; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G005170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G005170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationCmo_Chr08:3225088..3238261
RNA-Seq ExpressionCmoCh08G005170
SyntenyCmoCh08G005170
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site
IPR019129 - Folate-sensitive fragile site protein Fra10Ac1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593299.1 Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia]3.8e-18981.99Show/hide
Query:  GTNRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVR-----------------------------------------------
        GT RSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVR                                               
Subjt:  GTNRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVR-----------------------------------------------

Query:  --AKAFLGFDRLFHITVNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLK
          AKA LGFDRLFHITVNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLK
Subjt:  --AKAFLGFDRLFHITVNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLK

Query:  YIPFSTSPSVGERLDPNSQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
        YIPFSTSP VGERLDPNSQMELVGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
Subjt:  YIPFSTSPSVGERLDPNSQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNG
        I+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNG
Subjt:  IRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNG

Query:  GKSNGLGLSTYNSKLADESMQVNAAPQRAIPIK
        GKSNG GLSTYNSKLADESMQVNAAPQRAIPIK
Subjt:  GKSNGLGLSTYNSKLADESMQVNAAPQRAIPIK

KAG7025650.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-15691.46Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
        NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN

Query:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
        SQMELVGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAM
Subjt:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
        RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLAD
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD

Query:  ESMQVNAAPQRAIPIK
        ESMQVNAAPQRAIPIK
Subjt:  ESMQVNAAPQRAIPIK

XP_022960498.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]3.5e-15892.41Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
        NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN

Query:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
        SQMELVGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
Subjt:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
        RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD

Query:  ESMQVNAAPQRAIPIK
        ESMQVNAAPQRAIPIK
Subjt:  ESMQVNAAPQRAIPIK

XP_022960500.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata]6.1e-15592.28Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
        MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL

Query:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG
        VGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG
Subjt:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV

Query:  NAAPQRAIPIK
        NAAPQRAIPIK
Subjt:  NAAPQRAIPIK

XP_023515220.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp. pepo]2.0e-15389.87Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
        NKFQTMPSKPGIVEQE ADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTG+EVQHLKYIPFSTSP VGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN

Query:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
        SQMELVGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAM
Subjt:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
        RRARGSGGRFLNTKKPNSVISNKTMEEDINS INHVSEPVSEG SNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLAD
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD

Query:  ESMQVNAAPQRAIPIK
        ES+QVNAAPQRAIPIK
Subjt:  ESMQVNAAPQRAIPIK

TrEMBL top hitse value%identityAlignment
A0A6J1H7S4 Nuclear transcription factor Y subunit3.0e-15592.28Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
        MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL

Query:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG
        VGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG
Subjt:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV

Query:  NAAPQRAIPIK
        NAAPQRAIPIK
Subjt:  NAAPQRAIPIK

A0A6J1HB71 Nuclear transcription factor Y subunit1.7e-15892.41Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
        NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN

Query:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
        SQMELVGHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
Subjt:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
        RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD

Query:  ESMQVNAAPQRAIPIK
        ESMQVNAAPQRAIPIK
Subjt:  ESMQVNAAPQRAIPIK

A0A6J1JU93 Nuclear transcription factor Y subunit5.8e-11976.69Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
        MPSKP  V+Q+  DG+KYL+QSTKYSE WWHGVGNNTI  E+ATKT+S +YLN TV+S    SQANDEN GKEVQHLKYIPFSTSP VGERLD NSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL

Query:  VGHSILPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDI
        VGHSI PH YGLHHARMPLPLEME EPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPN+VISN   E+ I
Subjt:  VGHSILPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDI

Query:  NSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD----------ESMQVNAAPQRAIPI
        N G NH ++PV+E GS YMVA+ENG+KDTL++   EDKEFM QN+QIT AFFN GK NG G+STY S+LAD          ESMQVN APQRAIPI
Subjt:  NSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD----------ESMQVNAAPQRAIPI

A0A6J1KWS3 Nuclear transcription factor Y subunit8.9e-13689.05Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMEL

Query:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG
        +GHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG

A0A6J1L019 Nuclear transcription factor Y subunit5.1e-13989.24Show/hide
Query:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN
        NKFQTMPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPN
Subjt:  NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPN

Query:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM
        SQMEL+GHSI                        LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAM
Subjt:  SQMELVGHSI------------------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAM

Query:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG
        RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  RRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG

SwissProt top hitse value%identityAlignment
Q5FVF1 Protein FRA10AC1 homolog3.3e-3447.31Show/hide
Query:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL
        ++ F+ +EED+ D +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWR+EKEV+SGKGQF CGNK CDEK+GL S+EVNF Y E GE + ALVKL
Subjt:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL

Query:  VTCERCSKKL--HYKRNKEKEKLERMEQEMSKRKRP--------SDDSSDSEDAGSRTRRRKGTNRS
          C+ CS KL  H++R + K   +R + +    + P        S+++S  +D G  + +R   +R+
Subjt:  VTCERCSKKL--HYKRNKEKEKLERMEQEMSKRKRP--------SDDSSDSEDAGSRTRRRKGTNRS

Q70Z53 Protein FRA10AC12.9e-3549.07Show/hide
Query:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL
        ++ F+ +EED+MD +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWRVEKEV+SGKGQF CGNK+CD+K+GL S+EVNF Y E GE + ALVKL
Subjt:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL

Query:  VTCERCSKKLHY-------KRNKEKEKLERMEQEMSKRK---RPSDDSSDSEDAGSRTRRR
          C+ CS KL++       K  K K+K ++  +E S +K     ++++S  +D G  + ++
Subjt:  VTCERCSKKLHY-------KRNKEKEKLERMEQEMSKRK---RPSDDSSDSEDAGSRTRRR

Q8BP78 Protein FRA10AC1 homolog9.5e-3447.31Show/hide
Query:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL
        ++ F+ +EED+ D +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWR+EKEV+SGKGQF CGNK C+EK+GL S+EVNF Y E GE + ALVKL
Subjt:  SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKL

Query:  VTCERCSKKLHY-------KRNKEKEKLERMEQEMSKRKR---PSDDSSDSEDAGSRTRRRKGTNRS
          C+ CS KL++       K  K+K K      E  ++K    PS+++S  +D G  + ++   +R+
Subjt:  VTCERCSKKLHY-------KRNKEKEKLERMEQEMSKRKR---PSDDSSDSEDAGSRTRRRKGTNRS

Q945M9 Nuclear transcription factor Y subunit A-94.3e-2662.62Show/hide
Query:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP
        G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+I+SRKPYLHESRH HAMRR RG+GGRF   KK N+  S +  EE  N    HV++ 
Subjt:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP

Query:  VSEGGSN
         S   S+
Subjt:  VSEGGSN

Q9LXV5 Nuclear transcription factor Y subunit A-18.0e-2537.89Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW--------------------------HGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKE-
        M SKPG   +E  +    + Q   Y+EPWW                          +G  +N +         + E       S A  S  + +N G E 
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW--------------------------HGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKE-

Query:  ------VQHLKYIPFSTSPS-VGERL--------DP--NSQMELVGHSILPH--FYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
              ++++   P    P  VG  +        DP     M   GH  L    + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  ------VQHLKYIPFSTSPS-VGERL--------DP--NSQMELVGHSILPH--FYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IRSRKPYLHESRHLHAMRRARGSGGRF
        IR RKPYLHESRH HAMRRAR SGGRF
Subjt:  IRSRKPYLHESRHLHAMRRARGSGGRF

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A93.0e-2762.62Show/hide
Query:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP
        G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+I+SRKPYLHESRH HAMRR RG+GGRF   KK N+  S +  EE  N    HV++ 
Subjt:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEP

Query:  VSEGGSN
         S   S+
Subjt:  VSEGGSN

AT4G15030.1 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink).7.2e-5368.59Show/hide
Query:  YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLV
        Y FIRSEEDD+D SWEQ+LVKRYYDKLFKE   YCIADM++YK+GK+GLRWR EKEVM+GKGQF+CG+KHCDEK+GLASYEVNFSY EAGE+KQALVKLV
Subjt:  YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLV

Query:  TCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS
         CERC++KL+YK+ KE E+ E  E++  KRKR     S SED      +RK   RS
Subjt:  TCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS

AT4G15030.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink).7.2e-5368.59Show/hide
Query:  YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLV
        Y FIRSEEDD+D SWEQ+LVKRYYDKLFKE   YCIADM++YK+GK+GLRWR EKEVM+GKGQF+CG+KHCDEK+GLASYEVNFSY EAGE+KQALVKLV
Subjt:  YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLV

Query:  TCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS
         CERC++KL+YK+ KE E+ E  E++  KRKR     S SED      +RK   RS
Subjt:  TCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS

AT5G12840.2 nuclear factor Y, subunit A14.4e-2640.27Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERL
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERL

Query:  DPNSQM------------ELVGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            ELVGH I         P++ GL  A                 R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELVGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  RSRKPYLHESRHLHAMRRARGSGGRF
        R RKPYLHESRH HAMRRAR SGGRF
Subjt:  RSRKPYLHESRHLHAMRRARGSGGRF

AT5G12840.4 nuclear factor Y, subunit A14.4e-2640.27Show/hide
Query:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERL
        M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N +    V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT----VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERL

Query:  DPNSQM------------ELVGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            ELVGH I         P++ GL  A                 R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELVGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  RSRKPYLHESRHLHAMRRARGSGGRF
        R RKPYLHESRH HAMRRAR SGGRF
Subjt:  RSRKPYLHESRHLHAMRRARGSGGRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGTTCGGCTCCCTGAAGAACGCCATTTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTTGTTGATCTTTCTTAACATGTCCATAGCTCATTCCCCTGG
AGGTTTCTCTGAGGCTACAGTCATCCTTACATACATTTTGATGCAAGAGATTTCTCAGCTAACCTTGAGATTAGTTCAAGGTAATAAAATTTATTATTTAGAGACTAGAG
TAAGTGAAAAAAAGAAAAAGAAAAAGAAAGAAAGATATCAATCCCAGGAAGGACAAATGTTTTGGTGGGGCAGGAGTGTTTGTATATGTCGGGTGAGGAAAGGAGAAGAT
TTTATATATTTGTGCGAAATGTATAGTATTAAGACTTCAAGTTGGTTTGATATCAAAGTTGAATATTGTAATGGAGGCACTAGACAGAGAGCACCATATCTTAAAACATT
TGAAAATTATGCCAAATTCATGTCAGACAATGGACTAGCAAATAGGCATATCTTCAATTTTTTAATAGCTCCTTTGTCATTAGAGGAGTTTTCAGTAGGAAATGAACTAG
GTTCATACGGGTTCATTCGTTCTGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTTAAAGAGTATCCTATATACTGC
ATAGCTGATATGACACAATACAAAAGTGGGAAGATTGGTCTCAGGTGGCGTGTAGAGAAGGAAGTAATGTCTGGCAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGA
TGAGAAAGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGATGCTCAAAGAAGC
TTCACTACAAGAGAAATAAAGAAAAGGAGAAACTGGAAAGGATGGAGCAAGAAATGTCCAAAAGAAAGAGGCCAAGTGATGACAGTTCAGATAGTGAAGATGCGGGCAGC
AGAACAAGGAGGAGAAAAGGCACTAATCGTTCTTACGTGGCGCTCATGCATTCGGTGGCACGAAATTTGCGTGCTGCATGTCATAATAGCACAAACGACTTGTTACGATC
ATTTAACGGTTCAGTACGGCACTGTTATCACGGCGTTATAAAATGGAGTTCTAGTGTAATTGTCAGAGCTAAAGCTTTCCTAGGGTTCGATCGTCTGTTTCACATCACAG
TTAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCAT
GGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGA
AAATACTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCGACATCCCCATCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGA
TTTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCGTTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGA
AGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAGAAGTAGAAAGCCGTATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGG
AGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTG
GATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTC
TTCAATGGTGGAAAGTCGAATGGCCTTGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGTTCGGCTCCCTGAAGAACGCCATTTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTTGTTGATCTTTCTTAACATGTCCATAGCTCATTCCCCTGG
AGGTTTCTCTGAGGCTACAGTCATCCTTACATACATTTTGATGCAAGAGATTTCTCAGCTAACCTTGAGATTAGTTCAAGGTAATAAAATTTATTATTTAGAGACTAGAG
TAAGTGAAAAAAAGAAAAAGAAAAAGAAAGAAAGATATCAATCCCAGGAAGGACAAATGTTTTGGTGGGGCAGGAGTGTTTGTATATGTCGGGTGAGGAAAGGAGAAGAT
TTTATATATTTGTGCGAAATGTATAGTATTAAGACTTCAAGTTGGTTTGATATCAAAGTTGAATATTGTAATGGAGGCACTAGACAGAGAGCACCATATCTTAAAACATT
TGAAAATTATGCCAAATTCATGTCAGACAATGGACTAGCAAATAGGCATATCTTCAATTTTTTAATAGCTCCTTTGTCATTAGAGGAGTTTTCAGTAGGAAATGAACTAG
GTTCATACGGGTTCATTCGTTCTGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTTAAAGAGTATCCTATATACTGC
ATAGCTGATATGACACAATACAAAAGTGGGAAGATTGGTCTCAGGTGGCGTGTAGAGAAGGAAGTAATGTCTGGCAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGA
TGAGAAAGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGATGCTCAAAGAAGC
TTCACTACAAGAGAAATAAAGAAAAGGAGAAACTGGAAAGGATGGAGCAAGAAATGTCCAAAAGAAAGAGGCCAAGTGATGACAGTTCAGATAGTGAAGATGCGGGCAGC
AGAACAAGGAGGAGAAAAGGCACTAATCGTTCTTACGTGGCGCTCATGCATTCGGTGGCACGAAATTTGCGTGCTGCATGTCATAATAGCACAAACGACTTGTTACGATC
ATTTAACGGTTCAGTACGGCACTGTTATCACGGCGTTATAAAATGGAGTTCTAGTGTAATTGTCAGAGCTAAAGCTTTCCTAGGGTTCGATCGTCTGTTTCACATCACAG
TTAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCAT
GGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGA
AAATACTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCGACATCCCCATCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGA
TTTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCGTTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGA
AGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAGAAGTAGAAAGCCGTATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGG
AGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTG
GATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTC
TTCAATGGTGGAAAGTCGAATGGCCTTGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTG
AAAGTTTCTTGATGGGAATGGGGCTTCCTTCTCCAACGCTGTTTAACCAGTTTCACTGCAAAAAAACTCGAGATTCGGTAAGATCGTTGATTCTTTTAAGGCTGTGTTTC
TGGTTGCACAAGTTGGTGGATTTACCCCCCTTCTCTGCTGGGAAGAACACCGCTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGAAGGAGGATTAAGA
AATGCAGTGCACCAAAAATGTGGTACTTTCGCTCTGCTATTTCCTTTCTCTTTACCTTTTCTATTTCCTATGTAATTCTAATTCTGAATTGTGTCTCTGAAACACAAAGA
TTTGATGTGTGCAGACTTGTAATTTATTTTAGACGCAGTTATGTGCTGTGTATCTATTCAACTTTGTGTGCTTGTTTTCAGATGATATTCATTTTCAAGTGTGTGCGTAC
ATTAAATTATACATAACAAGGA
Protein sequenceShow/hide protein sequence
MASFGSLKNAIFEREERKQCVLLLLIFLNMSIAHSPGGFSEATVILTYILMQEISQLTLRLVQGNKIYYLETRVSEKKKKKKKERYQSQEGQMFWWGRSVCICRVRKGED
FIYLCEMYSIKTSSWFDIKVEYCNGGTRQRAPYLKTFENYAKFMSDNGLANRHIFNFLIAPLSLEEFSVGNELGSYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYC
IADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGS
RTRRRKGTNRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVRAKAFLGFDRLFHITVNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWH
GVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSILPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRR
RQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAF
FNGGKSNGLGLSTYNSKLADESMQVNAAPQRAIPIK