| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 5.8e-103 | 98.47 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGG PGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRP+PGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQ SSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 4.5e-95 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAP+PGS PQ SSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
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| XP_022959935.1 U1 small nuclear ribonucleoprotein C [Cucurbita moschata] | 1.4e-104 | 100 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| XP_023004664.1 U1 small nuclear ribonucleoprotein C [Cucurbita maxima] | 8.4e-102 | 97.96 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRP+PGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGST Q SSTNGAPLTAP TYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 9.9e-103 | 98.47 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVN+PSRPPPPAPIPGST Q SSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 2.2e-95 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAP+PGS PQ SSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
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| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 3.7e-95 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAPIPGS PQ SSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
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| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 3.7e-95 | 92.35 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAPIPGS PQ SSTNGAPL AP TYQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQP-SESN
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| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 6.7e-105 | 100 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 4.1e-102 | 97.96 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
IRPPVFPRP+PGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGST Q SSTNGAPLTAP TYQANPAAPGSGGYDSFTTMAQPSESNP
Subjt: IRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGGYDSFTTMAQPSESNP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XW44 U1 small nuclear ribonucleoprotein C | 3.4e-21 | 48.3 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ +A A ++ A + +G P PV P+M GG PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMPG
Query: IRPPVFPRP---LPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPP
+ P FP P PGAPG P P P +A P PG + RPP
Subjt: IRPPVFPRP---LPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPP
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| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 2.0e-50 | 57.73 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGGAP
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP G P
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGGAP
Query: --GLMPGIRPPVFPRP----LPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPI--------PGSTPQLSSTNGAPL----TAPQTYQANPAAP
LMPG+RPP+ P P PGAP +P P PP P PG + P PP P+ P P S GAP+ P YQANP AP
Subjt: --GLMPGIRPPVFPRP----LPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPI--------PGSTPQLSSTNGAPL----TAPQTYQANPAAP
Query: G---SGGYDSFTTMAQPSES
SG + T QP+ S
Subjt: G---SGGYDSFTTMAQPSES
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| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 6.5e-49 | 57.21 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGG--
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP G
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGG--
Query: -APG--LMPGIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQT---------------------
APG LMPG+RPP+ P PG PGY P PP M PGA PG + P PP P PG+ P APL P T
Subjt: -APG--LMPGIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGALMPGQVNVPSRPPPPAPIPGSTPQLSSTNGAPLTAPQT---------------------
Query: -YQANPAAPG---SGGYDSFTTMAQPSES
YQ NP AP SG + T QP+ S
Subjt: -YQANPAAPG---SGGYDSFTTMAQPSES
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| F6HQ26 U1 small nuclear ribonucleoprotein C | 1.5e-64 | 68.69 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL+ RPRLPVLPTP MP G
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GG
Query: AP-----GLMPGIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGA---LMPGQVNVPSRPP----PPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGG
AP L+PG+RPPV PRP+PGAPGY+P P MP MMAPPGA MP ++P RPP PPA +PGST +S + YQANPA P SGG
Subjt: AP-----GLMPGIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGA---LMPGQVNVPSRPP----PPAPIPGSTPQLSSTNGAPLTAPQTYQANPAAPGSGG
Query: YDSFTTMAQPSESN
+DSF AQ E+N
Subjt: YDSFTTMAQPSESN
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| Q56XE4 U1 small nuclear ribonucleoprotein C | 1.1e-48 | 59.05 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMP-
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+L RPR P++ +P PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGGAPGLMP-
Query: GIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGA-LMPGQVNVPSRPPPPAPIPGS-------TPQLSSTNGAP-----LTAPQTYQANPAAPGSGGYDSFT
G+RPPV PRP+ GY+P P +P MMAPPGA L P N RPP APIPG P G P L P Y NPAAP SG +++
Subjt: GIRPPVFPRPLPGAPGYLPNPTMPPMMAPPGA-LMPGQVNVPSRPPPPAPIPGS-------TPQLSSTNGAP-----LTAPQTYQANPAAPGSGGYDSFT
Query: TMAQPSESNP
P+ +NP
Subjt: TMAQPSESNP
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