CuGenDBv2

Gene ID	CmoCh08G004640
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	EB_dh domain-containing protein
Genome location	Cmo_Chr08:2870477..2872767
RNA-Seq Expression	CmoCh08G004640
Synteny	CmoCh08G004640
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593247.1 hypothetical protein SDJN03_12723, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-55

100

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

XP_022153329.1 uncharacterized protein LOC111020848 [Momordica charantia]

9.8e-44

83.33

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR
        QDAQF IGG+SKMSAAFWYPVDG+PWH SGHYSI+CDWT +D  SS+SKL S S G  SGSSAS+FALLISVISLCLS++VVYRLFRPPQNVAVEYRVLR
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR

Query:  PQNVGLTSMDNNNL
        PQNV LTSMDNNNL
Subjt:  PQNVGLTSMDNNNL

XP_022959651.1 uncharacterized protein LOC111460667 [Cucurbita moschata]

2.5e-55

100

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

XP_023004576.1 uncharacterized protein LOC111497835 [Cucurbita maxima]

5.6e-55

99.12

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTP+DITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

XP_023514964.1 uncharacterized protein LOC111779122 [Cucurbita pepo subsp. pepo]

1.6e-54

99.12

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDG PWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BQY5 uncharacterized protein LOC103492748

1.8e-43

85.84

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR
        QDAQFVIGG+SKMSAAFWYPVDG+PWH SGHYSIHCDWT +D  SS+SKLTS S G GSGS+ASIFALLISVISLCLSVVVVYRLFR PQ+VAVEY VLR
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR

Query:  PQNVGLTSMDNNN
        PQNV LTSMDNNN
Subjt:  PQNVGLTSMDNNN

A0A5D3D3X2 Heme binding

1.8e-43

85.84

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR
        QDAQFVIGG+SKMSAAFWYPVDG+PWH SGHYSIHCDWT +D  SS+SKLTS S G GSGS+ASIFALLISVISLCLSVVVVYRLFR PQ+VAVEY VLR
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR

Query:  PQNVGLTSMDNNN
        PQNV LTSMDNNN
Subjt:  PQNVGLTSMDNNN

A0A6J1DIR6 uncharacterized protein LOC111020848

4.8e-44

83.33

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR
        QDAQF IGG+SKMSAAFWYPVDG+PWH SGHYSI+CDWT +D  SS+SKL S S G  SGSSAS+FALLISVISLCLS++VVYRLFRPPQNVAVEYRVLR
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLS-GVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR

Query:  PQNVGLTSMDNNNL
        PQNV LTSMDNNNL
Subjt:  PQNVGLTSMDNNNL

A0A6J1H5G1 uncharacterized protein LOC111460667

1.2e-55

100

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

A0A6J1KSH0 uncharacterized protein LOC111497835

2.7e-55

99.12

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
        QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTP+DITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLRP

Query:  QNVGLTSMDNNNL
        QNVGLTSMDNNNL
Subjt:  QNVGLTSMDNNNL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G62370.1 heme binding

3.2e-24

51.79

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Query:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITS-STSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR
        QD QF +G  +KMS AFWYPVD +PWH SGHY+I+CDWTP+DI+S S+S LT+ +  GS   ASI A+L+S+ISL  S  + YRLF              
Subjt:  QDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITS-STSKLTSLSGVGSGSSASIFALLISVISLCLSVVVVYRLFRPPQNVAVEYRVLR

Query:  PQNVGLTSMDNN
        P+NV  T M+NN
Subjt:  PQNVGLTSMDNN

Sequences

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CDS sequence

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mRNA sequence

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ATGACCATCTTCCAATTTCAGCAAATGATTCGAGTGCCAAGAACGACTGGAAAGGCACATGGTGGCACAGCAGCTTTACCCATCATTCAGGATGCTCAATTCGTCATTGG
TGGAACAAGCAAAATGTCAGCTGCATTTTGGTATCCAGTCGACGGGCAGCCATGGCATGCATCAGGACACTACTCCATTCACTGTGATTGGACACCCATGGATATCACTT
CCAGTACTTCAAAATTAACCTCATTATCAGGGGTTGGCTCAGGAAGCTCTGCAAGCATTTTTGCTCTCTTGATCTCAGTAATCTCTTTGTGCCTCTCTGTTGTTGTTGTG
TACAGACTCTTTAGACCTCCTCAGAATGTGGCTGTCGAGTACAGAGTTCTTAGACCTCAGAACGTGGGCCTTACTTCCATGGACAACAACAATCTTTAGAGTAAGTGCTT
TTGGATTGTACGATTGATCAACATTTTGTGTACTTCACAGATTATATGTACTTCCAAAGCTTTTCAGTTTTTGTAGTTCCTTATGGGCTAACAATTTTTTTACTACAAGG
TTTCCATTCTTAGTTTATTATAAAGATGTCCATTTTGAGTTGAGTTGGATTAGATAGCGAAAGAAACACAGTGTATGGATTTGTTCGTGTAAACTATATGGTTTATTATT
AAAAAATAAAAATAAAATAAAAAAAATAATGGAATTACATG

Protein sequence

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MTIFQFQQMIRVPRTTGKAHGGTAALPIIQDAQFVIGGTSKMSAAFWYPVDGQPWHASGHYSIHCDWTPMDITSSTSKLTSLSGVGSGSSASIFALLISVISLCLSVVVV
YRLFRPPQNVAVEYRVLRPQNVGLTSMDNNNL

CmoCh08G004640 (gene) of Cucurbita moschata (Rifu) v1 genome