; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G002830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G002830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionferredoxin-2, mitochondrial
Genome locationCmo_Chr08:1758833..1759321
RNA-Seq ExpressionCmoCh08G002830
SyntenyCmoCh08G002830
Gene Ontology termsGO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576046.1 Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.1e-7490.24Show/hide
Query:  MAVANLHRFRQIHRLPAI--SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAVANLHR RQIHRLPAI  S SIF+R SASA AS+E+ SSSSKKVSDRIVKLFAIDPEGTKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAEC
Subjt:  MAVANLHRFRQIHRLPAI--SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

KAG6593066.1 Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.1e-8298.77Show/hide
Query:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
        MAVANLHR RQIHRLPAISYSIFTRGSASAV SSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
Subjt:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV

Query:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

KAG7025477.1 Ferredoxin-2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-8299.38Show/hide
Query:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
        MAVANLHR RQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
Subjt:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV

Query:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

XP_022960553.1 uncharacterized protein LOC111461255 [Cucurbita moschata]4.2e-83100Show/hide
Query:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
        MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
Subjt:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV

Query:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

XP_023004798.1 uncharacterized protein LOC111497990 [Cucurbita maxima]6.7e-8198.17Show/hide
Query:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAVANLHR RQIHRLPAISY  SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
Subjt:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

TrEMBL top hitse value%identityAlignment
A0A6J1CR41 uncharacterized protein LOC1110134141.4e-7185.98Show/hide
Query:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAVANLHR RQ +RLPAISY  SIF+R SASAVA+S   SSSS+KVSDRIVKLFAIDPEGT++E+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAEC
Subjt:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIA+EWLEKLPPRSYDEEYVLKR+SRVR LNKHSRLGCQV+LTPDLQGMVVAVPEPKPW+IP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

A0A6J1GP07 uncharacterized protein LOC1114561978.6e-7489.63Show/hide
Query:  MAVANLHRFRQIHRLPAI--SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAV NLHR RQIHRLPAI  S SIF+R SASA AS+E+ SSSSKKVSDRIVKLFAIDPEGTKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAEC
Subjt:  MAVANLHRFRQIHRLPAI--SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

A0A6J1H9A5 uncharacterized protein LOC1114612552.0e-83100Show/hide
Query:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
        MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV
Subjt:  MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEV

Query:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  SIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

A0A6J1JU11 uncharacterized protein LOC1114883562.1e-7288.41Show/hide
Query:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAVANLHR RQI RLPAISY  SIF+R SASA AS+++ SSSSKKVSDRIVKLFAIDPEGTKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAEC
Subjt:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIAQEWLEKLPPRSYDEEYVLKR+SRVRALNKHSRLGCQVILTP+LQGMVVAVPE KPW+IP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

A0A6J1L0K3 uncharacterized protein LOC1114979903.3e-8198.17Show/hide
Query:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
        MAVANLHR RQIHRLPAISY  SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC
Subjt:  MAVANLHRFRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAEC

Query:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Subjt:  EVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

SwissProt top hitse value%identityAlignment
P37193 Adrenodoxin-like protein 1, mitochondrial3.3e-0630.97Show/hide
Query:  KVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVIL
        K +D IV +  +D +G + ++ G  G  +L  LA+R  I+ E    E   AC+  C V +  ++L+KL      E+ +L        L ++SRLGCQ++L
Subjt:  KVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVIL

Query:  TPDLQGMVVAVPE
           ++GM + +P+
Subjt:  TPDLQGMVVAVPE

P43493 Rhodocoxin8.7e-0731.37Show/hide
Query:  IDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAV
        + P+GTK E+   TG+ +++A    G ID         + C A C V +   W +K P  S +E+ +L  +  V    + SRL CQ++++ D+ G++V +
Subjt:  IDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAV

Query:  PE
        PE
Subjt:  PE

Q05B51 Ferredoxin-2, mitochondrial1.1e-0631.43Show/hide
Query:  PAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSY
        PAI+      GS  A    E  +   ++  D +V +  +D  G +  + G  G  +L  LA R  +D E    E   ACS  C V ++++ L+ LPP   
Subjt:  PAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSY

Query:  DEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE
         E+ +L        L ++SRLGCQ++LTP+L+G    +P+
Subjt:  DEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE

Q6P4F2 Ferredoxin-2, mitochondrial5.1e-0733.33Show/hide
Query:  IVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQ
        +V +  +D  G +  + G  G  +L  LA R  +D E    E   ACS  C V ++++ L+ LPP    E+ +L        L ++SRLGCQ++LTP+L+
Subjt:  IVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQ

Query:  GMVVAVPE
        G    +P+
Subjt:  GMVVAVPE

Q9CPW2 Ferredoxin-2, mitochondrial5.1e-0732.2Show/hide
Query:  SSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLG
        ++ S ++   +V +  +D  G +  + G  G  +L  LA R  +D E    E   ACS  C V +++  L+ LPP    E+ +L        L ++SRLG
Subjt:  SSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLG

Query:  CQVILTPDLQGMVVAVPE
        CQ++LTP+L+G+  A+P+
Subjt:  CQVILTPDLQGMVVAVPE

Arabidopsis top hitse value%identityAlignment
AT3G07480.1 2Fe-2S ferredoxin-like superfamily protein9.4e-5771.71Show/hide
Query:  QIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKL
        QIHRL   + S+  R SA+   S+ +PS  SKKVSDRIVKL AIDP+G K++I+GL+GQTLL+AL + GLIDP SHRL+DI ACSAECEV IA+EWLEKL
Subjt:  QIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKL

Query:  PPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
        PPR+YDEEYVLKR+SR R LNKHSRLGCQV+LT +LQGMVVAVPE KPW+IP
Subjt:  PPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

AT4G05450.1 mitochondrial ferredoxin 14.2e-0429.11Show/hide
Query:  NLHRF--RQIHRLPAI------SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSA
        NLHR     +  LP +      S   +   S     SS T S +  + +++I  +F +D +G +  +    G ++L+A A+   ID E    E   ACS 
Subjt:  NLHRF--RQIHRLPAI------SYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSA

Query:  ECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVP
           + +  E+  KL   + +E  +L        L + SRLGCQVI  P+L G+ +A+P
Subjt:  ECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCGCGAACCTCCACAGGTTCCGCCAAATCCACCGTCTGCCGGCGATTAGCTACTCCATTTTCACAAGAGGCTCAGCGTCGGCCGTCGCCTCGTCGGAAACCCC
ATCGTCCTCGTCCAAAAAGGTGTCAGATCGCATCGTCAAACTGTTCGCGATTGATCCGGAGGGCACGAAGAAGGAGATTGTCGGATTGACCGGCCAGACTCTTCTGAAGG
CGCTCGCTAATCGGGGTCTGATTGACCCCGAATCCCATCGATTGGAAGACATCAGCGCGTGTTCGGCCGAATGCGAGGTCAGTATTGCTCAGGAGTGGCTCGAGAAGCTG
CCGCCGCGGTCCTACGATGAGGAGTATGTGCTGAAGAGAAATTCTAGGGTTAGGGCTTTGAACAAGCACTCGAGGCTGGGCTGCCAGGTTATTCTCACCCCCGACCTTCA
AGGTATGGTTGTTGCTGTCCCCGAGCCCAAACCTTGGGAGATTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCGCGAACCTCCACAGGTTCCGCCAAATCCACCGTCTGCCGGCGATTAGCTACTCCATTTTCACAAGAGGCTCAGCGTCGGCCGTCGCCTCGTCGGAAACCCC
ATCGTCCTCGTCCAAAAAGGTGTCAGATCGCATCGTCAAACTGTTCGCGATTGATCCGGAGGGCACGAAGAAGGAGATTGTCGGATTGACCGGCCAGACTCTTCTGAAGG
CGCTCGCTAATCGGGGTCTGATTGACCCCGAATCCCATCGATTGGAAGACATCAGCGCGTGTTCGGCCGAATGCGAGGTCAGTATTGCTCAGGAGTGGCTCGAGAAGCTG
CCGCCGCGGTCCTACGATGAGGAGTATGTGCTGAAGAGAAATTCTAGGGTTAGGGCTTTGAACAAGCACTCGAGGCTGGGCTGCCAGGTTATTCTCACCCCCGACCTTCA
AGGTATGGTTGTTGCTGTCCCCGAGCCCAAACCTTGGGAGATTCCTTAA
Protein sequenceShow/hide protein sequence
MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKL
PPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP