; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G013130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G013130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationCmo_Chr07:7359187..7363277
RNA-Seq ExpressionCmoCh07G013130
SyntenyCmoCh07G013130
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603408.1 RNA polymerase II transcriptional coactivator KIWI, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4694.06Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDH SEGDAPPKKT +KDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

KAG7027581.1 RNA polymerase II transcriptional coactivator KIWI [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4797.03Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KK+S+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]1.6e-48100Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]1.4e-4798.02Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]1.0e-4798.02Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A6J1D5M3 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.1e-4694.06Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLS+DQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like7.8e-49100Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X18.1e-4693.07Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDH  EGDAPPKKT +KDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X16.6e-4898.02Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1IRG1 RNA polymerase II transcriptional coactivator KIWI-like isoform X18.9e-4590.1Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKR+DDEDH SEGDAPPKKT +KDS+ETDEIVVCEISKNR+V+VRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAV+EN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI4.1e-3165.42Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP3.6e-1138.04Show/hide
Query:  KDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K++ED    GD    K   K+ ++  ++++C +S  RRV ++ ++GK +V IRE+Y KDGKE+P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

P11031 Activated RNA polymerase II transcriptional coactivator p159.0e-1040.54Show/hide
Query:  KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L+  + +ID AV +
Subjt:  KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Q5ZK63 Activated RNA polymerase II transcriptional coactivator p151.2e-0936.17Show/hide
Query:  RKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        +K     +S+G A  K++  +D        + +I K R V VR+++GK+++DIRE+++ ++G+  PG+KGISL+ +QWN L+  + +ID AV +
Subjt:  RKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p151.2e-0936.9Show/hide
Query:  GDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        G++       K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L+  + +ID AV +
Subjt:  GDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)2.6e-1238.04Show/hide
Query:  KDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K++ED    GD    K   K+ ++  ++++C +S  RRV ++ ++GK +V IRE+Y KDGKE+P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

AT5G09240.1 ssDNA-binding transcriptional regulator2.8e-2253.21Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLDQWNVLRNHVEE
        MS  GKRKD++  A      SE  APPKK + K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+QWN LRNH E+
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLDQWNVLRNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator9.2e-1842.34Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLD-----------
        MS  GKRKD++  A      SE  APPKK + K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+           
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLD-----------

Query:  -----------------QWNVLRNHVEEIDKAVNENS
                         QWN LRNH E+IDKA++E S
Subjt:  -----------------QWNVLRNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator2.9e-3265.42Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator3.1e-2165.43Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTLK--KDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGAGGAAAGCGAAAGGACGATGAAGACCACGCATCCGAAGGAGATGCTCCTCCGAAGAAGACATTGAAGAAAGATTCCGAAGAAACCGACGAAATCGTCGT
CTGCGAGATTTCGAAGAACCGTAGAGTTATGGTCAGGAACTGGCAAGGAAAGATTGTGGTGGATATTCGTGAGTTTTATGTCAAAGATGGAAAGGAAATGCCTGGAAAAA
AAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCTTCGAAATCACGTAGAAGAAATCGACAAAGCTGTTAATGAAAATTCGTGA
mRNA sequenceShow/hide mRNA sequence
CGCGCTCATTTGCAGTTGCAAAGTGTTGAAGAGCACAGTCGGTCGCAAAATTACAGCGAAAAAGGAGGAAGAGATGTCTGCAAGAGGAAAGCGAAAGGACGATGAAGACC
ACGCATCCGAAGGAGATGCTCCTCCGAAGAAGACATTGAAGAAAGATTCCGAAGAAACCGACGAAATCGTCGTCTGCGAGATTTCGAAGAACCGTAGAGTTATGGTCAGG
AACTGGCAAGGAAAGATTGTGGTGGATATTCGTGAGTTTTATGTCAAAGATGGAAAGGAAATGCCTGGAAAAAAAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCT
TCGAAATCACGTAGAAGAAATCGACAAAGCTGTTAATGAAAATTCGTGAGGAAATTAAATCAGGCGTCTTTTGTTGAGGACGGAAATATGACCTTTTGTACAGCTAATGG
ACTTGTTTTTGTGGGCATGAAGACCAAAGAGCAGGTATTAGCTTTTATATCTACATTAACTGCATCACTTGGATTGACATTTTGATATTGTAGACCAGAAACATGATATT
ATAACATATTATGGCATAACTGACAATATTACTTTTCTCAATTAGTAGATAATTGAGTATCAAGTTAGCATTTTCTAGATTTAGAGATCCTTAGTCCAAGGTGCTAACTA
CTTAAGAGTTAGAACTTTTCTGCCGTAAAATTAAGTACCTAATCATTACATATTTAGCTTCAGTGCCCTCAGTTCTTGAGCCCACAAGGTGTAGCTTGAGTTCTTTGCAA
CCACATCTTTAGAAACCTCCTTTCTTTCAACCAATCCTCTGGCATACCTTTCAAAGTTCTCCAGACTTCTCCAGACTGGAGCCAACTTTCTCACATCTCCTTCACATTTA
ATAATCTCAAGCATGTCTTTGGCTTCCTCCAACCTTGCCCAAAAGCATGAATCTTGAGTCAGACCTGCGTATTTCGTCCTCTGAGTATTCCCTTTGTCTGCAGCGTCGCT
CCCTCTCCACCATTTGTCGAAAATCTCGTATCTTCTGTCTCTTCCATGCTTTAAGTAATGCCCATGAGCAATGTGCTTGCCACGGCAGTAATATTCTGCTATGTCTAATG
GCTCTACTAGGAGTTTGTAGAAATGCGAAGCATTGATCCACTTCGCTCTTAAGTTGAAATCTGGAGGAAGCTCATTGTTCTCCCACATGTTGATCACTCGGTTCCAGAAC
GTCGCAAGCTTGTGTCTGTTCATGTTCACTCTAGCATGTTTTACTGAAGTATTTACTTGCTTGAAACAATCATAGTACCCCAATTGGTCACCTGCTTCATCACAAGAGGC
TTTATACCATTCTATCTCAGCCCTGTAAGGCGTAATCTTAGATAAGCTTACAGCCAGTTTCGCTGCGTTCAAGTTCGGCGTTTGTCCCATTCTCCTGGCCGTCCTCAAGC
TATTTTCAGCCATTCGAGCCACTTCATCCTGCAATTTTGAAATACTAAGTTTTCTTCTTCTCACAAACCAATAAGTTCTGTTATAAGAAAGGGAAGTTGAGAACTTTTAT
TACTTGGAAAGGTATTCCTGAGGACTGCAATGCTAGAGCCAGCCCTGCTTCATAGCTCGAATTAGGAAGACGCTCGGAGGAGAAGTTTTTCCTCTCCATGTGTTGAACTC
CAACTTTTTTCACATAATCTCCATAGTTGAGATGATCCTCAATGCTCATGTTTGGAACACTTGTTTTGAGCAACAAATAGAGCATCTTCAGAACTGATATAGCATTGTCC
AAACAAATTGCCCCATTTTCTGAGCAAAAGAAGAAGTTCCCAAATGGCCAAAACTGACTTCGTAGCGACTCCTCTTCTGAGTTAGATATCGTGTTAGAGTGAGCCAATAC
AACCCGAAAGAGCTCGTCTTTCTCTTTATCTGACAGTTGGGTAGCAAGCTTCCCAAACTGCAGAGAGGCCAGCGACAAATGCCAGTATCTAAGGAGAACATGGAGCTGGG
AAGAGAGGGAGGAGGAAAGCGGAGTAGAGAGAAGCCTCGGCATAATGTCGTGGTTTGAGACTACGTGACAGAAGTTGCCACACCATCGTTCTCTAAGAATAGCTCTCGAA
AGCGACTCGTTGCCGATCAACGGGGAGCCAAAGGTGATGCATAACAAAGGGTGGTGCGTGGTTTTGGAATGAAAGAGAGAGAGCAGCCAAAGAGTACATAGAGAGGCTGC
TGCCCCTCCAAGTGAATGGCCTGTAATCACTATTGACTTACTTTTCTCCATTACCTTTGTCATCTGCAACAGATAAGATCGCAA
Protein sequenceShow/hide protein sequence
MSARGKRKDDEDHASEGDAPPKKTLKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNENS