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CmoCh08G004660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G004660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP synthase subunit beta, chloroplastic
Genome locationCmo_Chr08:2876684..2876916
RNA-Seq ExpressionCmoCh08G004660
SyntenyCmoCh08G004660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THU43597.1 hypothetical protein C4D60_Mb00t18150 [Musa balbisiana]5.9e-0550Show/hide
Query:  PRIVGEEHYETAQRVNLTTTLKLSLGWTNYPKR---RSTSTQNGAFLITSFFRSGSLYGFPEKYVGLAET
        PRIVGEEHYE   R  L+    L LGWTNYPK+    + + +   FL   FF +    G P KYVGLAET
Subjt:  PRIVGEEHYETAQRVNLTTTLKLSLGWTNYPKR---RSTSTQNGAFLITSFFRSGSLYGFPEKYVGLAET

TrEMBL top hitse value%identityAlignment
A0A2P1GBL7 ATP synthase subunit beta, chloroplastic7.0e-0448.05Show/hide
Query:  MLQPRIVGEEHYETAQRVNLT----TTLKLSLGWTNYPKRRST---STQNGAFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T      L+  +      +R ST   + +   FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLT----TTLKLSLGWTNYPKRRST---STQNGAFLITSFFRSGSLYGFPEKYVGLAET

A0A4S8I6Q9 H(+)-transporting two-sector ATPase2.8e-0550Show/hide
Query:  PRIVGEEHYETAQRVNLTTTLKLSLGWTNYPKR---RSTSTQNGAFLITSFFRSGSLYGFPEKYVGLAET
        PRIVGEEHYE   R  L+    L LGWTNYPK+    + + +   FL   FF +    G P KYVGLAET
Subjt:  PRIVGEEHYETAQRVNLTTTLKLSLGWTNYPKR---RSTSTQNGAFLITSFFRSGSLYGFPEKYVGLAET

A7X7I5 ATP synthase subunit beta (Fragment)7.0e-0444.44Show/hide
Query:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T         +   LG     +    +         FL   FF +    GFP KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

O98413 ATP synthase subunit beta (Fragment)7.0e-0444.44Show/hide
Query:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T         +   LG     +    +         FL   FF +    GFP KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

Q5J047 ATP synthase subunit beta (Fragment)5.4e-0444.44Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRR----STSTQNGAFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV LT+        +   LG     +      + + +N  FL   FF +    G P KYVGLA T
Subjt:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRR----STSTQNGAFLITSFFRSGSLYGFPEKYVGLAET

SwissProt top hitse value%identityAlignment
A6MMC9 ATP synthase subunit beta, chloroplastic5.5e-0645.68Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT---------TLKLSLGWTNYPKRRSTSTQN--GAFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T+            L L   +   R + S       FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLTT---------TLKLSLGWTNYPKRRSTSTQN--GAFLITSFFRSGSLYGFPEKYVGLAET

O98766 ATP synthase subunit beta, chloroplastic9.4e-0643.21Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T+        +   LG     +    +         FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

Q7HDI4 ATP synthase subunit beta, chloroplastic9.4e-0643.21Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T+        +   LG     +    +         FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

Q7HHX1 ATP synthase subunit beta, chloroplastic9.4e-0643.21Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T+        +   LG     +    +         FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

Q9MRV8 ATP synthase subunit beta, chloroplastic9.4e-0643.21Show/hide
Query:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQRV  T+        +   LG     +    +         FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLTT-------TLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET

Arabidopsis top hitse value%identityAlignment
ATCG00480.1 ATP synthase subunit beta3.3e-0641.98Show/hide
Query:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET
        MLQPRIVGEEHYETAQ+V  T         +   LG     +    +         FL   FF +    G P KYVGLAET
Subjt:  MLQPRIVGEEHYETAQRVNLT-------TTLKLSLGWTNYPKRRSTSTQNG----AFLITSFFRSGSLYGFPEKYVGLAET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTGAACCTTACAACGACATTAAAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGCG
CAGCACGAGCACGCAAAATGGAGCGTTTCTTATCACATCCTTTTTTCGTAGCGGAAGTCTTTATGGGTTCCCCGAGAAATACGTTGGCCTAGCAGAAACAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTGAACCTTACAACGACATTAAAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGCG
CAGCACGAGCACGCAAAATGGAGCGTTTCTTATCACATCCTTTTTTCGTAGCGGAAGTCTTTATGGGTTCCCCGAGAAATACGTTGGCCTAGCAGAAACAAATTAG
Protein sequenceShow/hide protein sequence
MLQPRIVGEEHYETAQRVNLTTTLKLSLGWTNYPKRRSTSTQNGAFLITSFFRSGSLYGFPEKYVGLAETN