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CmoCh07G013370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G013370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationCmo_Chr07:7557527..7557962
RNA-Seq ExpressionCmoCh07G013370
SyntenyCmoCh07G013370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]1.7e-2083.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]1.9e-2466.99Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCEFCLEIIRDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS+FRVS SR               +   F   II DDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCEFCLEIIRDDGFSF

Query:  RFV
        RFV
Subjt:  RFV

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3897.73Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCEFCLEIIRDDGFSFRFV
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNC+FCLEIIRDDGFSFRF+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCEFCLEIIRDDGFSFRFV

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1979.41Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLE+L R +A HT R YPRFR AFSR+F S+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1979.41Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLE+L R +A HT R YPRFR AFSR+F S+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein9.1e-2566.99Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCEFCLEIIRDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS+FRVS SR               +   F   II DDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCEFCLEIIRDDGFSF

Query:  RFV
        RFV
Subjt:  RFV

A0A2C9V7E1 Uncharacterized protein4.9e-1876.92Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSLN FVET+E+LLR +A ++LR YPRFR AFSR+F+++FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 18.0e-2183.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X11.1e-1774.24Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+E++LR +  +TLR YPR R  FSR+F SIF +S+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN

B9SL52 Uncharacterized protein2.2e-1874.24Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN
        MLQ+FFAVAFSAVPLTLYVPPIRSLNLF+ET+EELLR S ++T++ YPR R AFSRLF+++FR+S+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein4.6e-1355.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS
        MLQLFF +AFSA PLTLY+PPIR L +FVET+EE+  +   ++ R++PR R A+SRL    F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCCGCAGTGCCATTGACGCTCTATGTGCCGCCAATTCGGAGCCTCAATTTGTTCGTCGAAACCCTAGAGGAACTTCTCCG
TGACTCCGCCGCTCATACGCTCAGAGTTTATCCTCGTTTTCGCCAAGCCTTCTCTCGCCTCTTCGCCTCTATTTTCCGCGTTTCTAATTCCAGATTGAACTGTGAATTTT
GTTTAGAAATCATTCGCGATGATGGATTTTCGTTTCGTTTCGTTCTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCCGCAGTGCCATTGACGCTCTATGTGCCGCCAATTCGGAGCCTCAATTTGTTCGTCGAAACCCTAGAGGAACTTCTCCG
TGACTCCGCCGCTCATACGCTCAGAGTTTATCCTCGTTTTCGCCAAGCCTTCTCTCGCCTCTTCGCCTCTATTTTCCGCGTTTCTAATTCCAGATTGAACTGTGAATTTT
GTTTAGAAATCATTCGCGATGATGGATTTTCGTTTCGTTTCGTTCTTCTCTGA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCEFCLEIIRDDGFSFRFVLL