; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G000820 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G000820
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S15a-5-like
Genome locationCmo_Chr08:425468..428281
RNA-Seq ExpressionCmoCh08G000820
SyntenyCmoCh08G000820
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000630 - Ribosomal protein S8
IPR035987 - Ribosomal protein S8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592876.1 40S ribosomal protein S15a-5, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6295.35Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

KAG7025281.1 40S ribosomal protein S15a-5 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-6294.57Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKAL+YRQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

XP_022959550.1 40S ribosomal protein S15a-2-like [Cucurbita moschata]6.0e-6396.12Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

XP_023005097.1 40S ribosomal protein S15a-5-like [Cucurbita maxima]3.3e-6192.25Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPIS+VMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKE+EAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGI+DHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

XP_023514843.1 40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo]5.1e-6294.57Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

TrEMBL top hitse value%identityAlignment
A0A0A0KDZ7 Uncharacterized protein6.9e-5784.5Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR+IVNAERRG + VELKPIS+VM++FLKVMKDHGYI D+QVH+PQRVGRITVELQGRIKDCKA+TYRQDIKAK+IEAY +RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEA+KRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

A0A1S3BDC0 40S ribosomal protein S15a-2-like1.4e-5786.05Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGK+ VELKPIS+VM++FLKVMKDHGYI D+QVH+PQRVGRITV+LQGRIKDCKALTYRQDIKAK+IEAYR+RTLPT QWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEA+KRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

A0A5D3D2U5 40S ribosomal protein S15a-2-like1.4e-5786.05Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGK+ VELKPIS+VM++FLKVMKDHGYI D+QVH+PQRVGRITV+LQGRIKDCKALTYRQDIKAK+IEAYR+RTLPT QWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEA+KRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

A0A6J1H6L4 40S ribosomal protein S15a-2-like2.9e-6396.12Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

A0A6J1KS88 40S ribosomal protein S15a-5-like1.6e-6192.25Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPIS+VMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKE+EAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        VVITTPEGI+DHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

SwissProt top hitse value%identityAlignment
O82205 40S ribosomal protein S15a-22.8e-5578.29Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAE+RGKA+VELKP+S+VMS+FLK+MK+ GYI +FQVHDP RVGRITV+LQGR+ DCKALTYRQD+KA EI  Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        +VITTP+GILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

P42798 40S ribosomal protein S15a-11.4e-3050.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM

Q00332 40S ribosomal protein S15a1.4e-3050.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM

Q9AT34 40S ribosomal protein S15a1.1e-3050.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM

Q9M0E0 40S ribosomal protein S15a-51.3e-5582.26Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAERRGKA+VELKPIS+VMS+FL++MK+ GYI +FQV+DP RVGRITV+LQGR+ DCKALTYRQD++AKEIE Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQM
        VVITTP+GILDHEEAIKRNVGGQ+
Subjt:  VVITTPEGILDHEEAIKRNVGGQM

Arabidopsis top hitse value%identityAlignment
AT1G07770.1 ribosomal protein S15A9.9e-3250.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM

AT1G07770.2 ribosomal protein S15A9.9e-3250.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM

AT2G19720.1 ribosomal protein S15A B2.0e-5678.29Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAE+RGKA+VELKP+S+VMS+FLK+MK+ GYI +FQVHDP RVGRITV+LQGR+ DCKALTYRQD+KA EI  Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQMFLILH
        +VITTP+GILDHEEAIKRNVGGQ+    H
Subjt:  VVITTPEGILDHEEAIKRNVGGQMFLILH

AT4G29430.1 ribosomal protein S15A E8.9e-5782.26Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAERRGKA+VELKPIS+VMS+FL++MK+ GYI +FQV+DP RVGRITV+LQGR+ DCKALTYRQD++AKEIE Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQM
        VVITTP+GILDHEEAIKRNVGGQ+
Subjt:  VVITTPEGILDHEEAIKRNVGGQM

AT5G59850.1 Ribosomal protein S8 family protein9.9e-3250.83Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQM
        T  GI+DHEEA ++NVGG++
Subjt:  TPEGILDHEEAIKRNVGGQM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGGATATTGAACGATGCATTAAGAGCGATTGTCAATGCTGAGAGGAGGGGAAAAGCTACGGTGGAACTCAAACCCATTTCTTCTGTTATGTCTGCCTTCCT
TAAAGTCATGAAAGATCATGGATATATCAATGACTTTCAAGTTCATGATCCACAACGAGTTGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCTC
TCACCTACAGGCAGGACATCAAGGCAAAGGAAATTGAAGCTTACAGAATACGAACGCTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTG
GATCATGAAGAGGCAATAAAAAGGAATGTTGGTGGTCAGATGTTTCTCATTTTGCATTGGGATCTTAGGACTTTGAGCACTGTTGTCCACTTTTTCAGTATTATTGCTCT
TACCAATAACTTTAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTGAGCCAACCGCGCCGTCGTTTCCTCTTCTGCCTCACCGCCTCCATTTCTTCCACCGCAGTTCGGAGTTGTATCTCGAGTTAGGGCTGAGCCAACCGCGCCGTCGTTTT
CTATTCTGCCTCACCGGTTCAAATAGGTCGCAGGTTTTGTGACTTTTCGTGTACTCTAAGATATGGGTAGGAGGATATTGAACGATGCATTAAGAGCGATTGTCAATGCT
GAGAGGAGGGGAAAAGCTACGGTGGAACTCAAACCCATTTCTTCTGTTATGTCTGCCTTCCTTAAAGTCATGAAAGATCATGGATATATCAATGACTTTCAAGTTCATGA
TCCACAACGAGTTGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCTCTCACCTACAGGCAGGACATCAAGGCAAAGGAAATTGAAGCTTACAGAA
TACGAACGCTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATAAAAAGGAATGTTGGTGGTCAGATGTTTCTC
ATTTTGCATTGGGATCTTAGGACTTTGAGCACTGTTGTCCACTTTTTCAGTATTATTGCTCTTACCAATAACTTTAAAGTTTAA
Protein sequenceShow/hide protein sequence
MGRRILNDALRAIVNAERRGKATVELKPISSVMSAFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTYRQDIKAKEIEAYRIRTLPTRQWGYVVITTPEGIL
DHEEAIKRNVGGQMFLILHWDLRTLSTVVHFFSIIALTNNFKV