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CmoCh08G003580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G003580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHMA domain-containing protein
Genome locationCmo_Chr08:2223513..2225221
RNA-Seq ExpressionCmoCh08G003580
SyntenyCmoCh08G003580
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057596.1 hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]3.5e-2237.24Show/hide
Query:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV--------------------ASAAFRDSVH----QNIPSAASDPHCNKID
        V SV ++IQ GLV I+    FDP   V+ +++TGK A+       APAP                     A AA  D+      +N  S  S+ HC K +
Subjt:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV--------------------ASAAFRDSVH----QNIPSAASDPHCNKID

Query:  WTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-PAMPPGNGYYR
         T    N   G        S KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S GF   M EP     PP  P  AM P + YYR
Subjt:  WTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-PAMPPGNGYYR

Query:  WSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        W EP PYY Q+Q PP   V   P HYLFNDEN + C II
Subjt:  WSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

KAG6593135.1 hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]4.3e-10595.48Show/hide
Query:  DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPP
        DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGY APAP ASAA RDSVH NIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPP
Subjt:  DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPP

Query:  VDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPL----PPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        VDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPL    PPAMPPAMPPG+GYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
Subjt:  VDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPL----PPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

KGN45423.2 hypothetical protein Csa_015802, partial [Cucumis sativus]1.3e-1338.89Show/hide
Query:  APAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGS------SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGF
        APAP A+++   S H   +  S  S+ HC K D   +    S       KVH NEAA   PPV +P  +R+ +R         P  Q+G  +G   S GF
Subjt:  APAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGS------SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGF

Query:  GRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVD
           M EP   P  P      PP + YYRW EP PYY Q+Q PP   V   P HY+FNDEN +
Subjt:  GRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVD

TYK20998.1 hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]1.4e-1540.24Show/hide
Query:  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRG
        AP A++      H +N  S  S+ HC K + T    N   G        S KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S G
Subjt:  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRG

Query:  FGRPMMEPLPQPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        F   M EP     PP  P  AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Subjt:  FGRPMMEPLPQPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

XP_022150205.1 heavy metal-associated isoprenylated plant protein 42-like [Momordica charantia]5.7e-0931.22Show/hide
Query:  METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNI
        ME   A  D  YVLRVN++CCN CP ++   LLR+  VKSVAID  KGLVT++ +   DP+ +++ + + GK A+L    +    P    +   S     
Subjt:  METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNI

Query:  PSAASDPHCNKIDW--TQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP-
             D    + DW     CVP        E      P   P    L   P +  G     +    G     P  QP+P      + P +GYY  S+PP 
Subjt:  PSAASDPHCNKIDW--TQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP-

Query:  -------PYYWQQQPPPAPAV
               PY+  Q PP A  V
Subjt:  -------PYYWQQQPPPAPAV

TrEMBL top hitse value%identityAlignment
A0A022PZY8 HMA domain-containing protein9.0e-0847.22Show/hide
Query:  PSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQP
        P + T VL ++L CC  CPN ++N LLR+P V SV+ID +KGLV +T     DP T++  +S  GK  RL P
Subjt:  PSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQP

A0A0A0K5U2 Uncharacterized protein1.0e-1934.19Show/hide
Query:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPM----------------------GYVAPAPVASAAFRDSVH--QNIPSAASDPHCNKID
        V SV ++I+ GLV I+    FDP   ++ +++ GK A+   M                         APAP A+++   S H   +  S  S+ HC K D
Subjt:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPM----------------------GYVAPAPVASAAFRDSVH--QNIPSAASDPHCNKID

Query:  WTQNCVPGS------SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP
           +    S       KVH NEAA   PPV +P  +R+ +R         P  Q+G  +G   S GF   M EP   P  P      PP + YYRW EP 
Subjt:  WTQNCVPGS------SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP

Query:  PYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        PYY Q+Q PP   V   P HY+FNDEN + C I+
Subjt:  PYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

A0A5A7UTY4 Uncharacterized protein1.7e-2237.24Show/hide
Query:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV--------------------ASAAFRDSVH----QNIPSAASDPHCNKID
        V SV ++IQ GLV I+    FDP   V+ +++TGK A+       APAP                     A AA  D+      +N  S  S+ HC K +
Subjt:  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV--------------------ASAAFRDSVH----QNIPSAASDPHCNKID

Query:  WTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-PAMPPGNGYYR
         T    N   G        S KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S GF   M EP     PP  P  AM P + YYR
Subjt:  WTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-PAMPPGNGYYR

Query:  WSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        W EP PYY Q+Q PP   V   P HYLFNDEN + C II
Subjt:  WSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

A0A5D3DBX5 Uncharacterized protein6.8e-1640.24Show/hide
Query:  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRG
        AP A++      H +N  S  S+ HC K + T    N   G        S KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S G
Subjt:  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRG

Query:  FGRPMMEPLPQPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII
        F   M EP     PP  P  AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Subjt:  FGRPMMEPLPQPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

A0A6J1D7U6 heavy metal-associated isoprenylated plant protein 42-like2.8e-0931.22Show/hide
Query:  METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNI
        ME   A  D  YVLRVN++CCN CP ++   LLR+  VKSVAID  KGLVT++ +   DP+ +++ + + GK A+L    +    P    +   S     
Subjt:  METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNI

Query:  PSAASDPHCNKIDW--TQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP-
             D    + DW     CVP        E      P   P    L   P +  G     +    G     P  QP+P      + P +GYY  S+PP 
Subjt:  PSAASDPHCNKIDW--TQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP-

Query:  -------PYYWQQQPPPAPAV
               PY+  Q PP A  V
Subjt:  -------PYYWQQQPPPAPAV

SwissProt top hitse value%identityAlignment
Q0WV37 Heavy metal-associated isoprenylated plant protein 344.0e-0538.81Show/hide
Query:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL
        +T VL+VN+  C  C ++VK  L ++  V SV  D+++G VT+T N   DP  +V+ +S++GK A +
Subjt:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL

Arabidopsis top hitse value%identityAlignment
AT3G04900.1 Heavy metal transport/detoxification superfamily protein9.2e-0524.89Show/hide
Query:  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKI
        +L++NL+CC   P+RVK  L ++  V ++ ID  KGL+ +    T +P  +++A+++ G+  +L    Y      A   FR  + +   +   D      
Subjt:  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKI

Query:  DWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP--PYYWQQQP-----
                        + +   PPV            G  F        RGFG P   P      PA   ++PP  G   W  PP  P    ++P     
Subjt:  DWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP--PYYWQQQP-----

Query:  -PPAP-------AVAAAPGHYLFN---DENVDACKII
         PPAP        +   P   LFN   D+N   C I+
Subjt:  -PPAP-------AVAAAPGHYLFN---DENVDACKII

AT3G05220.1 Heavy metal transport/detoxification superfamily protein2.8e-0638.81Show/hide
Query:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL
        +T VL+VN+  C  C ++VK  L ++  V SV  D+++G VT+T N   DP  +V+ +S++GK A +
Subjt:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL

AT4G23882.1 Heavy metal transport/detoxification superfamily protein8.8e-0824.56Show/hide
Query:  APSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAAS
        +P  RT VLRV +KCC  C  + K  LL +  V +V  + ++GL+T+T +   +P T++  +++ GK A L             +   D+   ++P    
Subjt:  APSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAAS

Query:  DPHCNKIDWTQNCVPGSSKVHFNEAAG-------AVPPVDVP-YRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP
         P  N+    +      +K       G        + P+ +P +++R     G++ G      +     PM+ P PQ +P    P   P   ++    PP
Subjt:  DPHCNKIDWTQNCVPGSSKVHFNEAAG-------AVPPVDVP-YRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPP

Query:  PY----YWQQQPPPAPAVAAAPG---HY
        PY     +Q  PP +P     P    HY
Subjt:  PY----YWQQQPPPAPAVAAAPG---HY

AT5G37860.1 Heavy metal transport/detoxification superfamily protein7.8e-0435.82Show/hide
Query:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL
        +TY L+VN+  C  C  +VK  L ++  V SV ID  +  V +  N   DP  +V+ +++ GK A+L
Subjt:  RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGA
TGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAG
CACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAAC
AAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACT
TCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCA
TGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTC
AATGATGAGAATGTAGACGCGTGCAAGATCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGA
TGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAG
CACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAAC
AAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACT
TCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCA
TGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTC
AATGATGAGAATGTAGACGCGTGCAAGATCATTTAG
Protein sequenceShow/hide protein sequence
METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCN
KIDWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLF
NDENVDACKII