; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G001780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G001780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:1051479..1053847
RNA-Seq ExpressionCmoCh08G001780
SyntenyCmoCh08G001780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025375.1 hypothetical protein SDJN02_11870 [Cucurbita argyrosperma subsp. argyrosperma]7.8e-8392.02Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNGQ-------------LGNKCKYEETLVQPNQIVELFARGWSARGLQEKPSKGALVNE
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN               LGNKCKYEETLVQPNQIVELFARGWSARGLQEKPSKGALVNE
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNGQ-------------LGNKCKYEETLVQPNQIVELFARGWSARGLQEKPSKGALVNE

XP_008459845.1 PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]9.6e-4983.97Show/hide
Query:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF
        M+ +Q+DP+S  GV HE+SSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMT AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIF
Subjt:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF

Query:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG
        YVVGIVSSLS+LGRS++CC TAP PRKDF+G
Subjt:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG

XP_022960441.1 uncharacterized protein LOC111461173 [Cucurbita moschata]5.4e-60100Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN

XP_023004228.1 uncharacterized protein LOC111497622 [Cucurbita maxima]8.7e-5896.95Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSR QEDPQSGV +LHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN

XP_023515244.1 uncharacterized protein LOC111779335 [Cucurbita pepo subsp. pepo]2.1e-5999.24Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN

TrEMBL top hitse value%identityAlignment
A0A0A0KDL5 Uncharacterized protein3.3e-4781.68Show/hide
Query:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF
        M  +++DP+S  GV +E+SSLLLKILRSPPPPV FSDHVLELSS I+SSSSRILPSSQMT AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIF
Subjt:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF

Query:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG
        YVVGIVSSLSMLGRS++CC TAP PRKDF+G
Subjt:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG

A0A1S3CB48 uncharacterized protein LOC1034988454.6e-4983.97Show/hide
Query:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF
        M+ +Q+DP+S  GV HE+SSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMT AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIF
Subjt:  MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIF

Query:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG
        YVVGIVSSLS+LGRS++CC TAP PRKDF+G
Subjt:  YVVGIVSSLSMLGRSMLCCLTAPMPRKDFNG

A0A6J1DMY8 uncharacterized protein LOC111022584 isoform X13.3e-4780.43Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MM R +EDPQS   VLHE+SSLL+KILRSPPPPV FSDHVLELSSVISSSS  +LPSSQ+T AG ASLLLGISLALMLCGSVTFFLGF+LMPWILV  MI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNGQLGNKC
        FYVVGIVSSLSMLGRS+LCC +AP PRKDFN Q  + C
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNGQLGNKC

A0A6J1H7L5 uncharacterized protein LOC1114611732.6e-60100Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN

A0A6J1KYV0 uncharacterized protein LOC1114976224.2e-5896.95Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
        MMSR QEDPQSGV +LHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMI

Query:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
        FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN
Subjt:  FYVVGIVSSLSMLGRSMLCCLTAPMPRKDFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein2.7e-2552.59Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMP
        MM R +++ QS   V +++SSL+L +LRSPP P++  DH  +         SS   SSSS  L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMP
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMP

Query:  WILVFAMIFYVVGIVSSLSMLGRSMLC-CLTAPMP
        W+L   ++FYV GIVS++SM+GRS+LC  LT P P
Subjt:  WILVFAMIFYVVGIVSSLSMLGRSMLC-CLTAPMP

AT1G27290.2 unknown protein2.7e-2552.59Show/hide
Query:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMP
        MM R +++ QS   V +++SSL+L +LRSPP P++  DH  +         SS   SSSS  L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMP
Subjt:  MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMP

Query:  WILVFAMIFYVVGIVSSLSMLGRSMLC-CLTAPMP
        W+L   ++FYV GIVS++SM+GRS+LC  LT P P
Subjt:  WILVFAMIFYVVGIVSSLSMLGRSMLC-CLTAPMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTAGCTTTTTC
CGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGC
TGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTC
TCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACC
GAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATAG
mRNA sequenceShow/hide mRNA sequence
GATCCGGACTCCTCTAAATCCCGCTTGACCTGCTCTCCACCGTGTCTAATCCACGCGTTGTTCTTCTCTGAATTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATA
GTTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATTTCACACCCTACT
TCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCGAAGCCGCTATGAATTTCACCACCAAAACCGTTCT
GGGATTTCGTTGATTTGATTGGTTCATCGTTTATGGTTAGCCAATCGTCTCGGCTTTAGCGATCTGCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTT
GTTGTTCTTGTTTCTAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCT
CCGATCGCCGCCCCCGCCGGTAGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTG
GATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATT
TTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTCAGCTTGGAAACAA
ATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGA
ATGAATAGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTG
CTTTTAAGACTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTC
ATGGTGTCGGAGGTTTTGTGATGTCCCATGTGATGTCCCACGTTGGTTGGGGAGGAG
Protein sequenceShow/hide protein sequence
MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSL
SMLGRSMLCCLTAPMPRKDFNGQLGNKCKYEETLVQPNQIVELFARGWSARGLQEKPSKGALVNE