; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G001060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G001060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr08:558752..561190
RNA-Seq ExpressionCmoCh08G001060
SyntenyCmoCh08G001060
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR033443 - Pentacotripeptide-repeat region of PRORP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592896.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-29298.83Show/hide
Query:  METCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQ
        METCVLHCCYDPFRLRSKHP SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLLLLRQ
Subjt:  METCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQ

Query:  HGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFI
        HGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA+LFI
Subjt:  HGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFI

Query:  DEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK
        DEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK
Subjt:  DEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDK

Query:  MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMK
        MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMK
Subjt:  MEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMK

Query:  DFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDL
        DFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDL
Subjt:  DFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDL

Query:  VYENQGGMGLKTR
        VYENQGGMGLKTR
Subjt:  VYENQGGMGLKTR

KAG7025298.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-29298.26Show/hide
Query:  METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
        METCVLHCCYDPFRLRSKHPS    SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKR SCPLL
Subjt:  METCVLHCCYDPFRLRSKHPS----SSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL

Query:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
        LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
Subjt:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA

Query:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
        +LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Subjt:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG

Query:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
        ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
Subjt:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY

Query:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
        LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAW++MNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
Subjt:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE

Query:  LIDLVYENQGGMGLKTR
        LIDLVYENQGGMGLKTR
Subjt:  LIDLVYENQGGMGLKTR

XP_022959989.1 pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita moschata]2.5e-299100Show/hide
Query:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
        MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
Subjt:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL

Query:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
        LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
Subjt:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA

Query:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
        MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Subjt:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG

Query:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
        ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
Subjt:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY

Query:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
        LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
Subjt:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE

Query:  LIDLVYENQGGMGLKTR
        LIDLVYENQGGMGLKTR
Subjt:  LIDLVYENQGGMGLKTR

XP_023004999.1 pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita maxima]2.5e-28695.58Show/hide
Query:  MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSC
        MSVPMETCVLHCCYDPFRLR KH    SSS HPFDLNKGSSCL SRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSC
Subjt:  MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSC

Query:  PLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKF
        PLLLL+ HGDWNRDHFWLVVKFLRNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGLRPSLGTYNSLIHGFAARGKF
Subjt:  PLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKF

Query:  EIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
        EIAMLFIDEMKEINM READTYDGLIEAYGKYRMYDEMIECLKQMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
Subjt:  EIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA

Query:  KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILL
        KFGILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANE WN TVANILL
Subjt:  KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILL

Query:  LAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT
        LAYL+MKDFKRLRTLFSEIRAR VKPDIVTIGILLDANNKSFDGTRILEAWR+MNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLEL+GRE+KVWT
Subjt:  LAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT

Query:  YEELIDLVYENQGGMGLKTR
        YEELIDLV ENQGGMGLKTR
Subjt:  YEELIDLVYENQGGMGLKTR

XP_023514113.1 pentatricopeptide repeat-containing protein At4g14190, chloroplastic [Cucurbita pepo subsp. pepo]5.1e-29296.91Show/hide
Query:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
        MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSCPLL
Subjt:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL

Query:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
        LLR HGDWNRDHFWLVVKFLRNASRSHE+LKLFDTWKSIEGSRI+ESNYEKVIVLLSQDGLMEDAVS+FQDMKS+GLRPSLGTYN+LIHGFAARGKFEIA
Subjt:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA

Query:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
        MLFIDEMKEINMTRE DTYDGLIEAYGKYRMYDEMIECLKQMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Subjt:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG

Query:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
        ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKA EIWN TVANILLLAY
Subjt:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY

Query:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
        LKMKDFKRLRTLFSEIRARHVKPD+VTIGILLDANNKSFDGTR LEAWR+MN+LSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
Subjt:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE

Query:  LIDLVYENQGGMGLKTR
        LIDLVYENQGGM LKTR
Subjt:  LIDLVYENQGGMGLKTR

TrEMBL top hitse value%identityAlignment
A0A5C7IV15 Uncharacterized protein2.3e-16558.06Show/hide
Query:  LRSKHPSSSPHP---FDLNKGSSCLSSRIPLPEPYTKLLLSL---PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDH
        L + H    P P   F+ N      SS+  + +P     LS    P+   P H+P+KH TLLV+T+HEH TL+AL+  LQ   SCPLL+L   GDW +D 
Subjt:  LRSKHPSSSPHP---FDLNKGSSCLSSRIPLPEPYTKLLLSL---PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDH

Query:  FWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINM
        FW V+KFL+NASRS ++L++FD WK+IE SRINE NY+K+IV+L ++GLME+AV+S Q+MK+ GLRP L  YNS+IHG++  GKF+ A+LF++EMKEIN+
Subjt:  FWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINM

Query:  TREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRI
         R  DTY GLI+AYGK++MYDE+  CLK+M+LDGC PD+ITYNLLIREF++GGLL++ME L +S+LSKRM LQSSTL AMLE Y KFG+L+KME  Y+R+
Subjt:  TREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRI

Query:  LNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTL
        LNSK  +KEDLIR LA VYIQN+M+SR++ LG D+  + G+T+LVWCL LLSHACL SRRGMDSV+QEM+++   WN +VANI+LLAYLKMKDFK+LR L
Subjt:  LNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTL

Query:  FSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYEN
         SE+  R VKPD+VT+G++ DA+   F+ T  LE W++M+LL  +V++ TD LVL A+GKG FL+DCEE + SLE   RE + WTY+ LIDLV ++
Subjt:  FSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYEN

A0A5N5H5M2 Pentatricopeptide repeat-containing protein2.9e-16358.19Show/hide
Query:  LHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL--------PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLL
        +HC   P R  +   +S   P  L        +  P P+P T    SL        P  A P    TKH TLLV+TFHEH+ LK LL  +   D CPL L
Subjt:  LHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSL--------PTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLL

Query:  LRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAM
        L   GDW +D FW V+ FL N SRS E+L+LF+ WK IE SRINE NY K+I LLS++GLME+A   FQ+MKS  LRPSL  YNS+IHGFA +G F+ A+
Subjt:  LRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAM

Query:  LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGI
         +++EM+E+N+  E DTYDGLIEAYGKY+MYDEM  C+K+M+L+GC PDH+TYNLLIREFS+GGLLK+ME +Y+S+LSKRM LQSSTL+AMLE YAKFGI
Subjt:  LFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGI

Query:  LDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYL
        LDKME  Y R+LNS+T +K+DLIR LA VYI+N+M+SR+E LG+D+  + G+TDLVWCL LLSHA L SRRGMDS+VQEM + N  WNATVAN ++LAYL
Subjt:  LDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYL

Query:  KMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL
        KMKDF  LR L S++  + V+PDI+T+GIL DAN   +DG+  L+AW+K  LL R+VE+NTD LVL  FGKG FL++CE A++SLE   RE+K WTY  L
Subjt:  KMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEEL

Query:  IDLVYEN
        IDLV ++
Subjt:  IDLVYEN

A0A6J1DBE2 pentatricopeptide repeat-containing protein At4g14190, chloroplastic5.0e-22477.25Show/hide
Query:  METCVLHCCYDPFRLRSK---------HPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR-AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKR
        METCVLH  YD     SK         + SSS +PF LNK   C+ S+ P P+P    LLSL T  AVPTHSPTKHATLL+DTFH+H  LK LLS L K 
Subjt:  METCVLHCCYDPFRLRSK---------HPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTR-AVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKR

Query:  DSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAAR
        DSCPLLLL  HGDW+ DHFW+VVKFL  ASRSH++LKLFD WK+IE SRINESNYEKVIVLLS+DGLM+DA+S+FQDMKSIGL+PSLG YNSLIHGFAA+
Subjt:  DSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAAR

Query:  GKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLE
        G+FE AM F++EMK+INMTRE DTYDGLIEAYGKYRMYDEM++CLKQMELDGC PD ITYNLLIREFSKGGLLKKMEGLY+++LSKRMDLQSSTLVAMLE
Subjt:  GKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLE

Query:  AYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVAN
        AY KFGILDKMEMFYRRILNS+TN+KEDLIR LALV I+N MYSR+ETLG+D++IK GKTDLVWCL LLSHACLSSRRGMDSVVQEMDKANEIWN TVAN
Subjt:  AYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVAN

Query:  ILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESK
        I+LLAYLKMKDFKRLR  FSE+R RHVKPDIVTIGILLDANNK  +GT  LEAWR+MNLLSRAVE+NTDSLVLAAFGKG FLK CEE YA+LE   RE+K
Subjt:  ILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESK

Query:  VWTYEELIDLVYENQGGMGLKTR
        +WTYE LIDLV E +G  GLKTR
Subjt:  VWTYEELIDLVYENQGGMGLKTR

A0A6J1H9M9 pentatricopeptide repeat-containing protein At4g14190, chloroplastic1.2e-299100Show/hide
Query:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
        MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL
Subjt:  MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLL

Query:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
        LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA
Subjt:  LLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIA

Query:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
        MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG
Subjt:  MLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFG

Query:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
        ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY
Subjt:  ILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAY

Query:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
        LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE
Subjt:  LKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEE

Query:  LIDLVYENQGGMGLKTR
        LIDLVYENQGGMGLKTR
Subjt:  LIDLVYENQGGMGLKTR

A0A6J1KXW9 pentatricopeptide repeat-containing protein At4g14190, chloroplastic1.2e-28695.58Show/hide
Query:  MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSC
        MSVPMETCVLHCCYDPFRLR KH    SSS HPFDLNKGSSCL SRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEH TLKALLSDLQKRDSC
Subjt:  MSVPMETCVLHCCYDPFRLRSKH---PSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSC

Query:  PLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKF
        PLLLL+ HGDWNRDHFWLVVKFLRNASRSHE+LKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVS+FQDMKSIGLRPSLGTYNSLIHGFAARGKF
Subjt:  PLLLLRQHGDWNRDHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKF

Query:  EIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
        EIAMLFIDEMKEINM READTYDGLIEAYGKYRMYDEMIECLKQMELDGC PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA
Subjt:  EIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYA

Query:  KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILL
        KFGILDKMEMFYRRIL+SKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANE WN TVANILL
Subjt:  KFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILL

Query:  LAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT
        LAYL+MKDFKRLRTLFSEIRAR VKPDIVTIGILLDANNKSFDGTRILEAWR+MNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLEL+GRE+KVWT
Subjt:  LAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWT

Query:  YEELIDLVYENQGGMGLKTR
        YEELIDLV ENQGGMGLKTR
Subjt:  YEELIDLVYENQGGMGLKTR

SwissProt top hitse value%identityAlignment
O23278 Pentatricopeptide repeat-containing protein At4g14190, chloroplastic2.0e-12949.48Show/hide
Query:  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSH
        P P++LN  S   S+   +P P + L  SLP       S    AT      H HR L +L   L    SCPL LL++ GDW++DHFW V++FLR +SR H
Subjt:  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSH

Query:  EVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAY
        E+L +FDTWK++E SRI+E+NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE AM +++ MKE  +    +TYDGLIEAY
Subjt:  EVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAY

Query:  GKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT
        GK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGLLK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Subjt:  GKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT

Query:  LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDI
        LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A   WN T ANI LLAY KM DF  +  L SE+R +HVK D+
Subjt:  LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDI

Query:  VTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDLVYENQ
        VT+GI+ D +   FDGT +   W+K+  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++LV +NQ
Subjt:  VTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDLVYENQ

P0C7Q7 Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial3.6e-2224.11Show/hide
Query:  GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
        G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A+  + +M+E N+  +  TY  +I++  +    D  I   K
Subjt:  GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK

Query:  QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRI
        +ME  G     +TYN L+R   K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +       TL   Y   +  S  
Subjt:  QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRI

Query:  ETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK
          + +DL ++     D+V    L+   C+  R   GM  V + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Subjt:  ETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK

Query:  SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI
        +    + LE +  +      + I   + ++    KG  ++D    + SL   G +  V TY  +I
Subjt:  SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial9.9e-2023.22Show/hide
Query:  DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRM
        D ++ +E   I  S   Y  VI  L +DG  +DA+S F +M+  G++  + TY+SLI G    GK++     + EM   N+  +  T+  LI+ + K   
Subjt:  DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRM

Query:  YDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVY
          E  E   +M   G  PD ITYN LI  F K   L +   ++  ++SK  +    T   ++ +Y K   +D     +R I +           TL L +
Subjt:  YDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVY

Query:  IQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI
         Q+   +  + L  ++  +     +V   +LL   C +        + ++M K+       + NI++             +LF  +  + VKPD+VT  +
Subjt:  IQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI

Query:  LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQ
        ++    K    +     +RKM       +  T ++++ A   G  L    E    +++ G  +   T + +ID++ + +
Subjt:  LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQ

Q9LYZ9 Pentatricopeptide repeat-containing protein At5g028608.1e-2223.16Show/hide
Query:  YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCI
        Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E AM   +EM+         T++  I+ YG    + EM++   ++ + G  
Subjt:  YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCI

Query:  PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLH
        PD +T+N L+  F + G+  ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+     +  M+ + E +  ++ 
Subjt:  PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLH

Query:  I-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL
          +    +L +C LL ++A       M S+ +E+        A +   L+L   K          FSE++ R   PDI T+  ++
Subjt:  I-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL

Q9M2A1 Pentatricopeptide repeat-containing protein At3g426302.7e-2527.98Show/hide
Query:  RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQM
        +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A    DE+       +      LI AY ++  +DE+ +  K +
Subjt:  RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQM

Query:  ELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIET
                 +  +L I  F K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+ IR + L Y++   + R+  
Subjt:  ELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIET

Query:  LGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG
           D+ + +    +++W  +LLS+A     + +      M  A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Subjt:  LGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG

Query:  TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI
          +   + +MNL    + + TD L     GKG F    E   A LE   R  K WTY +LI
Subjt:  TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI

Arabidopsis top hitse value%identityAlignment
AT1G12700.1 ATP binding;nucleic acid binding;helicases2.6e-2324.11Show/hide
Query:  GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK
        G   + + +  +I  L  +G + +AV     M   G +P + TYNS+++G    G   +A+  + +M+E N+  +  TY  +I++  +    D  I   K
Subjt:  GSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLK

Query:  QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRI
        +ME  G     +TYN L+R   K G       L + ++S+ +     T   +L+ + K G L +    Y+ ++    +       TL   Y   +  S  
Subjt:  QMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRI

Query:  ETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK
          + +DL ++     D+V    L+   C+  R   GM  V + + K   + NA   +IL+  + +    K    LF E+ +  V PD++T GILLD    
Subjt:  ETLGIDLHIK-AGKTDLVWCLLLLSHACLSSR--RGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNK

Query:  SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI
        +    + LE +  +      + I   + ++    KG  ++D    + SL   G +  V TY  +I
Subjt:  SFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI

AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein7.0e-2123.22Show/hide
Query:  DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRM
        D ++ +E   I  S   Y  VI  L +DG  +DA+S F +M+  G++  + TY+SLI G    GK++     + EM   N+  +  T+  LI+ + K   
Subjt:  DTWKSIEGSRINES--NYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRM

Query:  YDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVY
          E  E   +M   G  PD ITYN LI  F K   L +   ++  ++SK  +    T   ++ +Y K   +D     +R I +           TL L +
Subjt:  YDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVY

Query:  IQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI
         Q+   +  + L  ++  +     +V   +LL   C +        + ++M K+       + NI++             +LF  +  + VKPD+VT  +
Subjt:  IQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMD-SVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGI

Query:  LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQ
        ++    K    +     +RKM       +  T ++++ A   G  L    E    +++ G  +   T + +ID++ + +
Subjt:  LLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQ

AT3G42630.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-2627.98Show/hide
Query:  RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQM
        +I   +Y  ++  LSQ  L + A   F   KS+ L P+  T  +L+  FA  G    A    DE+       +      LI AY ++  +DE+ +  K +
Subjt:  RINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQM

Query:  ELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIET
                 +  +L I  F K G L+ MEG+   + SK + L++ T   ++  Y+ FG LDKME  Y R+      ++E+ IR + L Y++   + R+  
Subjt:  ELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIET

Query:  LGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG
           D+ + +    +++W  +LLS+A     + +      M  A    + T  NI  LA+ +M  F  L      +R  ++ PD+VT G ++DA       
Subjt:  LGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFDG

Query:  TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI
          +   + +MNL    + + TD L     GKG F    E   A LE   R  K WTY +LI
Subjt:  TRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELI

AT4G14190.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-13049.48Show/hide
Query:  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSH
        P P++LN  S   S+   +P P + L  SLP       S    AT      H HR L +L   L    SCPL LL++ GDW++DHFW V++FLR +SR H
Subjt:  PHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNRDHFWLVVKFLRNASRSH

Query:  EVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAY
        E+L +FDTWK++E SRI+E+NYE++I  L ++  M +A+ +F+ M     L PSL  YNS+IH +A  GKFE AM +++ MKE  +    +TYDGLIEAY
Subjt:  EVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDM-KSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAY

Query:  GKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT
        GK++MYDE++ CLK+ME DGC+ DH+TYNLLIREFS+GGLLK+ME +Y+S++S++M L+ STL++MLEAYA+FG+++KME    +I+    ++ E L+R 
Subjt:  GKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRT

Query:  LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDI
        LA VYI+N M+SR++ LG  +   +  +T+L WCL LL HA L SR+G+D VV+EM++A   WN T ANI LLAY KM DF  +  L SE+R +HVK D+
Subjt:  LALVYIQNHMYSRIETLGIDLHI-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDI

Query:  VTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDLVYENQ
        VT+GI+ D +   FDGT +   W+K+  L + VE+ TD LV AAFGKG+FL+ CEE    SL     ESK WTY+ L++LV +NQ
Subjt:  VTIGILLDANNKSFDGTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEA-YASLELVGRESKVWTYEELIDLVYENQ

AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein5.7e-2323.16Show/hide
Query:  YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCI
        Y  +I   ++DG++++A+     M   G +P + TY +L+ GF   GK E AM   +EM+         T++  I+ YG    + EM++   ++ + G  
Subjt:  YEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYDGLIEAYGKYRMYDEMIECLKQMELDGCI

Query:  PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLH
        PD +T+N L+  F + G+  ++ G+++ +       +  T   ++ AY++ G  ++    YRR+L++          T+     +  M+ + E +  ++ 
Subjt:  PDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALVYIQNHMYSRIETLGIDLH

Query:  I-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL
          +    +L +C LL ++A       M S+ +E+        A +   L+L   K          FSE++ R   PDI T+  ++
Subjt:  I-KAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTCCCGATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAG
CAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTAT
TAGTCGACACTTTTCACGAACACCGTACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGATTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGA
GACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATCGAGGGATCGCGGATCAATGAAAG
TAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCTTTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTT
ACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTATGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGAT
GGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCT
TATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGG
AAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACTTTGGCTCTAGTT
TATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTG
TCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGA
AAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGAT
GGAACCAGAATTTTAGAGGCATGGAGAAAGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAA
AGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGAC
TGAAAACCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTCCCGATGGAAACTTGTGTTCTCCATTGTTGTTACGACCCCTTCCGACTCCGATCCAAACACCCTTCTTCTTCTCCACACCCTTTTGACCTTAATAAAGGCAG
CAGCTGCCTCTCCTCCAGAATCCCACTCCCAGAGCCCTACACCAAGCTTCTTCTATCCCTACCCACTCGCGCAGTTCCAACGCATAGTCCTACAAAGCATGCGACTCTAT
TAGTCGACACTTTTCACGAACACCGTACCCTAAAAGCTTTGCTCTCCGACCTCCAGAAAAGGGATTCCTGTCCTTTGCTATTACTTAGACAACATGGAGATTGGAACAGA
GACCATTTCTGGCTCGTTGTTAAATTCCTCAGAAATGCTTCAAGATCCCATGAAGTCCTTAAGCTATTTGATACATGGAAGAGCATCGAGGGATCGCGGATCAATGAAAG
TAACTATGAGAAAGTAATAGTTCTATTGAGTCAAGATGGTCTTATGGAGGATGCTGTATCATCTTTTCAAGATATGAAAAGTATTGGCCTTCGACCATCTTTAGGTACTT
ACAATTCGCTCATCCATGGTTTTGCTGCAAGGGGCAAGTTTGAAATTGCTATGCTTTTCATTGATGAGATGAAAGAAATCAATATGACTCGAGAAGCTGATACCTATGAT
GGCCTAATTGAAGCCTATGGAAAATATAGAATGTACGATGAGATGATCGAGTGTCTGAAACAGATGGAACTGGATGGATGTATTCCGGACCACATAACTTACAATTTGCT
TATCAGAGAGTTCTCCAAAGGTGGTTTGCTTAAAAAGATGGAAGGATTATACCGAAGCATTCTTTCAAAAAGAATGGATTTACAGTCATCTACCTTGGTTGCCATGTTGG
AAGCTTATGCCAAATTTGGTATCTTGGACAAAATGGAAATGTTCTACAGAAGGATCCTGAACTCAAAGACCAATATGAAGGAGGATCTAATCAGAACTTTGGCTCTAGTT
TATATTCAGAACCATATGTATTCAAGAATAGAGACCTTGGGTATCGATCTTCACATCAAAGCTGGGAAGACAGATCTTGTTTGGTGCCTGCTTCTTCTATCACATGCTTG
TCTATCAAGTCGAAGGGGTATGGACTCTGTTGTTCAGGAAATGGACAAAGCTAACGAAATTTGGAATGCGACTGTTGCAAACATTTTACTTCTAGCTTATTTGAAAATGA
AAGATTTTAAACGGCTCAGAACACTGTTCTCTGAAATACGAGCAAGACATGTGAAACCTGATATAGTAACCATTGGAATTCTATTAGATGCAAATAACAAAAGTTTTGAT
GGAACCAGAATTTTAGAGGCATGGAGAAAGATGAACTTGCTATCCAGAGCTGTGGAAATAAACACCGACTCGCTTGTTTTAGCTGCATTTGGAAAAGGGAGGTTCCTTAA
AGACTGTGAAGAGGCATACGCTTCCCTGGAACTTGTGGGTAGGGAAAGTAAAGTTTGGACTTATGAAGAACTCATTGATCTAGTTTATGAAAACCAGGGGGGAATGGGAC
TGAAAACCAGATAAAATAGCTTGGTATGCATGTGCCTGTATCAATTTTTTGTAGGGATTTGACGGCCATTGACAACCAGGAGAGCTTTACAGTGGGGAGTTTTATATGTT
TCGTTTGTTGTAAATTTGATGTACTTTTAATGGTTATTACTTCACTTGAATCAATGGGTAGTACAAGTAAGATTAGTTGGTATCTTTTTCTGCTAAAGCCCTGAAAAACA
ACTCTATTTCGTTAGATAATCTTTTATTCTTGTGTGCATCTGATTGAATCAAGTGAATAAGATACTCACAAATTTCTCCTTGATCGTCA
Protein sequenceShow/hide protein sequence
MSVPMETCVLHCCYDPFRLRSKHPSSSPHPFDLNKGSSCLSSRIPLPEPYTKLLLSLPTRAVPTHSPTKHATLLVDTFHEHRTLKALLSDLQKRDSCPLLLLRQHGDWNR
DHFWLVVKFLRNASRSHEVLKLFDTWKSIEGSRINESNYEKVIVLLSQDGLMEDAVSSFQDMKSIGLRPSLGTYNSLIHGFAARGKFEIAMLFIDEMKEINMTREADTYD
GLIEAYGKYRMYDEMIECLKQMELDGCIPDHITYNLLIREFSKGGLLKKMEGLYRSILSKRMDLQSSTLVAMLEAYAKFGILDKMEMFYRRILNSKTNMKEDLIRTLALV
YIQNHMYSRIETLGIDLHIKAGKTDLVWCLLLLSHACLSSRRGMDSVVQEMDKANEIWNATVANILLLAYLKMKDFKRLRTLFSEIRARHVKPDIVTIGILLDANNKSFD
GTRILEAWRKMNLLSRAVEINTDSLVLAAFGKGRFLKDCEEAYASLELVGRESKVWTYEELIDLVYENQGGMGLKTR