAGAGAAGTGAGGTGCAG
AGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGGATTTCTTCGATGCGAAGCCTCAGAGAGAAGGAGCGAGAGAAGAT
ATTCACCGACTTACAATTTCAGGAGTTTGAAATCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATTCCTCAGAATTCTTCTTAATTTTTTCCGTTTCCT
TTTGGGTGTTTTTCGATCTTCCCGCCGCTCGATTTATCTCCGGTGACAGCGATTTCAGGGCGTCTGATCTCTCTGCGCTTCTACTTCGTTTCATCAATTCCGAGACGATA
ACCCTTCTCTTTCATCGAACTTACTGGTTTTTGGCATTTCTTGCTTGGGGAGTCGTAGGGTGTTTGTTGTTATTTGGATCCACTAGAGGAAGTTGTCAATACATCCTTGA
AAAGAGCTGTTTGTGCATCATTGATTCCTGTGTTCCTCTGTTATGGATTTTGTGTGTGTTTTTAATTGTTTTGACATTTAGTCGCTCAGGCTTGGACATTGTTGAACGGG
AATTGGTTTCTAGGAAGTGCAAGAATATGGGTTTAGGAGGATGA
Protein sequenceShow/hide protein sequence
MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMR
RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISSMRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFFLIFSVSFWVFFDLPAARFISGDSDFRASDLSA
LLLRFINSETITLLFHRTYWFLAFLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSCVPLLWILCVFLIVLTFSRSGLDIVERELVSRKCKNMGLGG