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CmoCh08G006080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G006080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCmo_Chr08:3692189..3693195
RNA-Seq ExpressionCmoCh08G006080
SyntenyCmoCh08G006080
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]1.9e-2167.5Show/hide
Query:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        K + +   + E +KMVIGSRPPGC NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]8.4e-2264.13Show/hide
Query:  SDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        S  G  E G  E  E ++     ++KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKCRCGNKIYQP
Subjt:  SDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4997.89Show/hide
Query:  LFWPRSDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        LFWPRS GGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSS VEDDSYYLLSWKCRCGNKIYQP
Subjt:  LFWPRSDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-4997.89Show/hide
Query:  LFWPRSDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        LFWPRS GGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSS VEDDSYYLLSWKCRCGNKIYQP
Subjt:  LFWPRSDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]3.2e-2167.5Show/hide
Query:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        K + +     E +KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein4.1e-2264.13Show/hide
Query:  SDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        S  G  E G  E  E ++     ++KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKCRCGNKIYQP
Subjt:  SDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein1.6e-2167.5Show/hide
Query:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        K + +     E +KMVIGSRPPGC+NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

A0A2N9J8K1 Epidermal patterning factor-like protein2.9e-2060Show/hide
Query:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        K  G++  G   S    EQ+KMV+GS+PPGC NKC +CRPCMA  V+P+H++K   A   SS  EDDSYYLLSWKCRCGNK+YQP
Subjt:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein9.1e-2267.5Show/hide
Query:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP
        K + +   + E +KMVIGSRPPGC NKC +CRPCMAAAVVP HR K  KAF    SS  E+DSYYLLSWKC+CGNKIYQP
Subjt:  KGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAF--VPSSAVEDDSYYLLSWKCRCGNKIYQP

K7KZD9 Epidermal patterning factor-like protein1.5e-1967.65Show/hide
Query:  EQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        EQ+KMVIGS+PP C NKCKSCRPCMA  VVP H+K+  K F  SS  +DD+YYLLSWKC+CG+K++QP
Subjt:  EQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase1.1e-0534.12Show/hide
Query:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        K  G  +KG R         ++++GSRPP C NKC  C PC A  V+  HR            +    YY   W C    KIY P
Subjt:  KETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.2e-0638.71Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      P H        VP        YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 13.3e-0533.75Show/hide
Query:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFK-------AFV--PSSAV----EDDSYYLLSWKCRCGNKIYQP
        + K  +GS PP C N+C +C PCMA  V     +  F         FV  PSS      +  +Y  + WKC C    Y P
Subjt:  QKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFK-------AFV--PSSAV----EDDSYYLLSWKCRCGNKIYQP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 56.7e-0629.35Show/hide
Query:  KETGNLEKGERE-------SYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        + +G L +G++E         +VD+++    GS PP C  KC  C PC A  V            +    +    YY  +W+C+CGNK++ P
Subjt:  KETGNLEKGERE-------SYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 23.9e-0631.68Show/hide
Query:  GGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYL-------------LSWKCRCGNKIYQ
        G  E  ++E  +     V    + +IGSRPP CE  +C+SC  C A  V    + K       SS+   ++ +L             +SWKC+CGN IY 
Subjt:  GGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYL-------------LSWKCRCGNKIYQ

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein2.4e-0634.29Show/hide
Query:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSAVEDDS--YYLLSWKCRCGNKIYQP
        K+ V+GS PP C  KC++C+PC+     +  AH              +DDS  YY + W CRC +++++P
Subjt:  KKMVIGSRPPGCENKCKSCRPCMAAA--VVPAHRKKWFKAFVPSSAVEDDS--YYLLSWKCRCGNKIYQP

AT2G30370.1 allergen-related3.7e-0738.71Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      P H        VP        YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

AT2G30370.2 allergen-related3.7e-0738.71Show/hide
Query:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        +GS PP C +KC  C PC      P H        VP        YY  +W+C+CGNK+Y P
Subjt:  IGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

AT3G22820.1 allergen-related4.8e-0729.35Show/hide
Query:  KETGNLEKGERE-------SYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP
        + +G L +G++E         +VD+++    GS PP C  KC  C PC A  V            +    +    YY  +W+C+CGNK++ P
Subjt:  KETGNLEKGERE-------SYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKIYQP

AT4G37810.1 unknown protein2.8e-0731.68Show/hide
Query:  GGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYL-------------LSWKCRCGNKIYQ
        G  E  ++E  +     V    + +IGSRPP CE  +C+SC  C A  V    + K       SS+   ++ +L             +SWKC+CGN IY 
Subjt:  GGKETGNLEKGERESYVVDEQKKMVIGSRPPGCEN-KCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYL-------------LSWKCRCGNKIYQ

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGATGATGATGATAATGGAGAAATGGGAGCTCAAGAAACAAGGCATTGGTTGTTTTGGCCGAGGAGCGACGGAGGGGGAAAAGAAACGGGGAATTTGGAGAAGGG
TGAAAGAGAGAGTTATGTGGTGGATGAACAAAAGAAAATGGTGATTGGTTCCAGGCCGCCGGGGTGTGAGAACAAGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGG
TGGTGCCGGCGCATAGGAAGAAATGGTTCAAAGCATTTGTTCCGTCGTCTGCAGTTGAAGATGATAGCTACTATCTTCTCTCGTGGAAATGCCGATGTGGGAATAAGATC
TATCAGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGATGATGATGATAATGGAGAAATGGGAGCTCAAGAAACAAGGCATTGGTTGTTTTGGCCGAGGAGCGACGGAGGGGGAAAAGAAACGGGGAATTTGGAGAAGGG
TGAAAGAGAGAGTTATGTGGTGGATGAACAAAAGAAAATGGTGATTGGTTCCAGGCCGCCGGGGTGTGAGAACAAGTGCAAGAGTTGCAGGCCGTGCATGGCGGCGGCGG
TGGTGCCGGCGCATAGGAAGAAATGGTTCAAAGCATTTGTTCCGTCGTCTGCAGTTGAAGATGATAGCTACTATCTTCTCTCGTGGAAATGCCGATGTGGGAATAAGATC
TATCAGCCCTAG
Protein sequenceShow/hide protein sequence
MMDDDDNGEMGAQETRHWLFWPRSDGGGKETGNLEKGERESYVVDEQKKMVIGSRPPGCENKCKSCRPCMAAAVVPAHRKKWFKAFVPSSAVEDDSYYLLSWKCRCGNKI
YQP