CuGenDBv2

Gene ID	CmoCh08G004540
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Translation initiation factor IF-2
Genome location	Cmo_Chr08:2814009..2814497
RNA-Seq Expression	CmoCh08G004540
Synteny	CmoCh08G004540
Gene Ontology terms	GO:0006468 - protein phosphorylation (biological process) GO:0006810 - transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0004674 - protein serine/threonine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593234.1 hypothetical protein SDJN03_12710, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-82

98.77

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLPAAAAEEGKKEDIGSG SGSDQLSCGRGNYKRWNPNLESISEDFCHSFRE+H
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

XP_022960525.1 uncharacterized protein LOC111461238 [Cucurbita moschata]

3.2e-83

100

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

XP_023004874.1 uncharacterized protein LOC111498053 [Cucurbita maxima]

4.7e-82

98.15

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQ+AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLPAAAAEEGK+EDIGSGI+GSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

XP_023514542.1 uncharacterized protein LOC111778799 [Cucurbita pepo subsp. pepo]

1.7e-79

98.15

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLP AAAEEGKKEDIGSGISGSDQLSCGRGN KRWNPNLESISEDFCHSFRE H
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

XP_038899061.1 uncharacterized protein LOC120086461 [Benincasa hispida]

2.9e-60

80.25

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSL ST  AKLLD DGGLI KVRLPVKAAELMLERPG VIS VDVLRRTRRISALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN ELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        + KK GSKV PAAA      E+      GSDQLSC RGNYKRWNPNLESISEDF  SFREKH
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K830 Uncharacterized protein

1.0e-58

75.15

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFS  ST  AKLLD DGGLI K +LPVKAAELMLE PG+VIS VDVLRRTRRISALKADDEL+GGKIYV+VA+GRIGSKVS+ ELEN +L CKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        + KK GSKV PA   AA    ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Subjt:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

A0A1S3BSD7 uncharacterized protein LOC103492762

2.1e-59

76.36

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFS  ST  AKLLD DGGLI KV+LPVKAAELMLE PG+VIS VDVLRRTRRISALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN +L CKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        + KK GSKV PA   AA    ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Subjt:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

A0A5D3D319 DUF4228 domain-containing protein

9.2e-60

76.36

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFS  ST  AKLLD DGGLI KV+LPVKAAELMLE PG+VIS VDVLRRTRRISALKADDELVGGKIYV+VA+GRIGSKVS+ ELEN +L CKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        + KK GSKV PA   AA    ++E+IG G+ GSDQL+C RGNYKRWNPNLESI EDF  SFREKH
Subjt:  KGKKIGSKVLPA---AAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

A0A6J1H9B3 uncharacterized protein LOC111461238

1.6e-83

100

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

A0A6J1KXJ6 uncharacterized protein LOC111498053

2.3e-82

98.15

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Query:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
        MGCFSACFSLNSTQ+AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN
Subjt:  MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKN

Query:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
        KGKKIGSKVLPAAAAEEGK+EDIGSGI+GSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH
Subjt:  KGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G03280.1 unknown protein

8.1e-08

29.09

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Query:  MGCFSACFSLNSTQA---AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDEL-VGG-KIYVLVALGRIGSKVSVVELENLE
        MG + +C +LN T +   AK++  DGG +  + +P KAAELM+E P Y +     ++  R+   L ADD+L +GG  +YV   + R  S  +  ++  L 
Subjt:  MGCFSACFSLNSTQA---AKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDEL-VGG-KIYVLVALGRIGSKVSVVELENLE

Query:  LGCKNKGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNY-------KRWNPNLESISED
        L  K + K  G + +     +      IG  ++  D        +       K   P LE+I+ED
Subjt:  LGCKNKGKKIGSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNY-------KRWNPNLESISED

AT5G17350.1 unknown protein

6.9e-07

29.93

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Query:  SLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDEL--VGGKIYVLVALGRIGSKVSVVELENLELGCKNKGK-KI
        S +S+ AAK++  DGG +  +  P+KAAELM+E P + +     L+  R+   L ADD+L   G  +YV   + R  S  +  +L  L +  K + + ++
Subjt:  SLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDEL--VGGKIYVLVALGRIGSKVSVVELENLELGCKNKGK-KI

Query:  GSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISE
        GS    AA         +     G D      G+      NLE I E
Subjt:  GSKVLPAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISE

Sequences

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CDS sequence

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ATGGGGTGTTTTTCTGCTTGTTTCTCTTTGAATTCTACTCAAGCAGCTAAGCTTCTAGACAGTGATGGAGGTCTGATCGAAAAGGTTAGGCTTCCGGTGAAAGCGGCGGA
GCTGATGCTGGAGAGGCCTGGCTATGTCATCTCTTCGGTTGACGTGCTCCGGCGGACTCGCCGGATTTCGGCCTTGAAAGCCGATGATGAGCTTGTGGGTGGTAAAATAT
ATGTGCTGGTGGCTTTAGGGAGAATTGGGTCCAAAGTTTCAGTGGTGGAATTGGAGAATTTGGAGTTGGGCTGCAAGAATAAAGGGAAGAAGATTGGCTCGAAGGTGCTG
CCCGCGGCGGCGGCGGAGGAAGGAAAGAAAGAGGATATCGGAAGTGGAATTAGTGGTTCTGATCAATTGAGTTGTGGTCGTGGGAATTATAAGCGATGGAATCCCAATTT
GGAATCGATTTCTGAGGACTTTTGCCATTCTTTTAGAGAGAAACATTAG

mRNA sequence

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Protein sequence

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MGCFSACFSLNSTQAAKLLDSDGGLIEKVRLPVKAAELMLERPGYVISSVDVLRRTRRISALKADDELVGGKIYVLVALGRIGSKVSVVELENLELGCKNKGKKIGSKVL
PAAAAEEGKKEDIGSGISGSDQLSCGRGNYKRWNPNLESISEDFCHSFREKH

CmoCh08G004540 (gene) of Cucurbita moschata (Rifu) v1 genome