; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh07G014230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G014230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransposable element protein
Genome locationCmo_Chr07:8184453..8187270
RNA-Seq ExpressionCmoCh07G014230
SyntenyCmoCh07G014230
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8725588.1 hypothetical protein F3Y22_tig00008386pilonHSYRG00069 [Hibiscus syriacus]2.8e-6930.11Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTR------
        M PN+E F D  + N G +YMGND+ CK +GIGS+++K  DG  R L DVRYVP LKKNLISLG L++ G  + +  G LKV  G LV + G R      
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTR------

Query:  ------------------------------------------RGL---------------------------------SKALWAEALSYAVHLVNRLPVS
                                                  +GL                                  KA WAEA++YA HL+NRLP S
Subjt:  ------------------------------------------RGL---------------------------------SKALWAEALSYAVHLVNRLPVS

Query:  ENGERTPLEV-------------------------------------------------------------DNNFD--VLEQK-----------------
          G +TPLEV                                                             D  FD   L +K                 
Subjt:  ENGERTPLEV-------------------------------------------------------------DNNFD--VLEQK-----------------

Query:  -----------------EHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTW
                         E S +E+    E +E PE++A  RPRR IR+PARF D +AYA  ++ D +P ++++AIQS  S  W+ AM++E+ SL+ N TW
Subjt:  -----------------EHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTW

Query:  DLVQLPKGKKEIGCKWVFAKRKTS----NIRYKARLVAKGYAQKE-------------------------------------------------------
         L QLPKGK+ IGCKWVF K+  S    ++RYKA+LVAKGYAQK+                                                       
Subjt:  DLVQLPKGKKEIGCKWVFAKRKTS----NIRYKARLVAKGYAQKE-------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRS
                          V +VSRYMH+P + HWQAVKWILRY+  T+DVG+ F++ E   L   +  YVDSDYA DLDKRRSTT YLFT+A  PV W+S
Subjt:  ------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRS

Query:  TLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        TLQS VALSTTEA+YM V+EA KEAIW++GL+ D
Subjt:  TLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

KAG8497200.1 hypothetical protein CXB51_008576 [Gossypium anomalum]1.2e-6427.95Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----
        MCPN++ F   K+  GGVV MGNDS C  MG+G+VQ+K  DG I+ L DVRYVP LKKNLI LG L++ G  I L  G LKV    L  + GTRR     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV--------------------
                                                      GL K  WA+A++YA HL+NRLP +    +TP+E+                    
Subjt:  ----------------------------------------------GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV--------------------

Query:  -----------------------------------------DNNFDVL----------EQKEHSLEEQSIVNERVEEPESVA------------KNRPRR
                                                 D  FD L          + K  S  +Q  + +  ++P ++               RPRR
Subjt:  -----------------------------------------DNNFDVL----------EQKEHSLEEQSIVNERVEEPESVA------------KNRPRR

Query:  VIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK----TSNIRYKARLVAKGYAQK
         IRKPARFDD +AYA  +  D VP+++ +AI +P+ + W++AMN+E+ SL  N+TW+LV LPKGKK IGCKWV+AK++     + IRYKARLVAKGYAQK
Subjt:  VIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK----TSNIRYKARLVAKGYAQK

Query:  E---------------------------------------------------------------------------------------------------
        E                                                                                                   
Subjt:  E---------------------------------------------------------------------------------------------------

Query:  ---------------------VSMVSR---------------------------------------------YMHNPSKEHWQAVKWILRYILGTIDVGI
                             VS+  +                                             YMHNP K HWQAVKWILRYI  T+DVG+
Subjt:  ---------------------VSMVSR---------------------------------------------YMHNPSKEHWQAVKWILRYILGTIDVGI

Query:  KFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI
         F++     L   V  YVDSDY  DLDKRRSTT Y+FT+AGGP+ W+STLQSTVALST EAEYM VTEA KEAIW+ G++
Subjt:  KFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI

PSS08126.1 Endonuclease [Actinidia chinensis var. chinensis]3.5e-7528.09Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----
        MCP+R+ F  F++ +GGVV MGND+ CK MGIG++++KMF G ++ L DVRYVPDLKKNLISLG  D+ GY+IILEGG LKV RGALV + GTRR     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------GLSKALWAEALSYAVHLVNRLP
                                                                                      GLSKA WAEA++YA HL NRLP
Subjt:  ------------------------------------------------------------------------------GLSKALWAEALSYAVHLVNRLP

Query:  VSENGERTPLEVD--------------------------------NNFDVL---------EQKEH----SLEEQSIVNERV-------------------
         +    +TP+E D                                N+ DV           +KE+    S ++  +V+  V                   
Subjt:  VSENGERTPLEVD--------------------------------NNFDVL---------EQKEH----SLEEQSIVNERV-------------------

Query:  -----------EEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKR
                   +  ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++KDA+Q   +  W+ AM++E+ SL  NQTW+LVQLPKGKK IGCKW++ K+
Subjt:  -----------EEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKR

Query:  K-TSNIRYKARLVAKGYAQKE-------------------------------------------------------------------------------
        + T  +R+KARLVAKGYAQKE                                                                               
Subjt:  K-TSNIRYKARLVAKGYAQKE-------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVG
                                                                           VSMVSRYMHNP K HWQAVKWILRYI GT++VG
Subjt:  -------------------------------------------------------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVG

Query:  IKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        +KFQ+ +          YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRSTLQSTVALSTTEAEYM VTEAFKEAIW+HGLIND
Subjt:  IKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

PSS29970.1 Endonuclease [Actinidia chinensis var. chinensis]1.8e-7137.85Show/hide
Query:  GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER-----
        GLSKA WAEA++YA HL NRLP +    +TP+EV      +++D L           KE  L                        E + IVN R     
Subjt:  GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER-----

Query:  -----------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDA
                                           V+ P                      ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++KDA
Subjt:  -----------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDA

Query:  IQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE--------------------------------
        +Q   +  W+ AM++E+ SL  NQTW+LV+LPKGKK IGCKW++ K++ T  IR+KARLVAKGYAQKE                                
Subjt:  IQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE--------------------------------

Query:  --------------------------------------------------------------------------------------VSMVSRYMHNPSKE
                                                                                              VSMVSRYMH+P KE
Subjt:  --------------------------------------------------------------------------------------VSMVSRYMHNPSKE

Query:  HWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI
        HW AVKWILRYI GTIDVG+K+Q+++   + +    YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRSTLQSTVALSTTEAEYM VTEAFKEAIW+HGLI
Subjt:  HWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI

Query:  ND
        ND
Subjt:  ND

PSS35035.1 Endonuclease [Actinidia chinensis var. chinensis]7.5e-7027.01Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----
        MCP+R+ F  F++ +GGVV MGND+ CK MGIG++++KMF G ++ L DVRYVPDLKKNLISLG  D+ GY+IILEGG LKV RGALV + GTRR     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER--
           GLSKA WAEA++YA HL NRLP +    +TP+EV       ++D L           KE  L                        E + IVN R  
Subjt:  ---GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER--

Query:  --------------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSF
                                              V+ P                      ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++
Subjt:  --------------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSF

Query:  KDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE-----------------------------
        KDA+Q   +  W+ AM++E+ SL  NQTW+LV+LPKGKK IGCKW++ K++ T  IR+KARLVAKGYAQKE                             
Subjt:  KDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE-----------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRST
                         VSMVSRYMHNP K HWQAVKWILRYI GT++VG+KFQ+ +          YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRST
Subjt:  -----------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRST

Query:  LQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        LQSTVALSTTEAEYM VTEAFKEAIW+HGLIND
Subjt:  LQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

TrEMBL top hitse value%identityAlignment
A0A2R6QHR4 Endonuclease1.7e-7528.09Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----
        MCP+R+ F  F++ +GGVV MGND+ CK MGIG++++KMF G ++ L DVRYVPDLKKNLISLG  D+ GY+IILEGG LKV RGALV + GTRR     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------GLSKALWAEALSYAVHLVNRLP
                                                                                      GLSKA WAEA++YA HL NRLP
Subjt:  ------------------------------------------------------------------------------GLSKALWAEALSYAVHLVNRLP

Query:  VSENGERTPLEVD--------------------------------NNFDVL---------EQKEH----SLEEQSIVNERV-------------------
         +    +TP+E D                                N+ DV           +KE+    S ++  +V+  V                   
Subjt:  VSENGERTPLEVD--------------------------------NNFDVL---------EQKEH----SLEEQSIVNERV-------------------

Query:  -----------EEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKR
                   +  ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++KDA+Q   +  W+ AM++E+ SL  NQTW+LVQLPKGKK IGCKW++ K+
Subjt:  -----------EEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKR

Query:  K-TSNIRYKARLVAKGYAQKE-------------------------------------------------------------------------------
        + T  +R+KARLVAKGYAQKE                                                                               
Subjt:  K-TSNIRYKARLVAKGYAQKE-------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVG
                                                                           VSMVSRYMHNP K HWQAVKWILRYI GT++VG
Subjt:  -------------------------------------------------------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVG

Query:  IKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        +KFQ+ +          YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRSTLQSTVALSTTEAEYM VTEAFKEAIW+HGLIND
Subjt:  IKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

A0A2R6RIX9 Endonuclease8.6e-7237.85Show/hide
Query:  GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER-----
        GLSKA WAEA++YA HL NRLP +    +TP+EV      +++D L           KE  L                        E + IVN R     
Subjt:  GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER-----

Query:  -----------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDA
                                           V+ P                      ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++KDA
Subjt:  -----------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDA

Query:  IQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE--------------------------------
        +Q   +  W+ AM++E+ SL  NQTW+LV+LPKGKK IGCKW++ K++ T  IR+KARLVAKGYAQKE                                
Subjt:  IQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE--------------------------------

Query:  --------------------------------------------------------------------------------------VSMVSRYMHNPSKE
                                                                                              VSMVSRYMH+P KE
Subjt:  --------------------------------------------------------------------------------------VSMVSRYMHNPSKE

Query:  HWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI
        HW AVKWILRYI GTIDVG+K+Q+++   + +    YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRSTLQSTVALSTTEAEYM VTEAFKEAIW+HGLI
Subjt:  HWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLI

Query:  ND
        ND
Subjt:  ND

A0A2R6RYD4 Endonuclease3.6e-7027.01Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----
        MCP+R+ F  F++ +GGVV MGND+ CK MGIG++++KMF G ++ L DVRYVPDLKKNLISLG  D+ GY+IILEGG LKV RGALV + GTRR     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRR-----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER--
           GLSKA WAEA++YA HL NRLP +    +TP+EV       ++D L           KE  L                        E + IVN R  
Subjt:  ---GLSKALWAEALSYAVHLVNRLPVSENGERTPLEV-----DNNFDVL---------EQKEHSL------------------------EEQSIVNER--

Query:  --------------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSF
                                              V+ P                      ES+A +RP+RVIR+PAR+ DT+AYA  +I+GVP ++
Subjt:  --------------------------------------VEEP----------------------ESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSF

Query:  KDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE-----------------------------
        KDA+Q   +  W+ AM++E+ SL  NQTW+LV+LPKGKK IGCKW++ K++ T  IR+KARLVAKGYAQKE                             
Subjt:  KDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRK-TSNIRYKARLVAKGYAQKE-----------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRST
                         VSMVSRYMHNP K HWQAVKWILRYI GT++VG+KFQ+ +          YVDSDYA DLDKRRSTT Y+FTMAGGPVCWRST
Subjt:  -----------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRST

Query:  LQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        LQSTVALSTTEAEYM VTEAFKEAIW+HGLIND
Subjt:  LQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

A0A6A2ZN97 Cellulose synthase-like protein D21.5e-6328.67Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRG----
        M PNRE F D  + N  VVY+GND+ CK +GIGS+++K  DG  R L DVRYVP LKKNLISLG L++ G  + +  G LKV  GALV + G R+     
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRG----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------LSKALWAEALSYAVHLVNRLPVSENGERTPLEVDNNF-----------------------------------------------------
                    KA WAEA++Y  HL+NRLP S  G +TPLE  N F                                                     
Subjt:  ----------LSKALWAEALSYAVHLVNRLPVSENGERTPLEVDNNF-----------------------------------------------------

Query:  -------------------DVLEQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIA
                           D L   E S +E+    E +E PE +A  RPRR IR+PARF D +AY   ++ D +P ++++ IQS ++  W+  M++E+ 
Subjt:  -------------------DVLEQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIA

Query:  SLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN----IRYKARLVAKGYAQKE-----------------------------------------------
        SL+ N TW L QLPKGK+ IGCKWVF  +  S+    +RYKARLV KGYAQKE                                               
Subjt:  SLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN----IRYKARLVAKGYAQKE-----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQST
                     V +VS YMH+P + HWQ VKWILRY+  T+DVG+ F++ E   L   V  Y D DYA DLDK RST  YLFT+A  PV W+STLQST
Subjt:  -------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQST

Query:  VALSTTEAEYMTVTEAFKEAIWMHGLIND
        VALSTTEA YM+V+EA KEAIW++ L+ D
Subjt:  VALSTTEAEYMTVTEAFKEAIWMHGLIND

A0A6A3CDS8 CCHC-type domain-containing protein1.4e-6930.11Show/hide
Query:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTR------
        M PN+E F D  + N G +YMGND+ CK +GIGS+++K  DG  R L DVRYVP LKKNLISLG L++ G  + +  G LKV  G LV + G R      
Subjt:  MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTR------

Query:  ------------------------------------------RGL---------------------------------SKALWAEALSYAVHLVNRLPVS
                                                  +GL                                  KA WAEA++YA HL+NRLP S
Subjt:  ------------------------------------------RGL---------------------------------SKALWAEALSYAVHLVNRLPVS

Query:  ENGERTPLEV-------------------------------------------------------------DNNFD--VLEQK-----------------
          G +TPLEV                                                             D  FD   L +K                 
Subjt:  ENGERTPLEV-------------------------------------------------------------DNNFD--VLEQK-----------------

Query:  -----------------EHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTW
                         E S +E+    E +E PE++A  RPRR IR+PARF D +AYA  ++ D +P ++++AIQS  S  W+ AM++E+ SL+ N TW
Subjt:  -----------------EHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTW

Query:  DLVQLPKGKKEIGCKWVFAKRKTS----NIRYKARLVAKGYAQKE-------------------------------------------------------
         L QLPKGK+ IGCKWVF K+  S    ++RYKA+LVAKGYAQK+                                                       
Subjt:  DLVQLPKGKKEIGCKWVFAKRKTS----NIRYKARLVAKGYAQKE-------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRS
                          V +VSRYMH+P + HWQAVKWILRY+  T+DVG+ F++ E   L   +  YVDSDYA DLDKRRSTT YLFT+A  PV W+S
Subjt:  ------------------VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRS

Query:  TLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND
        TLQS VALSTTEA+YM V+EA KEAIW++GL+ D
Subjt:  TLQSTVALSTTEAEYMTVTEAFKEAIWMHGLIND

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.8e-1944.35Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAG-GPVCWRSTLQSTVALSTTEAEYMT
        V+++SRY    + E WQ +K +LRY+ GTID+ + F+K   F  +N++  YVDSD+A     R+STT YLF M     +CW +  Q++VA S+TEAEYM 
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAG-GPVCWRSTLQSTVALSTTEAEYMT

Query:  VTEAFKEAIWMHGLI
        + EA +EA+W+  L+
Subjt:  VTEAFKEAIWMHGLI

P04146 Copia protein6.9e-1031.62Show/hide
Query:  EQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPA--------RFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPK
        E  EH L+E  I N    +   +   R  R+  KP           +  +  A ++ + VPNSF +     +   W+EA+N E+ + +IN TW + + P+
Subjt:  EQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPA--------RFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPK

Query:  GKKEIGCKWVFAKRKT---SNIRYKARLVAKGYAQK
         K  +  +WVF+ +     + IRYKARLVA+G+ QK
Subjt:  GKKEIGCKWVFAKRKT---SNIRYKARLVAKGYAQK

P0CV72 Secreted RxLR effector protein 1619.6e-2044.55Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV
        V ++S++  +P   HWQA+K +LRY+  T   G++F +     L      Y D+D+A D++ RRST+ YLF + GG V WRS  Q TVALS+TE EYM +
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV

Query:  TEAFKEAIWM
        +EA +EA+W+
Subjt:  TEAFKEAIWM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-2549.14Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV
        V +VSR++ NP KEHW+AVKWILRY+ GT    + F        D  +  Y D+D A D+D R+S+T YLFT +GG + W+S LQ  VALSTTEAEY+  
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV

Query:  TEAFKEAIWMHGLIND
        TE  KE IW+   + +
Subjt:  TEAFKEAIWMHGLIND

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.7e-1336.49Show/hide
Query:  VSENGERTPLEVDNNFDVLEQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEI
        VSE GE+ P EV    +  EQ +  +EE     +  E+ + + ++   RV  +  R+  T  Y     D  P S K+ +  P      +AM +E+ SL+ 
Subjt:  VSENGERTPLEVDNNFDVLEQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEI

Query:  NQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE
        N T+ LV+LPKGK+ + CKWVF  +K  +   +RYKARLV KG+ QK+
Subjt:  NQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-1041.49Show/hide
Query:  PNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRG
        P R++F  +   + G V MGN S  K+ GIG + IK   G    LKDVR+VPDL+ NLIS   LD  GY         ++ +G+LV   G  RG
Subjt:  PNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.6e-1437.93Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV
        V+ +S++MH P++EH QA+K ILRY+ GT + GI  +K    +L     +Y D+D+A D D   ST  Y+  +   P+ W S  Q  V  S+TEAEY +V
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV

Query:  TEAFKEAIWMHGLIND
             E  W+  L+ +
Subjt:  TEAFKEAIWMHGLIND

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.9e-1537.93Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV
        V+ +S+YMH P+ +HW A+K +LRY+ GT D GI  +K    +L     +Y D+D+A D D   ST  Y+  +   P+ W S  Q  V  S+TEAEY +V
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV

Query:  TEAFKEAIWMHGLIND
             E  W+  L+ +
Subjt:  TEAFKEAIWMHGLIND

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-1133.09Show/hide
Query:  PNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE----VSMVSRYMHNPSKEHWQAV
        P+++ +A      L W  AM+ EI ++E   TW++  LP  KK IGCKWV+  +  S+    RYKARLVAKGY Q+E    +   S      S +   A+
Subjt:  PNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE----VSMVSRYMHNPSKEHWQAV

Query:  KWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYAS
          I  + L  +D+   F   +   LD  +   +   YA+
Subjt:  KWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYAS

ATMG00810.1 DNA/RNA polymerases superfamily protein5.4e-1033.03Show/hide
Query:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV
        V++V + MH P+   +  +K +LRY+ GTI  G+   K    N    V ++ DSD+A     RRSTT +   +    + W +  Q TV+ S+TE EY  +
Subjt:  VSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTVYLFTMAGGPVCWRSTLQSTVALSTTEAEYMTV

Query:  TEAFKEAIW
             E  W
Subjt:  TEAFKEAIW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.3e-0837.21Show/hide
Query:  YAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE
        Y+ ++   +    K  I +     W +AM +E+ +L  N+TW LV  P  +  +GCKWVF  +  S+    R KARLVAKG+ Q+E
Subjt:  YAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKRKTSN---IRYKARLVAKGYAQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCCCAACAGAGAGATGTTTTTGGACTTCAAAAAGTTCAATGGTGGAGTTGTTTATATGGGCAATGATAGTACTTGCAAGATGATGGGAATCGGCTCAGTACAAAT
CAAGATGTTTGATGGGGTTATACGAAAACTCAAAGATGTGAGGTATGTCCCTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCA
TTTTGGAAGGAGGGAATTTGAAAGTAGCTCGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGATTGAGTAAGGCACTTTGGGCTGAGGCTCTCAGTTATGCAGTT
CACTTGGTGAATCGCTTACCTGTTTCTGAAAATGGTGAGAGAACTCCGCTTGAGGTAGATAATAACTTTGATGTCTTAGAACAGAAAGAGCACAGCCTTGAGGAGCAAAG
CATTGTAAATGAAAGAGTGGAGGAACCTGAGTCTGTCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTT
TGATTGATGGAGTTCCTAACAGTTTCAAAGATGCTATTCAGAGCCCGAATAGCTTACACTGGCAAGAGGCTATGAATCAGGAGATAGCATCATTGGAGATAAATCAAACA
TGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAGGAAGACTTCTAATATACGTTATAAGGCTCGACTTGTGGCTAAAGG
CTACGCACAAAAAGAAGTAAGCATGGTGAGTCGTTATATGCATAATCCTAGTAAAGAGCATTGGCAGGCTGTCAAATGGATTCTTAGGTACATTCTTGGCACTATTGATG
TTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTAGTTATGTGGATTCTGATTATGCTAGTGATTTGGATAAGCGACGATCTACTACGGTT
TATTTATTTACTATGGCTGGTGGACCTGTTTGTTGGCGTTCAACATTGCAATCTACTGTTGCATTGTCTACCACTGAAGCAGAGTATATGACAGTAACGGAAGCTTTTAA
AGAAGCTATTTGGATGCATGGTTTGATCAATGACGGGGTATTTTGCAAGAACATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTCCCAACAGAGAGATGTTTTTGGACTTCAAAAAGTTCAATGGTGGAGTTGTTTATATGGGCAATGATAGTACTTGCAAGATGATGGGAATCGGCTCAGTACAAAT
CAAGATGTTTGATGGGGTTATACGAAAACTCAAAGATGTGAGGTATGTCCCTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCA
TTTTGGAAGGAGGGAATTTGAAAGTAGCTCGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGATTGAGTAAGGCACTTTGGGCTGAGGCTCTCAGTTATGCAGTT
CACTTGGTGAATCGCTTACCTGTTTCTGAAAATGGTGAGAGAACTCCGCTTGAGGTAGATAATAACTTTGATGTCTTAGAACAGAAAGAGCACAGCCTTGAGGAGCAAAG
CATTGTAAATGAAAGAGTGGAGGAACCTGAGTCTGTCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTT
TGATTGATGGAGTTCCTAACAGTTTCAAAGATGCTATTCAGAGCCCGAATAGCTTACACTGGCAAGAGGCTATGAATCAGGAGATAGCATCATTGGAGATAAATCAAACA
TGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAGGAAGACTTCTAATATACGTTATAAGGCTCGACTTGTGGCTAAAGG
CTACGCACAAAAAGAAGTAAGCATGGTGAGTCGTTATATGCATAATCCTAGTAAAGAGCATTGGCAGGCTGTCAAATGGATTCTTAGGTACATTCTTGGCACTATTGATG
TTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTAGTTATGTGGATTCTGATTATGCTAGTGATTTGGATAAGCGACGATCTACTACGGTT
TATTTATTTACTATGGCTGGTGGACCTGTTTGTTGGCGTTCAACATTGCAATCTACTGTTGCATTGTCTACCACTGAAGCAGAGTATATGACAGTAACGGAAGCTTTTAA
AGAAGCTATTTGGATGCATGGTTTGATCAATGACGGGGTATTTTGCAAGAACATATAG
Protein sequenceShow/hide protein sequence
MCPNREMFLDFKKFNGGVVYMGNDSTCKMMGIGSVQIKMFDGVIRKLKDVRYVPDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGLSKALWAEALSYAV
HLVNRLPVSENGERTPLEVDNNFDVLEQKEHSLEEQSIVNERVEEPESVAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSFKDAIQSPNSLHWQEAMNQEIASLEINQT
WDLVQLPKGKKEIGCKWVFAKRKTSNIRYKARLVAKGYAQKEVSMVSRYMHNPSKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVASYVDSDYASDLDKRRSTTV
YLFTMAGGPVCWRSTLQSTVALSTTEAEYMTVTEAFKEAIWMHGLINDGVFCKNI