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CmoCh07G014240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh07G014240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationCmo_Chr07:8192214..8198215
RNA-Seq ExpressionCmoCh07G014240
SyntenyCmoCh07G014240
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009108226.1 ribosomal protein S11 [Orobanche latisquama]2.0e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V IKG GLGRDAVLRAI RSDILL+F+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
YP_009382994.1 ribosomal protein S11 [Albizia odoratissima]3.5e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG+GLGRDA LRAI RS ILLSFIRD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
YP_009767454.1 ribosomal protein S11 [Hedysarum semenovii]9.1e-0582.35Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A V IKG+GLGRDA LRAIHRSDILL FIRD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
YP_009859831.1 ribosomal protein S11 [Silene kiusiana]2.0e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V IKG GLGRDA LRAIHRS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
YP_009890944.1 ribosomal protein S11 [Aphragmus involucratus]3.5e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+VKIKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
TrEMBL top hitse value%identityAlignment
A0A097ZRH1 Ribosomal protein S119.8e-0579.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V IKG GLGRDAVLRAI RSDILL+F+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A0A1Z1CL84 30S ribosomal protein S11, chloroplastic1.7e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG+GLGRDA LRAI RS ILLSFIRD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A0A6H0E837 Ribosomal protein S114.4e-0582.35Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A V IKG+GLGRDA LRAIHRSDILL FIRD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A0A6J3XT75 30S ribosomal protein S11, chloroplastic9.8e-0579.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V IKG GLGRDA LRAIHRS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A0A6M8YPM2 30S ribosomal protein S11, chloroplastic1.7e-0479.41Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+VKIKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
SwissProt top hitse value%identityAlignment
A4QK51 30S ribosomal protein S11, chloroplastic1.0e-0676.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A4QKD8 30S ribosomal protein S11, chloroplastic1.0e-0676.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A4QKM5 30S ribosomal protein S11, chloroplastic1.0e-0676.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
A4QKW4 30S ribosomal protein S11, chloroplastic1.0e-0676.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
P56802 30S ribosomal protein S11, chloroplastic1.0e-0676.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S117.2e-0876.47Show/hide
Query:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD
        MQ+A+V+IKG GLGRDA LRAI RS ILLSF+RD
Subjt:  MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAAGCACAAGTCAAGATAAAGGGCTCTGGTCTTGGAAGAGATGCAGTGTTAAGAGCTATTCATAGAAGCGATATACTCTTAAGTTTCATACGGGATCAGTCTGA
CAAAGGACCTTGCCTCTCGATGTTGCAGTTGAAGAAGAGGAAGAGGAGGAAGTGGAGAGGGAGGGAGAAAGTGGGAGTGGAAGTGTTGGGCAATGGAAGAGGGTGCTTCT
CCTTGACTGGAGAAGACGACGATGTTGAGTGCATGTGGATAAGAGAGGCGCGAAGGAAAGCTCAGCCGCCATTGTGGTTCTTAGTTGTTTCGGAGGCTTCGCCGTGGGCT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAAGCACAAGTCAAGATAAAGGGCTCTGGTCTTGGAAGAGATGCAGTGTTAAGAGCTATTCATAGAAGCGATATACTCTTAAGTTTCATACGGGATCAGTCTGA
CAAAGGACCTTGCCTCTCGATGTTGCAGTTGAAGAAGAGGAAGAGGAGGAAGTGGAGAGGGAGGGAGAAAGTGGGAGTGGAAGTGTTGGGCAATGGAAGAGGGTGCTTCT
CCTTGACTGGAGAAGACGACGATGTTGAGTGCATGTGGATAAGAGAGGCGCGAAGGAAAGCTCAGCCGCCATTGTGGTTCTTAGTTGTTTCGGAGGCTTCGCCGTGGGCT
TAG
Protein sequenceShow/hide protein sequence
MQQAQVKIKGSGLGRDAVLRAIHRSDILLSFIRDQSDKGPCLSMLQLKKRKRRKWRGREKVGVEVLGNGRGCFSLTGEDDDVECMWIREARRKAQPPLWFLVVSEASPWA