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CmoCh08G002460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G002460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
Genome locationCmo_Chr08:1500291..1501207
RNA-Seq ExpressionCmoCh08G002460
SyntenyCmoCh08G002460
Gene Ontology termsGO:2000123 - positive regulation of stomatal complex development (biological process)
InterPro domainsIPR031753 - Stomagen
IPR038572 - Stomagen, C-terminal domain superfamily
IPR044858 - Stomagen, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593029.1 EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5299.09Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPLL LLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

XP_022959844.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata]1.3e-54100Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

XP_023004190.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita maxima]1.1e-5095.45Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPL  LLLLLLALILCSLCSTMALKGRFSTED++FAK LPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

XP_023514879.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita pepo subsp. pepo]2.6e-5298.18Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPL  LLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

XP_038899071.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida]7.9e-3373.91Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPE-----MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGN
        MAKAAKP + +LLLLL LI+  L STMA++G FST         PQF S+Q TIA E     MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGN
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPE-----MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGN

Query:  DPINSAYHYRCVCHR
        DPINSAYHYRCVCHR
Subjt:  DPINSAYHYRCVCHR

TrEMBL top hitse value%identityAlignment
A0A0A0KA17 EPIDERMAL PATTERNING FACTOR-like protein 93.1e-2771.11Show/hide
Query:  MALKGRFSTEDELFAKPLPQFRSVQTTIAP------EMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        MA++G FST D    +P+PQF S+Q TI P       +R  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  MALKGRFSTEDELFAKPLPQFRSVQTTIAP------EMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A445JP65 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform B4.2e-2473.08Show/hide
Query:  TEDELFAKPLPQFRS--VQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        TE+ +   P PQ          A +MRNSRRLMIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINS YHYRCVCHR
Subjt:  TEDELFAKPLPQFRS--VQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A6J1DR94 uncharacterized protein LOC1110236012.4e-2765.55Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDE-LFAKPL-PQFRSVQTTIAPEMRN-------SRRLMIGSTAPICTYNECRGCKYKCRAEQVP
        MAKAAKP   LLLLL  +I+      +A++G  + EDE L AK L PQF SV +T+A + +N       +RRLMIGSTAP CTYNECRGCKYKCRAEQVP
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDE-LFAKPL-PQFRSVQTTIAPEMRN-------SRRLMIGSTAPICTYNECRGCKYKCRAEQVP

Query:  VEGNDPINSAYHYRCVCHR
        VEGNDPINSAYHYRCVCHR
Subjt:  VEGNDPINSAYHYRCVCHR

A0A6J1H996 EPIDERMAL PATTERNING FACTOR-like protein 96.1e-55100Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

A0A6J1KTW3 EPIDERMAL PATTERNING FACTOR-like protein 95.3e-5195.45Show/hide
Query:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
        MAKAAKPL  LLLLLLALILCSLCSTMALKGRFSTED++FAK LPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS
Subjt:  MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINS

Query:  AYHYRCVCHR
        AYHYRCVCHR
Subjt:  AYHYRCVCHR

SwissProt top hitse value%identityAlignment
Q9SV72 EPIDERMAL PATTERNING FACTOR-like protein 94.1e-2473.53Show/hide
Query:  RSVQTTIA--PE---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        RS++ T++  P+   + + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  RSVQTTIA--PE---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

Arabidopsis top hitse value%identityAlignment
AT4G12970.1 stomagen2.9e-2573.53Show/hide
Query:  RSVQTTIA--PE---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        RS++ T++  P+   + + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  RSVQTTIA--PE---MRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCTGCGAAACCACTTCTTCGTCTTCTCCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGA
CGAACTTTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGATGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTA
CTTATAATGAATGTAGAGGATGCAAATACAAGTGCAGAGCCGAGCAAGTGCCAGTTGAAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGG
TAA
mRNA sequenceShow/hide mRNA sequence
CCATTCTCTCATTCTACAATTGCAGCAATTGGTTTCTTATCCTCTCTTTTCCAATGGCGAAAGCTGCGAAACCACTTCTTCGTCTTCTCCTCCTCCTTCTAGCCCTAATT
CTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGACGAACTTTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCC
CGAGATGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTACTTATAATGAATGTAGAGGATGCAAATACAAGTGCAGAGCCGAGCAAGTGCCAGTTG
AAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAATTTCATTTTAATCTCCCCAAATTTTTGTACCAATTTTCTTAGTTTTTTGTTCTT
TCCAAGACAATTTGAGAGGTAGACTTGAGTCCTACCTTCCTTGAGTCTATTTTGTTTGTGTTACATAAATTTTCGCGTCAGTTTTGTTGTAACACTTTTCGTTGGTTTTA
TTGATAATTGTTTAAATCAATAGCTTGTATGGATAACTAAATTAGATTTTTTTTCCTTCAAATTTTATCAAAGCAAATGAGTCCAATAC
Protein sequenceShow/hide protein sequence
MAKAAKPLLRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR