; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G003330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G003330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLysine-rich arabinogalactan protein like
Genome locationCmo_Chr08:2063215..2064252
RNA-Seq ExpressionCmoCh08G003330
SyntenyCmoCh08G003330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593108.1 hypothetical protein SDJN03_12584, partial [Cucurbita argyrosperma subsp. sororia]1.8e-11198.07Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSR G+FTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPVC PSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

KAG7025517.1 hypothetical protein SDJN02_12013, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-11197.58Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSR G+FTIKEDREENQNRLSNQSGTGFRPVPLE+SSIPVC PSSPKIQPPSTDCNPKPISPTPRSDPIPI+PEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

XP_022960408.1 uncharacterized protein LOC111461143 [Cucurbita moschata]5.1e-114100Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

XP_023004233.1 uncharacterized protein LOC111497628 [Cucurbita maxima]8.2e-9696.76Show/hide
Query:  MSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDDFDEHCCYNKSSSYPELWAGPTY
        MSRFG+FTIKEDREENQNRLSNQSGTGFRPVPLEISSIPV  PSSPKIQPPSTDCNPKPISPTPRSDPIPIN EICDDFDEHCCY+KSSSYPELWAGPTY
Subjt:  MSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDDFDEHCCYNKSSSYPELWAGPTY

Query:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE
        SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVD ATRTLKQILHLDIDSE
Subjt:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE

XP_023514559.1 uncharacterized protein LOC111778815 [Cucurbita pepo subsp. pepo]4.3e-11399.52Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVC PSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

TrEMBL top hitse value%identityAlignment
A0A1S3BR78 uncharacterized protein LOC1034926542.4e-4556.48Show/hide
Query:  EFYSAMKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINP
        EF SAM+TL+IVEQYR EF    K L  SRFG+ TIK+      NRL       FRP PLEISSIPV + SSPK  PP                PIPIN 
Subjt:  EFYSAMKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINP

Query:  EIC----DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD
        +IC     DFDEHCCY K  S+PELWAGPTYSNSPPASSLP+P FSIR N  +SL+ PT S    + +   IVKSAPPSPTRG+ H   SSRE  H  D 
Subjt:  EIC----DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD

Query:  ATRTLKQILHLDIDSE
        ATRTL++IL+LD++SE
Subjt:  ATRTLKQILHLDIDSE

A0A5D3DRH9 Uncharacterized protein2.4e-4556.48Show/hide
Query:  EFYSAMKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINP
        EF SAM+TL+IVEQYR EF    K L  SRFG+ TIK+      NRL       FRP PLEISSIPV + SSPK  PP                PIPIN 
Subjt:  EFYSAMKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINP

Query:  EIC----DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD
        +IC     DFDEHCCY K  S+PELWAGPTYSNSPPASSLP+P FSIR N  +SL+ PT S    + +   IVKSAPPSPTRG+ H   SSRE  H  D 
Subjt:  EIC----DDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD

Query:  ATRTLKQILHLDIDSE
        ATRTL++IL+LD++SE
Subjt:  ATRTLKQILHLDIDSE

A0A6J1D941 uncharacterized protein LOC1110183968.4e-4656.68Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEIC--
        M+ L+I+EQYR EF +    L  +RFG+  IKE R + +NR S      FRP PLEISSIPV   S       S D N  PIS T R+ PIPINP +C  
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEIC--

Query:  --DDFDEHCCYN-KSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGH-----NHRPSSSRELFHGVD
           D DE  CYN KS S+PELWAGPTYSNSPPASSLP+P FSIR+   +SL+LP  S A+++ +  PIVKSAPPSPTRGH     NH P S+RE FHG D
Subjt:  --DDFDEHCCYN-KSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGH-----NHRPSSSRELFHGVD

Query:  DATRTLKQILHLDIDSE
         ATRTL++IL+L IDSE
Subjt:  DATRTLKQILHLDIDSE

A0A6J1H8U6 uncharacterized protein LOC1114611432.5e-114100Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
        MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDD

Query:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
        FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL
Subjt:  FDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQIL

Query:  HLDIDSE
        HLDIDSE
Subjt:  HLDIDSE

A0A6J1KYV4 uncharacterized protein LOC1114976284.0e-9696.76Show/hide
Query:  MSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDDFDEHCCYNKSSSYPELWAGPTY
        MSRFG+FTIKEDREENQNRLSNQSGTGFRPVPLEISSIPV  PSSPKIQPPSTDCNPKPISPTPRSDPIPIN EICDDFDEHCCY+KSSSYPELWAGPTY
Subjt:  MSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTPRSDPIPINPEICDDFDEHCCYNKSSSYPELWAGPTY

Query:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE
        SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVD ATRTLKQILHLDIDSE
Subjt:  SNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDATRTLKQILHLDIDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein4.6e-2034.88Show/hide
Query:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTP-----RSDPIPI--
        M+TL++  ++R +++   K+LG  RF     K  R+ N      QSG G  P P   SS P+   +  ++Q P +  +  P+   P     R+ PIPI  
Subjt:  MKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPISPTP-----RSDPIPI--

Query:  --NPEICDDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD
            +I     E     +S SY ELWAGPTYSNSPP +S+P+P FS+++   +SL  P   +A  IR    + KSAP SPT       SS    F     
Subjt:  --NPEICDDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDD

Query:  ATRTLKQILHLDIDS
        AT TL+++L+L++++
Subjt:  ATRTLKQILHLDIDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAATTCAGTCAAAACAGGGACAAATACCGTAAACTTCATAGCGAGCCAAGGCCGGCTACCGAGTTTTATTCTGCCATGAAAACCTTGATGATTGTAGAACAGTA
CAGATATGAGTTCTTCACTCTGTTCAAGAATCTAGGTATGAGTCGATTTGGGGATTTTACGATTAAAGAAGACAGAGAGGAAAATCAAAATCGATTGAGTAATCAATCGG
GGACAGGATTTCGCCCTGTTCCATTGGAGATTTCTTCGATTCCTGTTTGTCATCCTTCTTCCCCAAAGATTCAACCCCCTTCGACTGATTGTAACCCTAAACCGATTTCA
CCAACTCCAAGAAGTGATCCAATTCCGATTAATCCTGAAATTTGTGATGATTTTGATGAACATTGCTGTTATAATAAGAGTTCATCCTACCCTGAGCTTTGGGCTGGACC
AACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAATTTCTCAATTCGAAGAAATATAATTTTGTCACTCCAATTGCCCACCGGTTCAACCGCTCAAGCAA
TCAGAAGAACTCAACCAATTGTGAAATCTGCACCACCATCCCCAACGCGGGGCCATAACCATCGCCCTTCCTCTTCTAGAGAGCTATTTCATGGTGTTGATGATGCAACA
AGAACACTCAAACAAATTCTTCACCTCGATATTGACTCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAATTCAGTCAAAACAGGGACAAATACCGTAAACTTCATAGCGAGCCAAGGCCGGCTACCGAGTTTTATTCTGCCATGAAAACCTTGATGATTGTAGAACAGTA
CAGATATGAGTTCTTCACTCTGTTCAAGAATCTAGGTATGAGTCGATTTGGGGATTTTACGATTAAAGAAGACAGAGAGGAAAATCAAAATCGATTGAGTAATCAATCGG
GGACAGGATTTCGCCCTGTTCCATTGGAGATTTCTTCGATTCCTGTTTGTCATCCTTCTTCCCCAAAGATTCAACCCCCTTCGACTGATTGTAACCCTAAACCGATTTCA
CCAACTCCAAGAAGTGATCCAATTCCGATTAATCCTGAAATTTGTGATGATTTTGATGAACATTGCTGTTATAATAAGAGTTCATCCTACCCTGAGCTTTGGGCTGGACC
AACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAATTTCTCAATTCGAAGAAATATAATTTTGTCACTCCAATTGCCCACCGGTTCAACCGCTCAAGCAA
TCAGAAGAACTCAACCAATTGTGAAATCTGCACCACCATCCCCAACGCGGGGCCATAACCATCGCCCTTCCTCTTCTAGAGAGCTATTTCATGGTGTTGATGATGCAACA
AGAACACTCAAACAAATTCTTCACCTCGATATTGACTCTGAATGA
Protein sequenceShow/hide protein sequence
MSQFSQNRDKYRKLHSEPRPATEFYSAMKTLMIVEQYRYEFFTLFKNLGMSRFGDFTIKEDREENQNRLSNQSGTGFRPVPLEISSIPVCHPSSPKIQPPSTDCNPKPIS
PTPRSDPIPINPEICDDFDEHCCYNKSSSYPELWAGPTYSNSPPASSLPMPNFSIRRNIILSLQLPTGSTAQAIRRTQPIVKSAPPSPTRGHNHRPSSSRELFHGVDDAT
RTLKQILHLDIDSE