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CmoCh08G005540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G005540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionOxidoreductase/transition metal ion-binding protein
Genome locationCmo_Chr08:3406432..3406797
RNA-Seq ExpressionCmoCh08G005540
SyntenyCmoCh08G005540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593338.1 hypothetical protein SDJN03_12814, partial [Cucurbita argyrosperma subsp. sororia]8.4e-6098.35Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLH AGGTPWGVGFLLVL
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL

Query:  LLFMISYQSYFQERWFPLLSR
        LLFMISYQSYFQERWFPLLSR
Subjt:  LLFMISYQSYFQERWFPLLSR

XP_022959695.1 uncharacterized protein LOC111460692 [Cucurbita moschata]3.4e-61100Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL

Query:  LLFMISYQSYFQERWFPLLSR
        LLFMISYQSYFQERWFPLLSR
Subjt:  LLFMISYQSYFQERWFPLLSR

XP_023514532.1 uncharacterized protein LOC111778789 [Cucurbita pepo subsp. pepo]3.2e-5996.69Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLI+SPLLLLL VHWLSNAGNFLLPEKDSLH AGGTPWGVGFLLVL
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL

Query:  LLFMISYQSYFQERWFPLLSR
        LLFMISYQSYFQERWFPLLSR
Subjt:  LLFMISYQSYFQERWFPLLSR

XP_023548678.1 uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]1.3e-4982.68Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV
        MA NG SSA+NS SQPTFPLHLCFFFLIL MFL+FSW+S YES VEGVFDQLKLLLIVSPLLLLLLVHWLSN  N        LPEKDSLH AGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_038898802.1 uncharacterized protein LOC120086305 [Benincasa hispida]5.8e-5387.4Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV
        MA+N GSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSPLLLLL+VHWLSN  N        LPE+DSLH AGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GFLLVLLLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

TrEMBL top hitse value%identityAlignment
A0A0A0K9W6 Uncharacterized protein1.2e-4886.44Show/hide
Query:  ANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLF
        AN+HSQPTFPLHLCFFFLILLMFLSFSWYSNYES VE VFDQLKLLLIVSPLLLLLLVHWLSN  +        LPEKDSLH AGGTPWGVGFLLVLLLF
Subjt:  ANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLF

Query:  MISYQSYFQERWFPLLSR
        M+SYQSYFQERWFPLLSR
Subjt:  MISYQSYFQERWFPLLSR

A0A1S3CE82 uncharacterized protein LOC1034998791.0e-4785.71Show/hide
Query:  AANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLL
        A   HSQPTFPLHLCFFFLILLMFLSFSWYSNYES VE VFDQLKLLLIVSPLLLLLLVHWLSN  N        LPEK+SLH AGGTPWGVGFLLVLLL
Subjt:  AANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPLLSR
        FMISYQSYFQERWFPLLSR
Subjt:  FMISYQSYFQERWFPLLSR

A0A6J1GPN5 uncharacterized protein LOC1114563234.2e-4981.1Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV
        MA NG SS +NS SQPTFPLHLCFFFLIL MFL+FSW+S YES VEGVFDQLKLLLIVSPLLLLLL+HWLSN  N        LPEKDSLH AGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

A0A6J1H718 uncharacterized protein LOC1114606921.6e-61100Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
        MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVL

Query:  LLFMISYQSYFQERWFPLLSR
        LLFMISYQSYFQERWFPLLSR
Subjt:  LLFMISYQSYFQERWFPLLSR

A0A6J1JW83 uncharacterized protein LOC1114884351.4e-4981.1Show/hide
Query:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV
        MA NG SS  NS SQPTFPLHLCFFFLIL MFL+FSWYS YES VEGVFDQLKLLLI+SPLLLLLLVHWLSN  N        LPEKDSLH AGGTPWGV
Subjt:  MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFP+LSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein7.6e-1134.43Show/hide
Query:  SSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN--FLLPEKDSLHH-----------AGGTPWG
        SS  +S S    P  +     +  +FL  SWY + E   E   +Q+   L++ PL L++LV WLS+  N   LL    S               G +PWG
Subjt:  SSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGN--FLLPEKDSLHH-----------AGGTPWG

Query:  VGFLLVLLLFMISYQSYFQERW
        V  L+VLLL ++ YQS F E W
Subjt:  VGFLLVLLLFMISYQSYFQERW

AT2G31940.1 unknown protein1.1e-3057.76Show/hide
Query:  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSN---AGNFL-----LPEKDSLHHAGGTPWGVGFLLVLLL
        +    P  PLHLC F LILLMF++ SWY++YE V+EG   Q KL L+ SPLLLLL VH+LS+    G  +     L E++SL+ AGGTPWGV F+LV L 
Subjt:  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSN---AGNFL-----LPEKDSLHHAGGTPWGVGFLLVLLL

Query:  FMISYQSYFQERWFPL
        FM+SYQS FQERWFPL
Subjt:  FMISYQSYFQERWFPL

AT5G19875.1 unknown protein1.8e-2857.58Show/hide
Query:  HLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLL--PEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFP
        HLCF F+++   LSF+WY N+ES++E   D LKL+ I +PL LLLLVH+ S   +F +  PE+DS+H AG +PWGV  +LVL+LFM+SYQS FQERWFP
Subjt:  HLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLL--PEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFP

AT5G42146.1 unknown protein6.1e-0833.94Show/hide
Query:  PLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLP--------EKDSLHHAGGTPWGVGFLLVLLLFMISYQSY
        PL L     I+ + L  S Y  Y+  VE     LKL ++  P+L + ++  LS     L          +  SL   G  PWGV  +L+LLL ++S QSY
Subjt:  PLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLP--------EKDSLHHAGGTPWGVGFLLVLLLFMISYQSY

Query:  FQERWFPLL
        F   W+P L
Subjt:  FQERWFPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTG
GTACTCCAATTACGAGTCGGTTGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCG
GAAACTTTCTTTTACCGGAAAAAGACTCGCTCCACCACGCCGGTGGGACGCCATGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCGTACCAGTCCTAC
TTCCAAGAACGGTGGTTTCCTCTATTGAGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTG
GTACTCCAATTACGAGTCGGTTGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCG
GAAACTTTCTTTTACCGGAAAAAGACTCGCTCCACCACGCCGGTGGGACGCCATGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCGTACCAGTCCTAC
TTCCAAGAACGGTGGTTTCCTCTATTGAGCCGGTGA
Protein sequenceShow/hide protein sequence
MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSY
FQERWFPLLSR