; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G000310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G000310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationCmo_Chr08:159010..160578
RNA-Seq ExpressionCmoCh08G000310
SyntenyCmoCh08G000310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592830.1 UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5881.41Show/hide
Query:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEE----GKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDD
        KDLLDEFLHILD+YKASLL PPIDRTKWCEE    GK KEK KEEEK ELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDD
Subjt:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEE----GKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDD

Query:  NTESTFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        NTESTFLNVMAFEKLHVEGAAQEAPSLITSFV  M          +L+ DE ++ +
Subjt:  NTESTFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

KAG7025238.1 UPF0481 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5680.92Show/hide
Query:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
        K LLDEFLHILD+YKASLLCPPIDRTKWCEEG  K K KE+EK ELSGAEFQVIPPATKLHE GIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
Subjt:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES

Query:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        TFLNVMAFEKLHVEGAAQEAPSLITSFV  M          +L+ DE ++ +
Subjt:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

XP_022960231.1 UPF0481 protein At3g47200-like [Cucurbita moschata]1.3e-5478.95Show/hide
Query:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
        KDLLDEFLHILDLYKASLLCPPIDRTKWC            EKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
Subjt:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES

Query:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        TFLNVMAFEKLHVEGAAQEAPSLITSFV  M          +L+ DE ++ +
Subjt:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

XP_023004238.1 UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima]2.1e-2549.67Show/hide
Query:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        +++ + LHIL++YK SLL PPIDR  W  E             + S  E QVIPPATKLHEAGIKFK S+T+SL+DV FD   GVL LP LMVDD+TEST
Subjt:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
         LNVMAFEKLH++   +     +TSFV  M          +L+ DE ++ +
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

XP_023513985.1 UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]1.7e-4366.89Show/hide
Query:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        DL +EFLHILD+YKASLL PP+DRT WC            EK +LSGAE QVIPPATKL EAGI+FK S+TKSLKDVIFD+ +GVLSLPMLMVDD+TEST
Subjt:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        FLNVMAFEKLHVEGAAQEAPSL+TSFV  M          +L+ DE ++ +
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

TrEMBL top hitse value%identityAlignment
A0A6J1D5C0 UPF0481 protein At3g47200-like9.1e-2248.3Show/hide
Query:  EFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNV
        E+LHIL++Y  +LL P     K   +G+ K + KE  K EL  +E Q+I PAT+LHEAGI+F+ SQ+KS+ DV FDE  GVL LP ++VDD+TESTFLNV
Subjt:  EFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNV

Query:  MAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        MAFEKLH     +EA S +T F+  M     V   ++L+   N++++
Subjt:  MAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

A0A6J1H6V9 UPF0481 protein At3g47200-like6.2e-5578.95Show/hide
Query:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
        KDLLDEFLHILDLYKASLLCPPIDRTKWC            EKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES
Subjt:  KDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTES

Query:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
        TFLNVMAFEKLHVEGAAQEAPSLITSFV  M          +L+ DE ++ +
Subjt:  TFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

A0A6J1HB25 UPF0481 protein At3g47200-like1.1e-2450.99Show/hide
Query:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        +++ + LHIL++YK SLL PPIDRT W             E G  S  E QVIPPATKL EAGIKFK S+T SL DV FD   GVL LP LMVDDNTEST
Subjt:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
         LNVMAFEKLH++   +     +TSFV  M          +L+ DE ++ +
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

A0A6J1KVQ6 UPF0481 protein At3g47200-like isoform X21.0e-2549.67Show/hide
Query:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        +++ + LHIL++YK SLL PPIDR  W  E             + S  E QVIPPATKLHEAGIKFK S+T+SL+DV FD   GVL LP LMVDD+TEST
Subjt:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
         LNVMAFEKLH++   +     +TSFV  M          +L+ DE ++ +
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

A0A6J1KYV8 UPF0481 protein At3g47200-like isoform X11.0e-2549.67Show/hide
Query:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        +++ + LHIL++YK SLL PPIDR  W  E             + S  E QVIPPATKLHEAGIKFK S+T+SL+DV FD   GVL LP LMVDD+TEST
Subjt:  DLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI
         LNVMAFEKLH++   +     +TSFV  M          +L+ DE ++ +
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVI

SwissProt top hitse value%identityAlignment
P0C897 Putative UPF0481 protein At3g026451.1e-0528.43Show/hide
Query:  IPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVIK
        IP  + LH+AG++FK +   ++  V FD   G   LP++ +D NTE+   N++A+E  +  G     P + T + + +         + L+R++  LV +
Subjt:  IPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVIK

Query:  VK
        +K
Subjt:  VK

Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)7.9e-1032.06Show/hide
Query:  LHILDLYKASLLC------PPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
        LH LD+++ SLL       P + R +W    +  +K ++           Q+I   T+L EAGIKF+  +T    D+ F    G L +P L++ D T+S 
Subjt:  LHILDLYKASLLC------PPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST

Query:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAME
        FLN++AFE+ H++ +       ITS++  M+
Subjt:  FLNVMAFEKLHVEGAAQEAPSLITSFVQAME

AT3G50130.1 Plant protein of unknown function (DUF247)3.0e-0931.2Show/hide
Query:  LHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMA
        LH LD+++ +LL P  +        +W  + +  +K      + Q+I   T+L EAGIKF+  +T    D+ F    G L +P L++ D T+S F N++A
Subjt:  LHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMA

Query:  FEKLHVEGAAQEAPSLITSFVQAME
        FE+ H++ +       ITS++  M+
Subjt:  FEKLHVEGAAQEAPSLITSFVQAME

AT3G50140.1 Plant protein of unknown function (DUF247)7.9e-1030.83Show/hide
Query:  LKDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTE
        + D   E LH LD+++ SLL P +         +W  K    +K      + Q++   T+L EAGIKFK  ++    D+ F    G L +P L++ D T+
Subjt:  LKDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTE

Query:  STFLNVMAFEKLHVEGAAQEAPSLITSFVQAME
        S F N++A+E+ H++         ITS++  M+
Subjt:  STFLNVMAFEKLHVEGAAQEAPSLITSFVQAME

AT3G50180.1 Plant protein of unknown function (DUF247)4.6e-1033.33Show/hide
Query:  LHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMA
        LH LD++  SLL P             K  +       L     +VIP  T+L +AG KFK+++T    D+ F    G L +P L++ D T+S FLN++A
Subjt:  LHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLNVMA

Query:  FEKLHVEGAAQEAPSLITSFVQAMERQPSVPISIS
        FE+ H+E +       ITS++  M+     P  IS
Subjt:  FEKLHVEGAAQEAPSLITSFVQAMERQPSVPISIS

AT3G50190.1 Plant protein of unknown function (DUF247)1.5e-0831.25Show/hide
Query:  EFLHILDLYKASLLCPPI-DRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLN
        E LH LD+++ S+L P +    +      WK    ++ + +L       +   T+L EAGIKFK  ++  L D+ F    G L +P L++ D T+S   N
Subjt:  EFLHILDLYKASLLCPPI-DRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTESTFLN

Query:  VMAFEKLHVEGAAQEAPSLITSFVQAME
        ++AFE+ H++   Q     ITS++  +E
Subjt:  VMAFEKLHVEGAAQEAPSLITSFVQAME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACAGGAGCTGATTTGCAATTGAAAGATCTGCTCGATGAATTCTTGCACATTTTGGACTTGTATAAGGCCTCATTATTGTGTCCTCCGATAGACCGGACGAAGTG
GTGTGAGGAGGGGAAGTGGAAGGAGAAGTGGAAGGAGGAGGAGAAGGGGGAGCTTTCAGGCGCGGAGTTTCAAGTCATTCCGCCCGCAACAAAGCTTCATGAAGCGGGGA
TCAAATTCAAGATGAGCCAGACGAAGAGCCTTAAGGACGTGATTTTCGATGAAGTAGAAGGCGTGTTGAGTCTGCCGATGTTGATGGTGGACGACAACACTGAGTCCACT
TTCTTAAACGTGATGGCATTTGAGAAACTCCACGTTGAGGGTGCAGCCCAAGAAGCGCCTTCCCTCATCACGTCTTTCGTGCAAGCAATGGAGAGACAGCCATCGGTGCC
CATCAGCATCAGCCTCGTTAGAGATGAGAATGAGTTGGTTATTAAGGTGAAGGACAGTCTGCATCAACTAGTGTTGAATTCTCCTGCCTTGGTCGACATGGAATCAGGGC
GAAGCGGAAAACGATACCATTCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACACAGGAGCTGATTTGCAATTGAAAGATCTGCTCGATGAATTCTTGCACATTTTGGACTTGTATAAGGCCTCATTATTGTGTCCTCCGATAGACCGGACGAAGTG
GTGTGAGGAGGGGAAGTGGAAGGAGAAGTGGAAGGAGGAGGAGAAGGGGGAGCTTTCAGGCGCGGAGTTTCAAGTCATTCCGCCCGCAACAAAGCTTCATGAAGCGGGGA
TCAAATTCAAGATGAGCCAGACGAAGAGCCTTAAGGACGTGATTTTCGATGAAGTAGAAGGCGTGTTGAGTCTGCCGATGTTGATGGTGGACGACAACACTGAGTCCACT
TTCTTAAACGTGATGGCATTTGAGAAACTCCACGTTGAGGGTGCAGCCCAAGAAGCGCCTTCCCTCATCACGTCTTTCGTGCAAGCAATGGAGAGACAGCCATCGGTGCC
CATCAGCATCAGCCTCGTTAGAGATGAGAATGAGTTGGTTATTAAGGTGAAGGACAGTCTGCATCAACTAGTGTTGAATTCTCCTGCCTTGGTCGACATGGAATCAGGGC
GAAGCGGAAAACGATACCATTCTTCATGA
Protein sequenceShow/hide protein sequence
MHTGADLQLKDLLDEFLHILDLYKASLLCPPIDRTKWCEEGKWKEKWKEEEKGELSGAEFQVIPPATKLHEAGIKFKMSQTKSLKDVIFDEVEGVLSLPMLMVDDNTEST
FLNVMAFEKLHVEGAAQEAPSLITSFVQAMERQPSVPISISLVRDENELVIKVKDSLHQLVLNSPALVDMESGRSGKRYHSS