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CmoCh08G001790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G001790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationCmo_Chr08:1053587..1054794
RNA-Seq ExpressionCmoCh08G001790
SyntenyCmoCh08G001790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656810.1 uncharacterized protein LOC101208994 [Cucumis sativus]5.6e-2695.24Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

XP_022953200.1 uncharacterized protein LOC111455815 [Cucurbita moschata]5.6e-2696.83Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

XP_022960371.1 uncharacterized protein LOC111461116 [Cucurbita moschata]1.9e-26100Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

XP_022991384.1 uncharacterized protein LOC111488037 isoform X1 [Cucurbita maxima]5.6e-2696.83Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

XP_022991385.1 uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima]5.6e-2696.83Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KAG8 Uncharacterized protein2.7e-2695.24Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

A0A6J1H7E6 uncharacterized protein LOC1114611169.3e-27100Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

A0A6J1JSS9 uncharacterized protein LOC111488037 isoform X22.7e-2696.83Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

A0A6J1JUR0 uncharacterized protein LOC111488037 isoform X12.7e-2696.83Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAI+VHS+LYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

A0A6J1KVP8 uncharacterized protein LOC1114976239.3e-27100Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein7.1e-1963.49Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        M DWGPVFVAV LFVLLTPGLL Q+PG  R +EFG F TS  +++VH+L+YF L+C+ LLA++
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

AT3G48660.1 Protein of unknown function (DUF 3339)1.9e-1959.74Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIKPNRHFKQWQLHIWT
        MADWGPV VAVILFVLLTPGLLFQ+P   R +EFGN  TS A+I+VH++++FGLI +F +AI+         LHI+T
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIKPNRHFKQWQLHIWT

AT5G08391.1 Protein of unknown function (DUF 3339)1.4e-2273.02Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK
        M+DWGPV V VILFV+LTPGLLFQLPG ++ +EFGNF TSA +++VHSLLYF L+CVFLLA+K
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIK

AT5G40980.1 Protein of unknown function (DUF 3339)5.1e-1755.22Show/hide
Query:  ADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIKPNRHF
        ADWGPV VAV LF+LL+PGLLFQLP   R +EFGN  TS  +I+VH+++YF ++ + ++AI+ + HF
Subjt:  ADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIKPNRHF

AT5G63500.1 Protein of unknown function (DUF 3339)4.6e-1862.9Show/hide
Query:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAI
        MADWGPV +AVILFV+L+PGLLFQ+P   R +EFGN  TS A+I+VH++++FGLI +F +AI
Subjt:  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTGGGGGCCAGTTTTTGTGGCTGTCATTCTGTTTGTTTTGCTAACACCTGGGCTGCTTTTCCAGCTTCCTGGAAATCGAAGGTGCTTGGAGTTCGGCAACTT
TCACACCAGCGCTGCTGCTATCGTCGTTCATTCTCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCATCAAGCCTAACAGGCATTTCAAACAGTGGCAGTTAC
ACATATGGACTCAAAGTCTTAAAAGCAGGAAGATACACAACACAATGTCACTCCACAACCTCAAAAAACAACAAACGGTGGTAAATAATTCAAACTTCATCTTGCCTATA
TGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATTGGGGGCCAGTTTTTGTGGCTGTCATTCTGTTTGTTTTGCTAACACCTGGGCTGCTTTTCCAGCTTCCTGGAAATCGAAGGTGCTTGGAGTTCGGCAACTT
TCACACCAGCGCTGCTGCTATCGTCGTTCATTCTCTTCTCTACTTCGGTCTCATTTGCGTCTTCTTGCTCGCCATCAAGCCTAACAGGCATTTCAAACAGTGGCAGTTAC
ACATATGGACTCAAAGTCTTAAAAGCAGGAAGATACACAACACAATGTCACTCCACAACCTCAAAAAACAACAAACGGTGGTAAATAATTCAAACTTCATCTTGCCTATA
TGTTTCTAG
Protein sequenceShow/hide protein sequence
MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIVVHSLLYFGLICVFLLAIKPNRHFKQWQLHIWTQSLKSRKIHNTMSLHNLKKQQTVVNNSNFILPI
CF