; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G004390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G004390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionH15 domain-containing protein
Genome locationCmo_Chr08:2737543..2739432
RNA-Seq ExpressionCmoCh08G004390
SyntenyCmoCh08G004390
Gene Ontology termsGO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030202.1 hypothetical protein SDJN02_08549, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6197.64Show/hide
Query:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL
        VSVGRGRRKTVQLGA GGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGG+GDGVWAGAGGRATLKEYDEEMI EIYKSL
Subjt:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL

Query:  VVAQARLPPPESVRPSWVGGRLPAVAE
        VVAQARLPPPESVRPSWVGGRLPAVAE
Subjt:  VVAQARLPPPESVRPSWVGGRLPAVAE

XP_023004877.1 uncharacterized protein LOC111498056 [Cucurbita maxima]6.0e-5893.7Show/hide
Query:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL
        VSVGRGRRKTVQLGAPGGKRR+VWQFKV  KLRRLRRLPSLKKLLIWLRDSYMNAMLA ASSRVVG GGGTGDGVW GAGGRATLKEYDEEMI EIYKSL
Subjt:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL

Query:  VVAQARLPPPESVRPSWVGGRLPAVAE
        VVAQ RLPPPESVRPSWVGGRLPAVAE
Subjt:  VVAQARLPPPESVRPSWVGGRLPAVAE

XP_023514548.1 uncharacterized protein LOC111778805 [Cucurbita pepo subsp. pepo]2.6e-6196.06Show/hide
Query:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL
        V VGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLL+WLRDSYMNAMLAFASSRVVGCGGG+GDGVW GAGGRATLKEYDEEMI EIYKSL
Subjt:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL

Query:  VVAQARLPPPESVRPSWVGGRLPAVAE
        VVAQARLPPPESVRPSWVGGRLPAVAE
Subjt:  VVAQARLPPPESVRPSWVGGRLPAVAE

XP_038897064.1 uncharacterized protein LOC120085238 isoform X1 [Benincasa hispida]6.4e-4463.35Show/hide
Query:  ECVNLSIKGQSIIRNKGIAP--KDRDLNNVRVSVGRGRRKTVQLGAPGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--G
        + + +S++G S+    G+    + +    +  SVGR + +TVQLGA GG +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+  G
Subjt:  ECVNLSIKGQSIIRNKGIAP--KDRDLNNVRVSVGRGRRKTVQLGAPGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--G

Query:  CGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE
         GGG GDG+WAGA GR+TLKEYDE+MI EIYKSLVVAQ RLPPPESVRPSW GGRLP VAE
Subjt:  CGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE

XP_038897065.1 uncharacterized protein LOC120085238 isoform X2 [Benincasa hispida]5.4e-4375.97Show/hide
Query:  SVGRGRRKTVQLGAPGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYK
        SVGR + +TVQLGA GG +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+  G GGG GDG+WAGA GR+TLKEYDE+MI EIYK
Subjt:  SVGRGRRKTVQLGAPGG-KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVV--GCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYK

Query:  SLVVAQARLPPPESVRPSWVGGRLPAVAE
        SLVVAQ RLPPPESVRPSW GGRLP VAE
Subjt:  SLVVAQARLPPPESVRPSWVGGRLPAVAE

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z4 Uncharacterized protein1.4e-4168.12Show/hide
Query:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD
        +    +  SVGR R  T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G G+  GDG+W GA GR+TLKEYD
Subjt:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD

Query:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE
        E+MI EIYKSLVVAQ RLPPPE+VRPSW GGRLP VAE
Subjt:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A1S4DZ96 uncharacterized protein LOC1034927799.4e-4167.39Show/hide
Query:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD
        +    +  SVG  R +T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G G+  GDG+W GA GR+TLKEYD
Subjt:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD

Query:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE
        E+MI EIYKSLVVAQ RLPPPE VRPSW GGRLP VAE
Subjt:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A5A7TZB4 Uncharacterized protein2.5e-4168.12Show/hide
Query:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD
        +    +  SVGR R +T QLGA GG  +RR +W+ K+SPKLR  RR+PSLKKLL+WLRDSY+ AMLAFA+SRV+G G G+  GDG+W GA GR+TLKEYD
Subjt:  RDLNNVRVSVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGT--GDGVWAGAGGRATLKEYD

Query:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE
        E+MI EIYKSLVVAQ RLPPPE VRPSW GGRLP VAE
Subjt:  EEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE

A0A6J1JLB7 uncharacterized protein LOC1114879684.6e-4071.88Show/hide
Query:  SVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKS
        SVGRGR +T+QLGA GG  +RR +W+ K+SPKLR  RRLPSLKKLL+WLRDSY+ AMLAFA+SRV+G G   GDG+W G  GR+TLKEYDE+MI EIY S
Subjt:  SVGRGRRKTVQLGAPGG--KRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKS

Query:  LVVAQARLPPPESVRPSWVGGRLPAVAE
        LVVAQ RLPPPESVR   VGGRLP VAE
Subjt:  LVVAQARLPPPESVRPSWVGGRLPAVAE

A0A6J1KRL9 uncharacterized protein LOC1114980562.9e-5893.7Show/hide
Query:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL
        VSVGRGRRKTVQLGAPGGKRR+VWQFKV  KLRRLRRLPSLKKLLIWLRDSYMNAMLA ASSRVVG GGGTGDGVW GAGGRATLKEYDEEMI EIYKSL
Subjt:  VSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSL

Query:  VVAQARLPPPESVRPSWVGGRLPAVAE
        VVAQ RLPPPESVRPSWVGGRLPAVAE
Subjt:  VVAQARLPPPESVRPSWVGGRLPAVAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein4.6e-1646.08Show/hide
Query:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA
        GRR   ++     ++R  W+ K+ PKLR L++  S KKLL WLRD+Y+N ML  A+SRVVG   G G+    G G     KEYDE+ ++EIYKS+++AQ 
Subjt:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA

Query:  RL
         L
Subjt:  RL

AT3G62650.1 unknown protein3.5e-1644.55Show/hide
Query:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA
        GRRK  ++     +++  W+ K+ PKLR L +  S KK L+WLRDSY+  M+  A+SRVVG  G  G G      G   +KEYDE+M++EIYKS+++ QA
Subjt:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA

Query:  R
        +
Subjt:  R

AT3G62650.2 unknown protein3.5e-1644.55Show/hide
Query:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA
        GRRK  ++     +++  W+ K+ PKLR L +  S KK L+WLRDSY+  M+  A+SRVVG  G  G G      G   +KEYDE+M++EIYKS+++ QA
Subjt:  GRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDGVWAGAGGRATLKEYDEEMIMEIYKSLVVAQA

Query:  R
        +
Subjt:  R


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGTGCGTTAATCTTTCTATTAAAGGACAATCCATCATTCGAAACAAAGGAATAGCACCAAAGGATAGAGATTTGAACAATGTACGCGTTTCGGTGGGC
CGTGGGCGGCGGAAGACGGTGCAGCTTGGGGCACCCGGGGGGAAGCGACGGAATGTGTGGCAGTTCAAGGTCTCGCCGAAGCTCAGGCGACTCCGGCGGCTGCCG
TCGCTGAAGAAGCTGCTTATATGGTTGAGGGATTCTTATATGAATGCGATGCTGGCGTTTGCGAGCTCTAGGGTCGTTGGTTGCGGCGGCGGTACTGGCGATGGG
GTCTGGGCCGGCGCTGGCGGAAGGGCCACGTTGAAGGAGTATGATGAGGAAATGATCATGGAGATCTACAAGTCGTTGGTGGTGGCTCAGGCGCGGTTGCCTCCG
CCGGAATCTGTCCGGCCGAGTTGGGTCGGCGGCCGGTTGCCTGCTGTGGCGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAGTGCGTTAATCTTTCTATTAAAGGACAATCCATCATTCGAAACAAAGGAATAGCACCAAAGGATAGAGATTTGAACAATGTACGCGTTTCGGTGGGC
CGTGGGCGGCGGAAGACGGTGCAGCTTGGGGCACCCGGGGGGAAGCGACGGAATGTGTGGCAGTTCAAGGTCTCGCCGAAGCTCAGGCGACTCCGGCGGCTGCCG
TCGCTGAAGAAGCTGCTTATATGGTTGAGGGATTCTTATATGAATGCGATGCTGGCGTTTGCGAGCTCTAGGGTCGTTGGTTGCGGCGGCGGTACTGGCGATGGG
GTCTGGGCCGGCGCTGGCGGAAGGGCCACGTTGAAGGAGTATGATGAGGAAATGATCATGGAGATCTACAAGTCGTTGGTGGTGGCTCAGGCGCGGTTGCCTCCG
CCGGAATCTGTCCGGCCGAGTTGGGTCGGCGGCCGGTTGCCTGCTGTGGCGGAATAA
Protein sequenceShow/hide protein sequence
MFECVNLSIKGQSIIRNKGIAPKDRDLNNVRVSVGRGRRKTVQLGAPGGKRRNVWQFKVSPKLRRLRRLPSLKKLLIWLRDSYMNAMLAFASSRVVGCGGGTGDG
VWAGAGGRATLKEYDEEMIMEIYKSLVVAQARLPPPESVRPSWVGGRLPAVAE