; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G000280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G000280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S27
Genome locationCmo_Chr08:150598..154567
RNA-Seq ExpressionCmoCh08G000280
SyntenyCmoCh08G000280
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000592 - Ribosomal protein S27
IPR011332 - Zinc-binding ribosomal protein
IPR019275 - Protein of unknown function DUF2301
IPR023407 - Ribosomal protein S27, zinc-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592828.1 40S ribosomal protein S27-2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-20397.1Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNL SLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LP+NSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN-----VLQNDI
        CYGKLEAGILTFVIPTLLLGHLSGLMD+GAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQEL  +     VLQNDI
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN-----VLQNDI

Query:  DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
Subjt:  DLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

KAG7025235.1 hypothetical protein SDJN02_11730 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-15398.62Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MAC CLCASILSPSNL SLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LP+NSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAGILTFVIPTLLLGHLSGLMD+GAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

XP_022959722.1 uncharacterized protein LOC111460706 [Cucurbita moschata]2.3e-156100Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

XP_023004744.1 uncharacterized protein LOC111497955 [Cucurbita maxima]7.3e-15598.97Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

XP_023515274.1 uncharacterized protein LOC111779356 [Cucurbita pepo subsp. pepo]3.1e-15397.93Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAA QSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSL QYVV+NPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

TrEMBL top hitse value%identityAlignment
A0A0A0KC45 Uncharacterized protein8.2e-13687.54Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILS   L SL+YSA  KTKLL  SPV+FP PSKLSA KCKAAGQ+SP+ TVY+GIYGPWTVD SDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPD+SSL DTLKQNLDLLY LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y+NL+QPAG+SLVQYVVDNPSAVWF+GPL+AALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN
        CYGKLEAGILTFVIPTLLLGHL+GLMDDG KL LLGSWMALFVIFAGRKF+QPIKDDIGDKSVF+FN LGEDEKKALIAKLEQQE+ QN
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN

A0A5D3DMA3 DUF2301 domain-containing protein1.1e-13587.89Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILS   L SL+YSA  KTKLL  SPV+FPSPSKLSALKCKAAGQ+SP+ TVY+GIYGPWTVD SDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSL DTLKQNLDLLY LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y NLAQPAG+SLVQYVVDNPSAVWF+GPL+AALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN
        CYGKLEAGILTF+IPTLLLGHL+GLMDDG KL LLGSWMALFVIFAGRKF+QPIKDDIGDKSVF+FN LGE+EKKALIAKLEQQ + QN
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN

A0A6J1H5C2 uncharacterized protein LOC1114607061.1e-156100Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

A0A6J1KX72 uncharacterized protein LOC1114979553.5e-15598.97Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILSPSNLLSL+YSA IKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
        CYGKLEAG+LTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNV

E5GB55 Uncharacterized protein3.1e-13587.2Show/hide
Query:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF
        MACGCLCASILS   L SL+YSA  KT+LL  SPV+FPSPSKLSALKCKAAGQ+SP+ TVY+GIYGPWTVD SDVREVILYR GLVTAATSFVIASSVAF
Subjt:  MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAF

Query:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL
        LPDNSSL DTLKQNLDLLY LGGGGLGLSL LIHIYVTAIKRTLQA WVLGVAGSLV Y+NLAQPAG+SLVQYVVDNPSAVWF+GPL+AALTGLVFKEGL
Subjt:  LPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGL

Query:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN
        CYGKLEAGILTF+IPTLLLGHL+GLMDDG KL LLGSWMALFVIFAGRKF+QPIKDDIGDKSVF+FN LGE+EKKALIAKLEQQ + QN
Subjt:  CYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQN

SwissProt top hitse value%identityAlignment
O64650 40S ribosomal protein S27-18.1e-4091.57Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK
        VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK

P47903 40S ribosomal protein S274.2e-3685.88Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        VL +DIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG   RLTEGCSFRRK D
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

Q8L953 40S ribosomal protein S27-31.1e-3992.77Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK
        VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK

Q96564 40S ribosomal protein S274.8e-4092.94Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        VLQNDIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC  CQ+VLCQPTGG+ARLTEGCSFRRKGD
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

Q9M2F1 40S ribosomal protein S27-21.0e-4295.29Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

Arabidopsis top hitse value%identityAlignment
AT1G28140.1 unknown protein5.7e-9772.15Show/hide
Query:  AGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVL
        + Q +   TVY+G+YGPWT+D +DV+EVILYR+GLVTAA SFV ASS AFLP +S LS+T+KQN DL Y +G  GLGLSL LIHIYVT IKRTLQA W L
Subjt:  AGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDTLKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVL

Query:  GVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKF
        G  GS   Y  LA+PAGD+LV YVVD+PSAVWF+GPLFA+LTGLVFKEGLCYGKLEAG+LTF+IP++LLGHLSGLM+D  KL LLG+WMALF++FAGRKF
Subjt:  GVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLGHLSGLMDDGAKLGLLGSWMALFVIFAGRKF

Query:  TQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELG
        TQPIKDDIGDKSVF F  L +DEKKA++ KLEQ++LG
Subjt:  TQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELG

AT2G45710.1 Zinc-binding ribosomal protein family protein5.8e-4191.57Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK
        VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK

AT3G61110.1 ribosomal protein S277.3e-4495.29Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

AT3G61111.1 Zinc-binding ribosomal protein family protein1.2e-3581.18Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD
        VLQNDIDLLNPPAELEKRKHKLKRLV SPNS+FM V+C  C NITT+FSHSQTVVVCG CQ+VLCQPTGG+A+LT GCSFR+  D
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD

AT5G47930.1 Zinc-binding ribosomal protein family protein7.5e-4192.77Show/hide
Query:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK
        VLQNDIDLL+PP ELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K
Subjt:  VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGTGGATGTTTATGTGCCTCCATTCTTTCTCCCTCCAACCTTCTTTCTCTTGATTATTCAGCTGATATTAAAACCAAGTTGCTGCTTCCTTCCCCAGTTGCTTT
CCCTTCACCATCTAAGTTATCAGCTCTCAAGTGCAAGGCTGCTGGCCAATCCTCGCCTACTTCCACTGTCTATCGGGGAATTTATGGTCCTTGGACCGTTGATCCTTCCG
ACGTTAGAGAGGTAATTTTATATAGAGCGGGCTTAGTGACAGCTGCTACCTCTTTTGTGATAGCTTCATCAGTTGCTTTTTTACCCGATAACTCTTCATTGAGTGACACA
CTTAAGCAAAATCTTGATCTGTTATATGCCTTGGGCGGAGGAGGATTAGGCTTATCCCTAGTTTTGATTCACATATATGTAACAGCAATTAAGCGCACTCTTCAAGCTTT
TTGGGTGCTTGGTGTTGCTGGATCTTTGGTAGCTTACGTAAATCTTGCACAACCAGCTGGGGACAGCTTAGTGCAGTATGTGGTCGATAACCCATCGGCTGTCTGGTTTA
TTGGTCCTCTCTTTGCAGCACTGACTGGACTTGTCTTCAAAGAAGGTCTTTGCTATGGGAAGCTTGAGGCTGGAATTCTTACCTTTGTCATACCAACGCTACTACTAGGC
CACCTGAGTGGTTTGATGGACGATGGGGCCAAACTTGGTCTGTTAGGTTCATGGATGGCCCTGTTTGTGATATTTGCCGGAAGAAAGTTCACTCAGCCCATCAAGGATGA
TATTGGCGACAAATCTGTTTTCATGTTCAATGATCTTGGAGAGGACGAAAAGAAGGCGTTGATTGCAAAGCTTGAGCAGCAAGAGCTTGGTCAGAATGTTCTTCAAAACG
ATATTGATTTGCTCAATCCTCCGGCCGAACTTGAGAAGAGAAAACATAAGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGATGTGAAGTGCCAGGGTTGC
TTTAACATAACCACTGTATTCAGTCATTCACAGACAGTCGTGGTATGTGGGAATTGCCAGTCGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGCTG
CTCCTTCAGAAGAAAGGGTGACTAA
mRNA sequenceShow/hide mRNA sequence
ACATTTCCTGGTGCGACGGAAACGGAGACGAGCGCCAGATTTTGTGGCGGAGAGAGTCCGAAATGGCGTGTGGATGTTTATGTGCCTCCATTCTTTCTCCCTCCAACCTT
CTTTCTCTTGATTATTCAGCTGATATTAAAACCAAGTTGCTGCTTCCTTCCCCAGTTGCTTTCCCTTCACCATCTAAGTTATCAGCTCTCAAGTGCAAGGCTGCTGGCCA
ATCCTCGCCTACTTCCACTGTCTATCGGGGAATTTATGGTCCTTGGACCGTTGATCCTTCCGACGTTAGAGAGGTAATTTTATATAGAGCGGGCTTAGTGACAGCTGCTA
CCTCTTTTGTGATAGCTTCATCAGTTGCTTTTTTACCCGATAACTCTTCATTGAGTGACACACTTAAGCAAAATCTTGATCTGTTATATGCCTTGGGCGGAGGAGGATTA
GGCTTATCCCTAGTTTTGATTCACATATATGTAACAGCAATTAAGCGCACTCTTCAAGCTTTTTGGGTGCTTGGTGTTGCTGGATCTTTGGTAGCTTACGTAAATCTTGC
ACAACCAGCTGGGGACAGCTTAGTGCAGTATGTGGTCGATAACCCATCGGCTGTCTGGTTTATTGGTCCTCTCTTTGCAGCACTGACTGGACTTGTCTTCAAAGAAGGTC
TTTGCTATGGGAAGCTTGAGGCTGGAATTCTTACCTTTGTCATACCAACGCTACTACTAGGCCACCTGAGTGGTTTGATGGACGATGGGGCCAAACTTGGTCTGTTAGGT
TCATGGATGGCCCTGTTTGTGATATTTGCCGGAAGAAAGTTCACTCAGCCCATCAAGGATGATATTGGCGACAAATCTGTTTTCATGTTCAATGATCTTGGAGAGGACGA
AAAGAAGGCGTTGATTGCAAAGCTTGAGCAGCAAGAGCTTGGTCAGAATGTTCTTCAAAACGATATTGATTTGCTCAATCCTCCGGCCGAACTTGAGAAGAGAAAACATA
AGCTCAAGCGTCTCGTACAGTCGCCCAACTCATTCTTCATGGATGTGAAGTGCCAGGGTTGCTTTAACATAACCACTGTATTCAGTCATTCACAGACAGTCGTGGTATGT
GGGAATTGCCAGTCGGTCTTGTGCCAGCCAACTGGAGGGCGCGCTAGGCTAACAGAAGGCTGCTCCTTCAGAAGAAAGGGTGACTAA
Protein sequenceShow/hide protein sequence
MACGCLCASILSPSNLLSLDYSADIKTKLLLPSPVAFPSPSKLSALKCKAAGQSSPTSTVYRGIYGPWTVDPSDVREVILYRAGLVTAATSFVIASSVAFLPDNSSLSDT
LKQNLDLLYALGGGGLGLSLVLIHIYVTAIKRTLQAFWVLGVAGSLVAYVNLAQPAGDSLVQYVVDNPSAVWFIGPLFAALTGLVFKEGLCYGKLEAGILTFVIPTLLLG
HLSGLMDDGAKLGLLGSWMALFVIFAGRKFTQPIKDDIGDKSVFMFNDLGEDEKKALIAKLEQQELGQNVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGC
FNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD