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CmoCh07G014090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G014090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncleft lip and palate transmembrane protein 1 homolog
Genome locationCmo_Chr07:8084483..8087012
RNA-Seq ExpressionCmoCh07G014090
SyntenyCmoCh07G014090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008429 - Cleft lip and palate transmembrane 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595710.1 Cleft lip and palate transmembrane protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3697.5Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEP+TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

KAG7027671.1 Cleft lip and palate transmembrane protein 1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-3794.05Show/hide
Query:  SLYYPDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        S +  DLNVEP+TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  SLYYPDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

XP_022925288.1 cleft lip and palate transmembrane protein 1 homolog isoform X1 [Cucurbita moschata]6.6e-3798.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

XP_022925289.1 cleft lip and palate transmembrane protein 1 homolog isoform X2 [Cucurbita moschata]6.6e-3798.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

XP_023518298.1 cleft lip and palate transmembrane protein 1 homolog isoform X1 [Cucurbita pepo subsp. pepo]1.5e-3697.5Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEP+TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

TrEMBL top hitse value%identityAlignment
A0A6J1EBQ8 cleft lip and palate transmembrane protein 1 homolog isoform X23.2e-3798.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

A0A6J1EES0 cleft lip and palate transmembrane protein 1 homolog isoform X13.2e-3798.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

A0A6J1EYU8 cleft lip and palate transmembrane protein 1 homolog3.3e-3492.5Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEP+TGNYYPTIFFN+FWLLRDKLV+IN TV ELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

A0A6J1HRD1 cleft lip and palate transmembrane protein 1 homolog1.1e-3493.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEP+TGNYYPTIFFNDFWLLRDKLVQIN TVDELVLNLEVAPISM KWQLFLQIDQSFQIH SYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

A0A6J1HVC1 cleft lip and palate transmembrane protein 1 homolog3.3e-3492.5Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P LNVEP+TGNYYPTIFFN+FWLLRDKLV+IN TV ELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

SwissProt top hitse value%identityAlignment
O96005 Cleft lip and palate transmembrane protein 13.1e-0540.43Show/hide
Query:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF
        +G+YYP I+FND+W L+     IN ++  L L +   P+S+ +WQL+
Subjt:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF

Q2NL17 Cleft lip and palate transmembrane protein 1 homolog3.1e-0540.43Show/hide
Query:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF
        +G+YYP I+FND+W L+     IN ++  L L +   P+S+ +WQL+
Subjt:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF

Q54RJ1 CLPTM1-like membrane protein cnrB1.6e-0635.48Show/hide
Query:  STGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYG
        + G Y P I+ N+FWL R+ L  +N TV +L + +  + + + KWQL +Q+ +S  +  S+G
Subjt:  STGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYG

Q6DEL2 Cleft lip and palate transmembrane protein 1 homolog1.1e-0542.55Show/hide
Query:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF
        +G+YYP ++FND+W L+     IN T+  L L L   P+S+ +WQL+
Subjt:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF

Q8VBZ3 Cleft lip and palate transmembrane protein 1 homolog3.1e-0540.43Show/hide
Query:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF
        +G+YYP I+FND+W L+     IN ++  L L +   P+S+ +WQL+
Subjt:  TGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLF

Arabidopsis top hitse value%identityAlignment
AT5G08500.1 Transmembrane CLPTM1 family protein5.6e-3482.72Show/hide
Query:  YPDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        YP L VEPST NYYPT+FFN+FWLLRDKL+ IN TV EL LNLEV+PISMTKWQLF QIDQSFQIHRSYGSML+GE+DELK
Subjt:  YPDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK

AT5G23575.1 Transmembrane CLPTM1 family protein2.6e-3173.75Show/hide
Query:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK
        P L VEP+TGNYYPTI+FN+FWLLRDK + +N TV EL LNLE++PISM KWQLF Q+DQSFQ+ RSYGSML+GE+DELK
Subjt:  PDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADELK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTGCATTCTCGGTCTCACTTCTTTTCCTCTTCCCAAAAGCTCTGAGCACAACAAATATTATACTCTGTCTTTCTTCTCTTTATTATCCTGACTTGAATGTTGA
GCCCAGTACAGGAAACTACTATCCAACCATTTTCTTCAATGACTTTTGGCTACTTAGAGATAAGTTGGTTCAAATTAACGGGACAGTGGACGAGCTGGTACTTAATCTGG
AAGTTGCTCCCATAAGCATGACCAAGTGGCAGTTATTTCTCCAGATCGATCAGTCATTCCAGATTCACCGTAGCTATGGAAGCATGCTTGAAGGTGAGGCAGATGAGTTG
AAGCTACGAGGAGTTGAATGCGAGAATGCTGGAGGATTTCGTAGAATTCGACGTCGCGGTCGCCTTGGAGGACGTGACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTGCATTCTCGGTCTCACTTCTTTTCCTCTTCCCAAAAGCTCTGAGCACAACAAATATTATACTCTGTCTTTCTTCTCTTTATTATCCTGACTTGAATGTTGA
GCCCAGTACAGGAAACTACTATCCAACCATTTTCTTCAATGACTTTTGGCTACTTAGAGATAAGTTGGTTCAAATTAACGGGACAGTGGACGAGCTGGTACTTAATCTGG
AAGTTGCTCCCATAAGCATGACCAAGTGGCAGTTATTTCTCCAGATCGATCAGTCATTCCAGATTCACCGTAGCTATGGAAGCATGCTTGAAGGTGAGGCAGATGAGTTG
AAGCTACGAGGAGTTGAATGCGAGAATGCTGGAGGATTTCGTAGAATTCGACGTCGCGGTCGCCTTGGAGGACGTGACCATTGA
Protein sequenceShow/hide protein sequence
MVVAFSVSLLFLFPKALSTTNIILCLSSLYYPDLNVEPSTGNYYPTIFFNDFWLLRDKLVQINGTVDELVLNLEVAPISMTKWQLFLQIDQSFQIHRSYGSMLEGEADEL
KLRGVECENAGGFRRIRRRGRLGGRDH