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CmoCh08G003260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G003260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationCmo_Chr08:2032833..2034518
RNA-Seq ExpressionCmoCh08G003260
SyntenyCmoCh08G003260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0837.58Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDSGENKS-------------------------------------------------------------------
        M WSDEED SSS ESSLSQSDSDADEDSG+ K+                                                                   
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDSGENKS-------------------------------------------------------------------

Query:  ------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV
                 +RQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+A RG+    E K  +
Subjt:  ------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV

KAG7025513.1 hypothetical protein SDJN02_12008, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3155.56Show/hide
Query:  MKWSDEEDKSSSIESSLSQSDSDADEDSGENKSK------------------------------------------------------------------
        MKWSDEEDKSSSIESSLSQSDSDADEDS   K K                                                                  
Subjt:  MKWSDEEDKSSSIESSLSQSDSDADEDSGENKSK------------------------------------------------------------------

Query:  ------LSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENVEGMQTHAISCSNKAFT
                +RQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRA RGERLCRERKENVEGMQTHAISCSNKAFT
Subjt:  ------LSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENVEGMQTHAISCSNKAFT

XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]7.3e-1139.52Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------
        MK+ M WSDEED SSS +SSLSQSDSDADEDSGE K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------

Query:  -------------SKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERK
                      +RQKTRAA EN EQLLT QTR+EK N+SFSQKEKRKRE G+A RG+    E K
Subjt:  -------------SKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERK

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]4.8e-1038.46Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKS---------------------------------------------------------------
        MK+AM WSDEED SSS ESSLSQSDSDADEDSG+ K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKS---------------------------------------------------------------

Query:  ----------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV
                     +RQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+A RG+    E K  +
Subjt:  ----------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]4.8e-1038.46Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSG-------------------------------------------------------------------
        MK+AM WSDEED SSS ESSLSQSDSDADEDSG                                                                   
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSG-------------------------------------------------------------------

Query:  ------ENKSKLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV
              E +    +RQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+A RG+    E K  +
Subjt:  ------ENKSKLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV

TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein2.6e-0636.16Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------
        MK+AM WSDEED S    SSLSQSDSD DED+GE K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------

Query:  -------------SKRQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRAGRGERLCRERK
                      +RQKTRAA EN EQLLT QTR+          EK NVSFSQKEKRKRE G+A RG+    E K
Subjt:  -------------SKRQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRAGRGERLCRERK

A0A5D3DRL7 UPF0690 protein C1orf52-like protein2.6e-0636.16Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------
        MK+AM WSDEED S    SSLSQSDSD DED+GE K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------

Query:  -------------SKRQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRAGRGERLCRERK
                      +RQKTRAA EN EQLLT QTR+          EK NVSFSQKEKRKRE G+A RG+    E K
Subjt:  -------------SKRQKTRAAFENREQLLTVQTRE----------EKNNVSFSQKEKRKREPGRAGRGERLCRERK

A0A6J1DAL0 UPF0690 protein C1orf52 homolog3.6e-1139.52Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------
        MK+ M WSDEED SSS +SSLSQSDSDADEDSGE K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKL-------------------------------------------------------------

Query:  -------------SKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERK
                      +RQKTRAA EN EQLLT QTR+EK N+SFSQKEKRKRE G+A RG+    E K
Subjt:  -------------SKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERK

A0A6J1GNF0 UPF0690 protein C1orf52 homolog2.3e-1038.46Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKS---------------------------------------------------------------
        MK+AM WSDEED SSS ESSLSQSDSDADEDSG+ K+                                                               
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKS---------------------------------------------------------------

Query:  ----------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV
                     +RQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+A RG+    E K  +
Subjt:  ----------KLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV

A0A6J1JUH2 UPF0690 protein C1orf52 homolog2.3e-1038.46Show/hide
Query:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSG-------------------------------------------------------------------
        MK+AM WSDEED SSS ESSLSQSDSDADEDSG                                                                   
Subjt:  MKKAMKWSDEEDKSSSIESSLSQSDSDADEDSG-------------------------------------------------------------------

Query:  ------ENKSKLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV
              E +    +RQKTRAA EN EQLLT  T++EK N+SFSQKEKRKRE G+A RG+    E K  +
Subjt:  ------ENKSKLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGATTTTGGCAAATTGGAGTTGCTTTGTGATGAAAAAGGCTATGAAATGGAGTGATGAAGAGGACAAGTCGTCATCTATAGAGTCGTCTTTATCACAGTCGGA
TTCAGACGCTGATGAGGATAGTGGCGAGAATAAAAGCAAACTTTCGAAGAGACAGAAAACAAGAGCTGCATTCGAAAATAGAGAGCAGCTGCTAACCGTGCAAACTCGGG
AGGAGAAGAATAATGTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCCCGGTCGGGCAGGCAGGGGGGAAAGGCTATGTAGAGAAAGAAAAGAGAATGTTGAGGGA
ATGCAAACCCATGCAATCAGCTGTTCTAACAAAGCATTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGATTTTGGCAAATTGGAGTTGCTTTGTGATGAAAAAGGCTATGAAATGGAGTGATGAAGAGGACAAGTCGTCATCTATAGAGTCGTCTTTATCACAGTCGGA
TTCAGACGCTGATGAGGATAGTGGCGAGAATAAAAGCAAACTTTCGAAGAGACAGAAAACAAGAGCTGCATTCGAAAATAGAGAGCAGCTGCTAACCGTGCAAACTCGGG
AGGAGAAGAATAATGTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCCCGGTCGGGCAGGCAGGGGGGAAAGGCTATGTAGAGAAAGAAAAGAGAATGTTGAGGGA
ATGCAAACCCATGCAATCAGCTGTTCTAACAAAGCATTCACATGA
Protein sequenceShow/hide protein sequence
MYSILANWSCFVMKKAMKWSDEEDKSSSIESSLSQSDSDADEDSGENKSKLSKRQKTRAAFENREQLLTVQTREEKNNVSFSQKEKRKREPGRAGRGERLCRERKENVEG
MQTHAISCSNKAFT