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CmoCh08G005060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G005060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:3154637..3154984
RNA-Seq ExpressionCmoCh08G005060
SyntenyCmoCh08G005060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058604.1 hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa]1.7e-2257.39Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G   GD +S+QIVRCD  AE  AA    V                   
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
            VESNEFILYSV
Subjt:  LGGGVESNEFILYSV

KAG6593287.1 hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sororia]8.5e-5496.52Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDG RGGDVSSNQIVRCDAEAEAEAAVAAAVLG DVSSHQVIRCGAEAAV
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
        +GGGV SNEFILYSV
Subjt:  LGGGVESNEFILYSV

KAG7025639.1 hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-5598.26Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLG DVSSHQVIRCGAEAAV
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
        +GGGVESNEFILYSV
Subjt:  LGGGVESNEFILYSV

KGN45108.1 hypothetical protein Csa_015813 [Cucumis sativus]1.6e-2359.13Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G   GD +S+QIV C AE  A AA                     AAV
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
        L   VESNEFILYSV
Subjt:  LGGGVESNEFILYSV

TYK10407.1 hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa]8.6e-2257.26Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARG--GDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEA
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G  G  GD +S+QIVRCD  AE  AA    V                 
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARG--GDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEA

Query:  AVLGGGVESNEFILYSV
              VESNEFILYSV
Subjt:  AVLGGGVESNEFILYSV

TrEMBL top hitse value%identityAlignment
A0A0A0K6I8 Uncharacterized protein7.6e-2459.13Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G   GD +S+QIV C AE  A AA                     AAV
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
        L   VESNEFILYSV
Subjt:  LGGGVESNEFILYSV

A0A5A7UTW3 Uncharacterized protein8.4e-2357.39Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G   GD +S+QIVRCD  AE  AA    V                   
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
            VESNEFILYSV
Subjt:  LGGGVESNEFILYSV

A0A5D3CEL3 Uncharacterized protein4.2e-2257.26Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARG--GDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEA
        MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G  G  GD +S+QIVRCD  AE  AA    V                 
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARG--GDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEA

Query:  AVLGGGVESNEFILYSV
              VESNEFILYSV
Subjt:  AVLGGGVESNEFILYSV

A0A6J1JW88 uncharacterized protein LOC1114884413.6e-1866.67Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVA
        MG+F+++LDA VRIVARFHSHCPQT RMYYHPPANS++GHHSD Q E RL      GDVSS+QIV C A A   A  A
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVA

W9R4I1 Uncharacterized protein9.0e-1746.09Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV
        MG+F+++LD  VRIVARFHSHCPQT RMYYHPPAN+D+ HH++N      GDG   GDV                              +V++CG +A  
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAV

Query:  LGGGVESNEFILYSV
        +GGG E+ EFILYSV
Subjt:  LGGGVESNEFILYSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57450.1 unknown protein1.7e-1250.77Show/hide
Query:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIV
        MG++ ++LD  VRI ARFHSHCPQT R+YYHPP  SD+ HH    ++L  G G  G   +S  +V
Subjt:  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTTCATCGATGTTCTTGACGCTAGCGTCAGGATTGTTGCCAGATTTCATTCGCATTGTCCTCAAACTGGCCGGATGTACTACCATCCGCCGGCTAACTCCGA
CGATGGCCATCATTCTGACAACCAGGAGGAGCTTCGCCTCGGGGACGGCGCTCGCGGCGGTGATGTGTCGTCTAATCAGATCGTTCGTTGTGATGCTGAGGCTGAGGCCG
AGGCCGCGGTCGCGGCCGCCGTTCTCGGCTGCGATGTGTCGTCTCATCAGGTTATTCGTTGTGGTGCCGAGGCCGCCGTTCTCGGCGGCGGCGTTGAGAGTAATGAGTTT
ATTCTTTACTCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGTTCATCGATGTTCTTGACGCTAGCGTCAGGATTGTTGCCAGATTTCATTCGCATTGTCCTCAAACTGGCCGGATGTACTACCATCCGCCGGCTAACTCCGA
CGATGGCCATCATTCTGACAACCAGGAGGAGCTTCGCCTCGGGGACGGCGCTCGCGGCGGTGATGTGTCGTCTAATCAGATCGTTCGTTGTGATGCTGAGGCTGAGGCCG
AGGCCGCGGTCGCGGCCGCCGTTCTCGGCTGCGATGTGTCGTCTCATCAGGTTATTCGTTGTGGTGCCGAGGCCGCCGTTCTCGGCGGCGGCGTTGAGAGTAATGAGTTT
ATTCTTTACTCTGTCTGA
Protein sequenceShow/hide protein sequence
MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVSSNQIVRCDAEAEAEAAVAAAVLGCDVSSHQVIRCGAEAAVLGGGVESNEF
ILYSV