; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G004820 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G004820
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NIM1-INTERACTING 1
Genome locationCmo_Chr08:2979922..2980317
RNA-Seq ExpressionCmoCh08G004820
SyntenyCmoCh08G004820
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593261.1 hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5595.42Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
        MEKQSLKTTGKRVAS    AAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC+GEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
Subjt:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA

Query:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        KEEAAAAAI TAKKKKKVKNEEDILDLNLSL
Subjt:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL

KAG7025612.1 hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5494.74Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDG--EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
        MEKQSLKTTGKRVAS    AAVDG  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGC+GEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
Subjt:  MEKQSLKTTGKRVASAAAAAAVDG--EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG

Query:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_022960173.1 protein NIM1-INTERACTING 1 [Cucurbita moschata]5.3e-60100Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
        MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
Subjt:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA

Query:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        KEEAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_023004697.1 protein NIM1-INTERACTING 1 [Cucurbita maxima]8.8e-4787.22Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDGEE--EEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
        MEKQSLKTTGKRV    AAA VD EE  EEEMKMEAFF LVRNFKEMRDQRRKELMI CDGEKAAAAEMRK+KMKTVENRSAWIPRFEREDFDEEFQVRG
Subjt:  MEKQSLKTTGKRVASAAAAAAVDGEE--EEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG

Query:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        PAKEEAAAA      KKKKVKNEEDILDLNLSL
Subjt:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

XP_023514605.1 protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]5.0e-5090.91Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDG-EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP
        MEKQSLK TGKRV    A AAVDG EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQ+RGP
Subjt:  MEKQSLKTTGKRVASAAAAAAVDG-EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP

Query:  AKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        AKEEAAAA    AKKKKKVKNEEDILDLNLSL
Subjt:  AKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein7.8e-1753.12Show/hide
Query:  AVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCD--GEKAAAAEMRKRKMKT---VENRSAWIPRFEREDFDEEFQVRGP---------AKEEAAA
        A D  E+EE  ME FFALVR+ KEMRDQRRKEL IG +   E+ AA E R+++M+    VENRS WIP+FEREDFDEEFQ              K +  A
Subjt:  AVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCD--GEKAAAAEMRKRKMKT---VENRSAWIPRFEREDFDEEFQVRGP---------AKEEAAA

Query:  AAIATA---KKKKKVKNEEDILDLNLSL
        A+  T    K KKKVKN +  LDLNL+L
Subjt:  AAIATA---KKKKKVKNEEDILDLNLSL

A0A6J1DAZ5 protein NIM1-INTERACTING 11.7e-1957.5Show/hide
Query:  EEEEEMKMEAFFALVRNFKEMRDQRRKEL--MIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP----------AKEEAAAAAI-AT
        EEEEEMKMEAFFAL+RNFKEMRD+RRKEL  MIG  GE     E +++KMKT    S WIP F REDFDE+FQVRGP           KE+     + A 
Subjt:  EEEEEMKMEAFFALVRNFKEMRDQRRKEL--MIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGP----------AKEEAAAAAI-AT

Query:  AKKKKKVKNEEDILDLNLSL
          KKK +KN+E+ LDLNL+L
Subjt:  AKKKKKVKNEEDILDLNLSL

A0A6J1H831 protein NIM1-INTERACTING 12.6e-60100Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
        MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA
Subjt:  MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPA

Query:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        KEEAAAAAIATAKKKKKVKNEEDILDLNLSL
Subjt:  KEEAAAAAIATAKKKKKVKNEEDILDLNLSL

A0A6J1JVD5 uncharacterized protein LOC1114881892.1e-1754.24Show/hide
Query:  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKR--KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE---------EAAAAAIATAK
        EEEEE++ME F+ALVRNFKE+RD+ RKE++ G +G++ AA + RKR    +TV+N+S+WI RFEREDFDE+ QV G A E         E    A A  K
Subjt:  EEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKR--KMKTVENRSAWIPRFEREDFDEEFQVRGPAKE---------EAAAAAIATAK

Query:  KKKKVKNEEDILDLNLSL
        K+KKV +  D LDLNLSL
Subjt:  KKKKVKNEEDILDLNLSL

A0A6J1KR57 protein NIM1-INTERACTING 14.2e-4787.22Show/hide
Query:  MEKQSLKTTGKRVASAAAAAAVDGEE--EEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG
        MEKQSLKTTGKRV    AAA VD EE  EEEMKMEAFF LVRNFKEMRDQRRKELMI CDGEKAAAAEMRK+KMKTVENRSAWIPRFEREDFDEEFQVRG
Subjt:  MEKQSLKTTGKRVASAAAAAAVDGEE--EEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRG

Query:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL
        PAKEEAAAA      KKKKVKNEEDILDLNLSL
Subjt:  PAKEEAAAAAIATAKKKKKVKNEEDILDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 14.4e-0429.82Show/hide
Query:  DGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDE-EFQVRGP----AKEEAAAAAIATAKKKKK
        D EEEEE K++ FF L+++++E R +RR+EL        A  + + +RK    E     +P F+ EDF +    ++ P    +  +     +   + + +
Subjt:  DGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDE-EFQVRGP----AKEEAAAAAIATAKKKKK

Query:  VKNEEDILDLNLSL
         +NE+  LDLNL+L
Subjt:  VKNEEDILDLNLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCAGAGCTTGAAGACGACGGGGAAGAGAGTGGCTTCCGCCGCCGCCGCCGCCGCCGTCGACGGAGAGGAGGAGGAGGAGATGAAGATGGAGGCGTTCTTTGC
TCTGGTGAGGAATTTCAAGGAAATGCGAGATCAGCGGAGGAAGGAGTTGATGATCGGCTGCGACGGCGAGAAAGCGGCAGCGGCGGAGATGAGGAAGAGGAAGATGAAGA
CGGTGGAGAATCGGTCGGCGTGGATTCCGAGGTTTGAAAGAGAGGATTTCGATGAGGAGTTTCAGGTGAGAGGTCCGGCGAAGGAAGAGGCGGCGGCGGCGGCGATCGCG
ACGGCGAAGAAGAAGAAGAAAGTAAAGAACGAAGAGGATATTTTGGATCTTAATCTGTCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGCAGAGCTTGAAGACGACGGGGAAGAGAGTGGCTTCCGCCGCCGCCGCCGCCGCCGTCGACGGAGAGGAGGAGGAGGAGATGAAGATGGAGGCGTTCTTTGC
TCTGGTGAGGAATTTCAAGGAAATGCGAGATCAGCGGAGGAAGGAGTTGATGATCGGCTGCGACGGCGAGAAAGCGGCAGCGGCGGAGATGAGGAAGAGGAAGATGAAGA
CGGTGGAGAATCGGTCGGCGTGGATTCCGAGGTTTGAAAGAGAGGATTTCGATGAGGAGTTTCAGGTGAGAGGTCCGGCGAAGGAAGAGGCGGCGGCGGCGGCGATCGCG
ACGGCGAAGAAGAAGAAGAAAGTAAAGAACGAAGAGGATATTTTGGATCTTAATCTGTCTCTGTAG
Protein sequenceShow/hide protein sequence
MEKQSLKTTGKRVASAAAAAAVDGEEEEEMKMEAFFALVRNFKEMRDQRRKELMIGCDGEKAAAAEMRKRKMKTVENRSAWIPRFEREDFDEEFQVRGPAKEEAAAAAIA
TAKKKKKVKNEEDILDLNLSL