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CmoCh08G002030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G002030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionnatterin-2-like
Genome locationCmo_Chr08:1187421..1188606
RNA-Seq ExpressionCmoCh08G002030
SyntenyCmoCh08G002030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592982.1 hypothetical protein SDJN03_12458, partial [Cucurbita argyrosperma subsp. sororia]3.3e-3758.49Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL
        +I+D+ VIVLAT EV NN +VP+T C+ FSYTN   S WASS+S KLDVKTTI++ +PLIV+ K IET S KF              T+E+ YEVT+PP 
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNY----YKTKTKSIC
        ST  VTL  TKGSCDVPFSY+QVD+L GGK+VE Y  +GIY+GTNY    Y+ KTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNY----YKTKTKSIC

KAG6592983.1 hypothetical protein SDJN03_12459, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4364.78Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFT--------------QEMVYEVTIPPL
        +I DQV  VLAT E ANNSNVPNT C+T S+TN  SSTW SSVSTKLDVKT IE  +PLIVDGK IETSS KF               QE+ YEVTIPP+
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFT--------------QEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNY----YKTKTKSIC
        S++ VTL  TKGSCDVPFSY+QVD+L+GGKKVEY L +G+Y+GTNY    Y+TKTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNY----YKTKTKSIC

XP_022960406.1 uncharacterized protein LOC111461141 [Cucurbita moschata]5.6e-3758.49Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL
        +I+D+ VIVLAT EV NN +VP+T C+ FSYTN   S WASS+S KLDVKTTI++ +PLIV+ K IET S KF              T+E+ YEVT+PP 
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC
        ST  VTL  TKGSCDVPFSY+QVD+L GGK+VE Y  +GIY+GTNYY    + KTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC

XP_023514585.1 uncharacterized protein LOC111778836 [Cucurbita pepo subsp. pepo]2.1e-3657.23Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL
        +I+D+ VIVLAT EV NN +VP+T C+ FSY N   S WASS+S KLDVKTTI++ +PLIV+ K IET S KF              T+E+ YE+T+PP 
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC
        ST  VTL  TKGSCDVPFSY+QVD+L GGK+VE Y  +GIY+GTNYY    + KTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC

XP_023514586.1 uncharacterized protein LOC111778837 [Cucurbita pepo subsp. pepo]8.1e-4465.41Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFT--------------QEMVYEVTIPPL
        +I DQV IVLAT E AN+SNVPNT C+ FS+TN  SSTW SSVSTKLDVKT IE  +PLIVDGK IETSS KF               QE+ YEVTIPP+
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFT--------------QEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNY----YKTKTKSIC
        S+I VTL  TKGSCDVPFSY+QVD+L+GGKKVEY L +G+Y+GTNY    Y+TKTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNY----YKTKTKSIC

TrEMBL top hitse value%identityAlignment
A0A6J1CVE2 uncharacterized protein LOC1110147369.4e-2239.74Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLST
        +I+DQ V+++AT    N +   NT  +  SYT+  SSTW SS+S KL + TTIE  +P I DGK+             +T ++  T E+ Y+V++PP++T
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLST

Query:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTN----YYKTKTKSI
        I V+L  TKG+CD+P+SY Q D L  G+ + Y + +G+Y+  N     Y+TK K+I
Subjt:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTN----YYKTKTKSI

A0A6J1CVM7 uncharacterized protein LOC1110146546.1e-2142.21Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKM------------IETSSAKFTQEMVYEVTIPPLST
        +I++Q V+V+AT    N + VPNT  +  SYT+  S+ W+SS+S KL V TT+EA +PLI DGK+              T ++  T +  YEVT+PP+++
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKM------------IETSSAKFTQEMVYEVTIPPLST

Query:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTN----YYKTKTK
        + V+L  TKG+CDVP+SY Q D L  G  V  ++ +G+Y+G N     Y+TKTK
Subjt:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTN----YYKTKTK

A0A6J1D9W8 uncharacterized protein LOC1110185553.8e-2343.92Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLST
        +++DQ+ +V+AT +  N + V NT  +  SYT   SSTW+SSVSTKL VKTT+E  +P I DGK+             ET +   T    Y+VT+PP+ST
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLST

Query:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK
        + V+L  TKG+CDVP+SY Q D L  G+   Y + +G+Y G N Y  K
Subjt:  INVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK

A0A6J1H7H4 uncharacterized protein LOC1114611412.7e-3758.49Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL
        +I+D+ VIVLAT EV NN +VP+T C+ FSYTN   S WASS+S KLDVKTTI++ +PLIV+ K IET S KF              T+E+ YEVT+PP 
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKF--------------TQEMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC
        ST  VTL  TKGSCDVPFSY+QVD+L GGK+VE Y  +GIY+GTNYY    + KTK IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVE-YSLNGIYYGTNYY----KTKTKSIC

A0A6J1H8Z5 uncharacterized protein LOC1114611405.3e-3352.83Show/hide
Query:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFTQ--------------EMVYEVTIPPL
        KI+++VVI+LAT E  NN NVPNT  +TFSY +N +S+WASS+STKLDVKT I++ +PL+ DG+  + SSAKF +              E++YE  IPP 
Subjt:  KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFTQ--------------EMVYEVTIPPL

Query:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK----TKSIC
        S   +TL VTKGS ++PFSY+Q DVL GGK+VEY L +GIY GTN+Y  K    T++IC
Subjt:  STINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK----TKSIC

SwissProt top hitse value%identityAlignment
Q66S25 Natterin-11.7e-0426.53Show/hide
Query:  VVIVLATTEVANNSNVPNTEC------VTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAK--------FTQEMVYEVT----IPPLS
        V ++    EV   S V N +C      VT S   +    W  + S    V TT+ A IP +    +  +  A+         T+   Y VT    +PP  
Subjt:  VVIVLATTEVANNSNVPNTEC------VTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAK--------FTQEMVYEVT----IPPLS

Query:  TINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSLNGIYYGTNYYKT
        +  V++       DVPF+   +   RGGKK + +  G+Y  T   +T
Subjt:  TINVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSLNGIYYGTNYYKT

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAA
GACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGG
ATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACT
TTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGT
GACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAA
AGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGT
GACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAA
GTCAATATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAA
GACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGG
ATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACT
TTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGT
GACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAA
AGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGT
GACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAA
GTCAATATGTTGA
Protein sequenceShow/hide protein sequence
MDKDGFFKRRIRHKIKRLIILTSTGLVGRRELTRKKKTNPNGRAHYFVPFMTVLINHFDFVTLSYGELVLLMEDVYVHNGRFLIEISAISLLTGNYCGHYLNLLLLKMKT
FISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLIVDGKMIETSSAKFTQEMVYEVTIPPLSTINVTLCVTKGSC
DVPFSYQQVDVLRGGKKVEYSLNGIYYGTNYYKTKTKSIC