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CmoCh08G000200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G000200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein LAX PANICLE 2-like isoform X2
Genome locationCmo_Chr08:103150..104039
RNA-Seq ExpressionCmoCh08G000200
SyntenyCmoCh08G000200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022960083.1 protein LAX PANICLE 2-like isoform X1 [Cucurbita moschata]5.3e-3279.57Show/hide
Query:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG
        MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL      RR  +G+   +  L  +QG
Subjt:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG

XP_022960084.1 protein LAX PANICLE 2-like isoform X2 [Cucurbita moschata]5.3e-3279.57Show/hide
Query:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG
        MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL      RR  +G+   +  L  +QG
Subjt:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG

XP_023005112.1 protein LAX PANICLE 2-like isoform X1 [Cucurbita maxima]1.4e-2464.22Show/hide
Query:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE
        MTHFQSSS       HNSLHDPSAPP KAWLRLSIAPTHLH PQP         LKINESLPHLSTPFQLHPALH PTSNS VL      RR  +G+   
Subjt:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE

Query:  IHQLLESQG
        +  L  +QG
Subjt:  IHQLLESQG

XP_023005113.1 protein LAX PANICLE 2-like isoform X2 [Cucurbita maxima]1.4e-2464.22Show/hide
Query:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE
        MTHFQSSS       HNSLHDPSAPP KAWLRLSIAPTHLH PQP         LKINESLPHLSTPFQLHPALH PTSNS VL      RR  +G+   
Subjt:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE

Query:  IHQLLESQG
        +  L  +QG
Subjt:  IHQLLESQG

XP_023514333.1 protein LAX PANICLE 2-like [Cucurbita pepo subsp. pepo]3.3e-2668.75Show/hide
Query:  MTHF---QSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG
        MTHF    + +HNSLHDPSAPP KAWLRLSIAPTHLH PQPLKINESLPHL TPFQLHPALHSPTSNSD+L      RR  +G+   +  L  +QG
Subjt:  MTHF---QSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG

TrEMBL top hitse value%identityAlignment
A0A6J1H7U0 protein LAX PANICLE 2-like isoform X12.6e-3279.57Show/hide
Query:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG
        MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL      RR  +G+   +  L  +QG
Subjt:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG

A0A6J1H9W6 protein LAX PANICLE 2-like isoform X22.6e-3279.57Show/hide
Query:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG
        MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL      RR  +G+   +  L  +QG
Subjt:  MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASEIHQLLESQG

A0A6J1KSA4 protein LAX PANICLE 2-like isoform X16.7e-2564.22Show/hide
Query:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE
        MTHFQSSS       HNSLHDPSAPP KAWLRLSIAPTHLH PQP         LKINESLPHLSTPFQLHPALH PTSNS VL      RR  +G+   
Subjt:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE

Query:  IHQLLESQG
        +  L  +QG
Subjt:  IHQLLESQG

A0A6J1L1B5 protein LAX PANICLE 2-like isoform X26.7e-2564.22Show/hide
Query:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE
        MTHFQSSS       HNSLHDPSAPP KAWLRLSIAPTHLH PQP         LKINESLPHLSTPFQLHPALH PTSNS VL      RR  +G+   
Subjt:  MTHFQSSS-------HNSLHDPSAPPHKAWLRLSIAPTHLHRPQP---------LKINESLPHLSTPFQLHPALHSPTSNSDVL------RRETAGVASE

Query:  IHQLLESQG
        +  L  +QG
Subjt:  IHQLLESQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCATTTCCAGTCTTCTTCCCATAACTCTCTTCATGACCCCTCCGCCCCCCCTCATAAGGCTTGGCTCCGCCTTAGCATCGCCCCCACTCATCTCCACCGCCCTCA
ACCACTCAAAATAAATGAATCTCTGCCTCACCTCTCCACCCCATTTCAACTCCACCCTGCACTTCACTCTCCTACCTCCAACTCCGACGTCCTCAGGAGGGAAACAGCCG
GCGTTGCCTCAGAGATCCACCAGCTACTTGAGAGTCAAGGATGGAAGGATGAGGGTTGGATTAGTAATGAAGTATTTGGTGAAAAAGCTGAGACTGGAAAGCGAAACAGA
GGTTTAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCATTTCCAGTCTTCTTCCCATAACTCTCTTCATGACCCCTCCGCCCCCCCTCATAAGGCTTGGCTCCGCCTTAGCATCGCCCCCACTCATCTCCACCGCCCTCA
ACCACTCAAAATAAATGAATCTCTGCCTCACCTCTCCACCCCATTTCAACTCCACCCTGCACTTCACTCTCCTACCTCCAACTCCGACGTCCTCAGGAGGGAAACAGCCG
GCGTTGCCTCAGAGATCCACCAGCTACTTGAGAGTCAAGGATGGAAGGATGAGGGTTGGATTAGTAATGAAGTATTTGGTGAAAAAGCTGAGACTGGAAAGCGAAACAGA
GGTTTAACCTAA
Protein sequenceShow/hide protein sequence
MTHFQSSSHNSLHDPSAPPHKAWLRLSIAPTHLHRPQPLKINESLPHLSTPFQLHPALHSPTSNSDVLRRETAGVASEIHQLLESQGWKDEGWISNEVFGEKAETGKRNR
GLT