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CmoCh08G000700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G000700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein TDIF
Genome locationCmo_Chr08:386931..387182
RNA-Seq ExpressionCmoCh08G000700
SyntenyCmoCh08G000700
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646241.1 hypothetical protein Csa_015939 [Cucumis sativus]2.1e-1468.54Show/hide
Query:  MASATQKQSSSPH---FLSLFFSFLLLLTLTSS-PSMAADRHRLLSTASTATAVQPFESRLQ-NSPAT-IGELGAEAHEVPSGPNPISN
        MA+A+QKQSSS     FLSLFFSFLLLLTL SS PSMA+DRH  L +AS +TA  P +SR +  SPAT +G+ GAEAHEVPSGPNPISN
Subjt:  MASATQKQSSSPH---FLSLFFSFLLLLTLTSS-PSMAADRHRLLSTASTATAVQPFESRLQ-NSPAT-IGELGAEAHEVPSGPNPISN

KAG7025274.1 putative serine/threonine-protein kinase PBL26, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-1397.73Show/hide
Query:  MAADRHRLLSTASTATAVQPFESRLQNSPATIGELGAEAHEVPS
        MAADRHRLLSTASTATAVQPFESRL+NSPATIGELGAEAHEVPS
Subjt:  MAADRHRLLSTASTATAVQPFESRLQNSPATIGELGAEAHEVPS

XP_003532298.1 CLAVATA3/ESR (CLE)-related protein TDIF [Glycine max]9.9e-0443.02Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN
        K  S  HFLSLFF  LLL+ L+  P   +MA+      S+ S    T++ P  ++  ++P++      E GA+AHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN

XP_007140575.1 hypothetical protein PHAVU_008G124100g [Phaseolus vulgaris]9.9e-0444.71Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAA-DRHRLLSTASTATAVQPFESRLQNSP----ATIGELGAEAHEVPSGPNPISN
        K  S  HFL+LFF  LLL+ L+  P   +MA+ +  +   +  + TA+ P  S    +P    A   E GAEAHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAA-DRHRLLSTASTATAVQPFESRLQNSP----ATIGELGAEAHEVPSGPNPISN

XP_017417475.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Vigna angularis]1.5e-0447.13Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATIG-----ELGAEAHEVPSGPNPISN
        K  S  HFL+LFF  LLL+ L+  P   +MA+      S+ ST   TA+ P  S+   SP++       E GAEAHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATIG-----ELGAEAHEVPSGPNPISN

TrEMBL top hitse value%identityAlignment
A0A0B2PD39 CLAVATA3/ESR (CLE)-related protein TDIF4.8e-0443.02Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN
        K  S  HFLSLFF  LLL+ L+  P   +MA+      S+ S    T++ P  ++  ++P++      E GA+AHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN

A0A0S3RV03 Uncharacterized protein7.4e-0547.13Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATIG-----ELGAEAHEVPSGPNPISN
        K  S  HFL+LFF  LLL+ L+  P   +MA+      S+ ST   TA+ P  S+   SP++       E GAEAHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATIG-----ELGAEAHEVPSGPNPISN

A0A371EL24 CLAVATA3/ESR (CLE)-related protein TDIF (Fragment)6.3e-0442.68Show/hide
Query:  SSSP---HFLSLFFSFLLLLTLTSSP----SMAADRHRLLSTASTATAVQPFESRLQNSPATIGELGAEAHEVPSGPNPISN
        S SP    FL+LFF  LLL+ L+  P      ++D  +   +A + T + P  S   +S     E+GA+AHEVPSGPNPISN
Subjt:  SSSP---HFLSLFFSFLLLLTLTSSP----SMAADRHRLLSTASTATAVQPFESRLQNSPATIGELGAEAHEVPSGPNPISN

E9L572 CLE26 protein4.8e-0443.02Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN
        K  S  HFLSLFF  LLL+ L+  P   +MA+      S+ S    T++ P  ++  ++P++      E GA+AHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAADRHRLLSTAST--ATAVQPFESRLQNSPATI----GELGAEAHEVPSGPNPISN

V7B413 Uncharacterized protein4.8e-0444.71Show/hide
Query:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAA-DRHRLLSTASTATAVQPFESRLQNSP----ATIGELGAEAHEVPSGPNPISN
        K  S  HFL+LFF  LLL+ L+  P   +MA+ +  +   +  + TA+ P  S    +P    A   E GAEAHEVPSGPNPISN
Subjt:  KQSSSPHFLSLFFSFLLLLTLTSSP---SMAA-DRHRLLSTASTATAVQPFESRLQNSP----ATIGELGAEAHEVPSGPNPISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24770.1 CLAVATA3/ESR-RELATED 416.2e-0439.13Show/hide
Query:  TQKQSSSPHFLSLFFSFLLLLTLTS---------SPSMAADRHRLL----STASTATAVQPFESRLQNSPATIGELGAEAHEVPSGPNPISN
        T  +SS    L L F FL LL  +S         S SM A   R+L      AS+   ++P  S  ++  +   E G +AHEVPSGPNPISN
Subjt:  TQKQSSSPHFLSLFFSFLLLLTLTS---------SPSMAADRHRLL----STASTATAVQPFESRLQNSPATIGELGAEAHEVPSGPNPISN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTACACAAAAACAATCTTCATCACCTCACTTTCTCTCTCTCTTCTTCTCCTTCCTCCTCCTTCTAACCCTCACTTCCTCCCCTTCCATGGCGGCCGACCG
CCACCGTCTTCTCTCCACCGCCTCCACTGCCACCGCCGTCCAACCATTTGAATCTCGACTCCAAAACTCCCCAGCCACGATCGGAGAGCTCGGAGCCGAAGCCCATGAAG
TTCCAAGTGGTCCAAACCCTATATCCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTGCTACACAAAAACAATCTTCATCACCTCACTTTCTCTCTCTCTTCTTCTCCTTCCTCCTCCTTCTAACCCTCACTTCCTCCCCTTCCATGGCGGCCGACCG
CCACCGTCTTCTCTCCACCGCCTCCACTGCCACCGCCGTCCAACCATTTGAATCTCGACTCCAAAACTCCCCAGCCACGATCGGAGAGCTCGGAGCCGAAGCCCATGAAG
TTCCAAGTGGTCCAAACCCTATATCCAACTAA
Protein sequenceShow/hide protein sequence
MASATQKQSSSPHFLSLFFSFLLLLTLTSSPSMAADRHRLLSTASTATAVQPFESRLQNSPATIGELGAEAHEVPSGPNPISN