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CmoCh07G012920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G012920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr07:7138527..7144239
RNA-Seq ExpressionCmoCh07G012920
SyntenyCmoCh07G012920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647791.1 hypothetical protein Csa_004224 [Cucumis sativus]2.9e-5786.13Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        G S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVI+FSSACA
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

Query:  GMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSS
        GM GGAVPALAQL +SSYHS  S S+DDKT DSRSSS
Subjt:  GMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSS

KAG7027560.1 hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-7588.37Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  G--------------------APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        G                    APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  G--------------------APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

XP_022149788.1 uncharacterized protein LOC111018136 isoform X1 [Momordica charantia]1.2e-5587.6Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVIVFSSACA
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

Query:  GMAGGAVPALAQLFSSSYHSAMSPSKDDK
        GMAGG VPALAQLFS+SYHSA+  S   K
Subjt:  GMAGGAVPALAQLFSSSYHSAMSPSKDDK

XP_022925022.1 uncharacterized protein LOC111432392 [Cucurbita moschata]1.0e-78100Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

XP_022966472.1 uncharacterized protein LOC111466117 [Cucurbita maxima]1.9e-7798.03Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

TrEMBL top hitse value%identityAlignment
A0A0A0L0B0 Uncharacterized protein9.0e-5783.57Show/hide
Query:  LGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC
        LG S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVI+FSSAC
Subjt:  LGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSAC

Query:  AGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        AGM GGAVPALAQL SSSYHS  S S+DDK  DSRSSS++
Subjt:  AGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

A0A1S4E0V5 uncharacterized protein LOC1034959684.2e-5491.74Show/hide
Query:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY
        SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGM GGAVPALAQL +SSY
Subjt:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY

Query:  HSAMSPSKDDKTHDSRSSSTM
        HS  S SKDDK+ DSRSSST+
Subjt:  HSAMSPSKDDKTHDSRSSSTM

A0A6J1D7Q1 uncharacterized protein LOC111018136 isoform X15.8e-5687.6Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA
        GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVIVFSSACA
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACA

Query:  GMAGGAVPALAQLFSSSYHSAMSPSKDDK
        GMAGG VPALAQLFS+SYHSA+  S   K
Subjt:  GMAGGAVPALAQLFSSSYHSAMSPSKDDK

A0A6J1EAN3 uncharacterized protein LOC1114323924.9e-79100Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

A0A6J1HN28 uncharacterized protein LOC1114661179.2e-7898.03Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein1.9e-1437.5Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A   G A+P  AQL  +SY+++
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA

Query:  MSPS
         S S
Subjt:  MSPS

AT2G41945.2 unknown protein1.9e-1437.5Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A   G A+P  AQL  +SY+++
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA

Query:  MSPS
         S S
Subjt:  MSPS

AT2G41945.3 unknown protein6.2e-1033.33Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALA
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+G P ++V+S   A        A++
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALA

AT3G04040.1 unknown protein7.3e-4369.42Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA
        RC HCAGPL+K++ET+ WT+ P IRDSFSMIGSAVGGTASAF GF+HVMP+V++ +KGPMWLHFL+GAPPVIV SSACAG+AGGAVPALAQL SSSYH+A
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSA

Query:  MSPSKDDKTHDS---RSSSTM
        +  S+  +  D     +SST+
Subjt:  MSPSKDDKTHDS---RSSSTM

AT5G18250.1 unknown protein3.6e-4268.85Show/hide
Query:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY--
        +RC HCAGPL++++ETS WT+ P IRDSFSMIGSAVGGTASAF GFNH MP+V++ +KGPMWLHFL+GAPPVIV SSACAG+AGG VPALAQL SSSY  
Subjt:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY--

Query:  --HSAMSP--SKDDKTHDSRSS
          HS+  P   KD+K   S +S
Subjt:  --HSAMSP--SKDDKTHDSRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGA
TGTCAACACTGTGCGGGTCCTCTCTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGT
GGTACTGCCAGTGCTTTTTATGGATTTAATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTG
ATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGGGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATCTTATCATTCAGCCATGTCTCCTTCAAAAGAT
GACAAGACTCACGATTCAAGATCATCTTCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
TTATTTCTATTTTAATTTTTTTTTAATACGCTTCTAGAAATATTGAGCGACACCTTGCGGCGGCTATATATCTCCCTCGCGACACCGCCCGCGGCAGCCAGCACC
GCTCGACGGCGACACACTCACGACGACAACTTCTGGGTTGCGACTTCGCTGCATCGGCAAGATCTGTAACTTCAAGACCTTTATGCGGTGATTGAGACCTACAGT
GACTACCTGGTGCGCTAGCTCCCCTTGTGTGATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGA
TAGCAACCTCATTAGCAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTCTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGA
TAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCCAGTGCTTTTTATGGATTTAATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTG
GTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGGGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATC
TTATCATTCAGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAATTCAATATCAACTTTTTTTTCTTCATCTTATCATT
CAGCCATGTCTTTTCAATCTTACCCTTCTAGAATATATCAATATCATATCAAAGTACGTATATTAGTGATATATCGTTCGCATATCAACAATTAAAGTATATAGA
AGACGAACACTTATCTTATAAGAGATGAAACTTCAAGTTGAAGTTCGGTATATCATTGTATTAATTTGAGGTAAAGCACAAGAGTATTGTGAGATCCCATATCGG
TTGGAGAGGGAAACGAAATATTGCTTATAAGCGTGTGGAAACCTCTCC
Protein sequenceShow/hide protein sequence
MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPV
IVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM