; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G005740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G005740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr08:3522234..3524109
RNA-Seq ExpressionCmoCh08G005740
SyntenyCmoCh08G005740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058699.1 hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa]2.2e-4190.48Show/hide
Query:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG
        + LTEE+GSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQCQLELAKTS+AKG
Subjt:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG

Query:  KLKIL
        KLKIL
Subjt:  KLKIL
KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]4.7e-47100Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
        LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL
KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-47100Show/hide
Query:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
        LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK
Subjt:  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLK

Query:  IL
        IL
Subjt:  IL
XP_022959742.1 uncharacterized protein LOC111460722 [Cucurbita moschata]1.7e-41100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
XP_023004762.1 uncharacterized protein LOC111497967 [Cucurbita maxima]2.2e-4198.92Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein7.1e-4190.48Show/hide
Query:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG
        + LTEE GSC MVLDSVLSSPHRRSPSFRK+F PNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQC LELAKTSMAKG
Subjt:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG

Query:  KLKIL
        KLKIL
Subjt:  KLKIL
A0A5D3CG60 Uncharacterized protein1.1e-4190.48Show/hide
Query:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG
        + LTEE+GSCNMVLDSVLSSPHRRSPSFRK+F PNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC GLTG QKAQCQLELAKTS+AKG
Subjt:  YELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKG

Query:  KLKIL
        KLKIL
Subjt:  KLKIL
A0A6J1DQE0 uncharacterized protein LOC1110221412.3e-3690.43Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
A0A6J1H8Z6 uncharacterized protein LOC1114607228.3e-42100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
A0A6J1KRB5 uncharacterized protein LOC1114979671.1e-4198.92Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein5.9e-2463.44Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS--SSCSGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR    +K +  +ELGSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG+  SSC GLTG  KA CQL+L + +++KGKLK
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS--SSCSGLTGAQKAQCQLELAKTSMAKGKLK
AT1G79660.1 unknown protein7.2e-2259.14Show/hide
Query:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS--CSGLTGAQKAQCQLELAKTSMAKGKLK
        MVLD ++SSP RR  + +K +  ++LGS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG+    CSG+TG  KA CQ+E  + S + GKLK
Subjt:  MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS--CSGLTGAQKAQCQLELAKTSMAKGKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAGATTTCTGAAGTTATCAAGTCACAACAAGAAGAGTTATATGAGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCA
CAGGAGGTCCCCATCATTCCGAAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTT
TTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCC
ATGGCTAAAGGGAAACTGAAAATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAGATTTCTGAAGTTATCAAGTCACAACAAGAAGAGTTATATGAGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCA
CAGGAGGTCCCCATCATTCCGAAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTT
TTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCC
ATGGCTAAAGGGAAACTGAAAATTCTTTAATACTCGGGTTAGTGCTCTGCAATTTGTGCATTTTGTTTGTAATTCCGAACCATTTGGGTTGAAGATTTAAAAAGAAAAAA
AAAAAAAAGAAAGAAAACGAGTTCAAGTTAGTCAGTTTGCCATACAAAGTTGTGTAGTAAAATGCAAGTGAACTCTGTATACATTATTATCTGAGAAATGAATTTCTTAA
CACAAAGAATGCATTAACCAGTCATTTTGTGTTTGCTGATTAGTGATGTATGTGGTCTTGGGTGCATGAAAATGAACGGTGTTATTCTGCAGAGACGAATTTAATGTTTT
ATTTGAACAATTCCCTGGTGCCTAAGATGCCTGAAATCTGTTCGTTTGACTCATGAATAGCTCTGTGTACTCATAGTAGCATAATTGTTGGGTAATTGATAATTCATAGT
AAATTTTAGGTAGACGGTGATTGTGACTTTTAAACTCATTTCGGTCTAATTTATTTATTATTTACACAACCTTTGTTAACTACTGTTCCCGGGGGTATACAATTTTTCGG
GGGTATACAATTTTTAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGATCAAAAGTGTATCACATGAGAATCCATTATTTATATATTTAT
ATGATTCTTTGATAAAATCAATCAGGAACGTTCAAATAGGTTTGATTCTTTATCGGATCATCCAATTTATTGTAATTCTAGATCAACTTAGATTAGTTTACTGTCTAAAA
TGTGAGAAAATAAACATATTTTTTTAAAAA
Protein sequenceShow/hide protein sequence
MLEISEVIKSQQEELYELTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTS
MAKGKLKIL