CuGenDBv2

Gene ID	CmoCh08G006340
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	WD repeat-containing protein 43
Genome location	Cmo_Chr08:4133304..4136809
RNA-Seq Expression	CmoCh08G006340
Synteny	CmoCh08G006340
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593430.1 WD repeat-containing protein 43, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

97.44

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKME HKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTD+GVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANI LEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

XP_022964606.1 WD repeat-containing protein 43 isoform X1 [Cucurbita moschata]

0.0e+00

97.92

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKMEQHKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

XP_022964607.1 WD repeat-containing protein 43 isoform X2 [Cucurbita moschata]

0.0e+00

96.33

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKMEQHKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL          NIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

XP_023000348.1 WD repeat-containing protein 43 [Cucurbita maxima]

0.0e+00

93.62

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKME HKSPPITAFT NGDYLAILSSNGT  IW TSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVL VNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGG+IGLSFADKGRRLHT+GSNG+AFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTD+GVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPF+SECRN+NNGEDSIVVLSVSVSGVAYLWKLKFLSEDKV+PTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL          NIALEKEGPHEI+QAVTSPKSKKSKKKRAASDLDSQ AGDVSDVGNED SNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLA+LNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD EAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEV-EAFDDLSAGEVDDDMSE
        DEEGGGVEV EAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEV-EAFDDLSAGEVDDDMSE

XP_023513462.1 WD repeat-containing protein 43 [Cucurbita pepo subsp. pepo]

0.0e+00

94.57

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Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKME HKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDG+TDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVL VNASSGE KWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNG+AFKMNAETGSIINEFKASKKSISSSAFS DEKYLAVAGKKLKILSTD+GVELMVHPDKLGPVKL+SIS+DAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCD+SAGKLSRGPVLSMKHPPFVSECRNI+NGEDSIVVLSVSVSGVAYLWKLKFLSE KV+PTKVTVKVNNVESAEE+HGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        V+SSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKED NIALEKEGPHEI+QAVTSPKSKKSKKKRAASDLDSQ AGDVSDVGNED SNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLE+QNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+EAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CDX9 WD repeat-containing protein 43

1.5e-267

78.81

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MK E  KSPPITAFTP+GDYLAI SSNGT  IW+T DGSLLAEWKD DGK D GYSC+ACC +GKKRK+S CL+AIGTN GDVL VNAS+GE KWVS GC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        H GGVIGLSFA++GRRLHTVGSNG+A +M+ ETG+II EFKASKKSISSSAFSLDEKYLAVAGKKLKILS DDG EL+VHPDKL PVKL SISDDAKTI+
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSE GAKH+QVWWCDMSAGK SRGPVLSM HPPFVSECRN++N EDS+VVLSVSVSG AYLWKLK LSED+V PTKV+VK N+ +SAEENHGSAKKNR+S
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALE-----------KEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNED
        VL+S I  +GDNEVSVLVTHGS+DLPQH++L+IGY  KEDAN A E           ++GPHEI+Q +T PKSKKSKKKRAASDLDS  AGDVSDVGN D
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALE-----------KEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNED

Query:  MSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISI
         S+V+FNDDLNEP+MG+KLASLNL +QNED   EQ++PSVP IPPSADSVQVLLKQAL ADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLH++IS 
Subjt:  MSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISI

Query:  IQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSD
        IQS           RGAILVCA+PWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLDEE  +NDAIVPIIYEE+DSD
Subjt:  IQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSD

Query:  DKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE
        + E +GDEMETDE+    EVEAFDDLSAGEVDDDMSE
Subjt:  DKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE

A0A6J1D938 WD repeat-containing protein 43

1.8e-265

79.09

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKK--RKNSSCLIAIGTNGGDVLTVNASSGETKWVSA
        MK E  KSPPITAFTP+GDYLAILS N T  IW+  DGSLLAEWKD +GKTD GYSC+ACCFV KK  +K SSC+IAIGT+ GDVL VNASSGETKWVSA
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKK--RKNSSCLIAIGTNGGDVLTVNASSGETKWVSA

Query:  GCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKT
        GCH+GGVIGLSFA+KGRRL TVGSNG+A +M+ ETG+II EFKASKKSISSSAFS DEKYLAVAGKKL+ILSTD+G ELMVH DKLGPVKL SISDDAK 
Subjt:  GCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKT

Query:  IITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNR
        IITSE GAKH+QVWWCDMSA KLSRGPVLSMKHPPFVSEC+NI+N EDSIVVLSVSVSGVAY+W+LK LSED+V+P KVTVK N+ +SAEENHGSAKKNR
Subjt:  IITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNR

Query:  ISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEK-----------EGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGN
        ISV++S I G GDNEVSVLVTHGSMD PQ ++ NIGY  KED N A EK           +GPHEI+QAVT+PKSKKSKKKRAASD+DS  AGDVS VGN
Subjt:  ISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEK-----------EGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGN

Query:  EDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALI
         D S+VLFNDD+NEPTMG+KLASLNL +Q+EDE+HEQ+EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLH+LI
Subjt:  EDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALI

Query:  SIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDD
        SIIQS           RGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLDEE ++NDAIVPIIYE++D
Subjt:  SIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDD

Query:  SDDKESSGDEMETDEEGGGVE-VEAFDDLSAGEVDD
          D + SGDEMETDE+    E  EAF DLSAGEVDD
Subjt:  SDDKESSGDEMETDEEGGGVE-VEAFDDLSAGEVDD

A0A6J1HI85 WD repeat-containing protein 43 isoform X2

0.0e+00

96.33

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKMEQHKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL          NIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

0.0e+00

97.92

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKMEQHKSPPITAFTPNGDYLAILSSNGT  IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEVEAFDDLSAGEVDDDMSE
        DEEGGGVEVEAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEVEAFDDLSAGEVDDDMSE

A0A6J1KMD0 WD repeat-containing protein 43

0.0e+00

93.62

Show/hide

Query:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC
        MKME HKSPPITAFT NGDYLAILSSNGT  IW TSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVL VNASSGETKWVSAGC
Subjt:  MKMEQHKSPPITAFTPNGDYLAILSSNGT--IWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGC

Query:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII
        HLGG+IGLSFADKGRRLHT+GSNG+AFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTD+GVELMVHPDKLGPVKLDSISDDAKTII
Subjt:  HLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTII

Query:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS
        TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPF+SECRN+NNGEDSIVVLSVSVSGVAYLWKLKFLSEDKV+PTKVTVKVNNVESAEENHGSAKKNRIS
Subjt:  TSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS

Query:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN
        VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVL          NIALEKEGPHEI+QAVTSPKSKKSKKKRAASDLDSQ AGDVSDVGNED SNVLFNDDLN
Subjt:  VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLN

Query:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW
        EPTMGDKLA+LNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQS        
Subjt:  EPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSW

Query:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET
           RGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD EAEENDAIVPIIYEEDDSDDKESSGDEMET
Subjt:  LIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET

Query:  DEEGGGVEV-EAFDDLSAGEVDDDMSE
        DEEGGGVEV EAFDDLSAGEVDDDMSE
Subjt:  DEEGGGVEV-EAFDDLSAGEVDDDMSE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

1.6e-08

22.26

Show/hide

Query:  AFTPNGD-YLAILSSNG--TIWNTSDGSLLAEWKDPDGKTDAGYSCIACCFV---------GKKRK-------NSSCLIAIGTNGGDVLTVNASSGE--T
        AF+P+   Y A+ S++G   +W T++  L  E+  P        +C+A              KKRK       N + L+A+GT  G +L  +   GE  +
Subjt:  AFTPNGD-YLAILSSNG--TIWNTSDGSLLAEWKDPDGKTDAGYSCIACCFV---------GKKRK-------NSSCLIAIGTNGGDVLTVNASSGE--T

Query:  KWVSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGK--KLKILSTDDGVELMV-HPDKLGPVKLD
        K +S G H   V  + +      L++   +    + N +T  +  ++K    S+SS   S D K L  AG+  KL +L T +       H   +  +   
Subjt:  KWVSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGK--KLKILSTDDGVELMV-HPDKLGPVKLD

Query:  SISD-------DAKTIITSEPGAKH---IQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVK
        +I         D  T +    GA H   + VW       + S     ++   P   +     N E+ + +  V   G  +L+      E  +N       
Subjt:  SISD-------DAKTIITSEPGAKH---IQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVK

Query:  VNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPH----EIKQAVTSPKS--KKSKKKRAASDL
         +N        G  KK+    +     G   +++S+L+ +GS   P  T+  +   ++E  ++ L ++  +    +++ A+T  ++    S+ K     +
Subjt:  VNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPH----EIKQAVTSPKS--KKSKKKRAASDL

Query:  DSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQL
            A         +          NE ++ ++L +++++   + +   Q            +S  VLL Q L ++D  +L + L T++  +I K++ ++
Subjt:  DSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQL

Query:  NSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE---
            ++ LL  L   +Q   +          A+L+  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E   
Subjt:  NSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEE---

Query:  -AEENDAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE
         A        ++YEE+ S++ ES  +  + D E    E E   + S  E D+D+ E
Subjt:  -AEENDAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE

Q6ZQL4 WD repeat-containing protein 43

2.3e-07

22.32

Show/hide

Query:  AFTPNGD-YLAILSSNG--TIWNTSDGSLLAEWKDPDGKTDAGYSCIACC---------FVGKKR-------KNSSCLIAIGTNGGDVLTVNASSGET-K
        AF+P+   Y A+ SS+G   +W T++  L  E+  P        +C+A              KKR       K+ + L+A+GT  G +L  +   GE   
Subjt:  AFTPNGD-YLAILSSNG--TIWNTSDGSLLAEWKDPDGKTDAGYSCIACC---------FVGKKR-------KNSSCLIAIGTNGGDVLTVNASSGET-K

Query:  WVSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGK--KLKILSTDDGVELMV-HPDKLGPVKLDS
         +++G H   V  + +      L++   +    + + +T  +  ++K    S+SS   S D K L  AG+  KL +L T +       H   +  ++  +
Subjt:  WVSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGK--KLKILSTDDGVELMV-HPDKLGPVKLDS

Query:  I------SDDAKTIITSEPGAKH---IQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVN
        I        D  T +    GA H   + VW       + S     ++   P   +     N E+ + +  V   G  +L+      E  +N        +
Subjt:  I------SDDAKTIITSEPGAKH---IQVWWCDMSAGKLSRGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVN

Query:  NVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPH----EIKQAVTSPKS--KKSKKKRAASDLDS
        N        G  KK     +         +++S+L+ +G+   P  T+  +   +K D +I LE++  +     ++ A+T  K+    S+ K     +  
Subjt:  NVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEKEGPH----EIKQAVTSPKS--KKSKKKRAASDLDS

Query:  QKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNS
          A           +         E T+ ++L +++L+ +   ++ +             +S  VLL Q L ++D  +L + L TK+  +I +++ ++  
Subjt:  QKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSIAQLNS

Query:  SDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEEN-
          V+ LL  L   +Q   +          A L+  I WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E  +  
Subjt:  SDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDEEAEEN-

Query:  ---DAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE
                ++YEE+ S++ ES  +  E D +    E E  D      VD+D  E
Subjt:  ---DAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

5.1e-50

51.11

Show/hide

Query:  KSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPA--IPPSADSVQVLLKQALRADDRALLLEC
        K KK  KKRA  + D     D     +ED   VL +D LNEPT+GDKL SL+L    +  + E +  S P    PP+A SV VLL+QAL ADDR+LLL+C
Subjt:  KSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPA--IPPSADSVQVLLKQALRADDRALLLEC

Query:  LYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSS
        LY +D++VI+ S+A+LNS++VLKLL+AL+ I+QS           RGAIL C IPW++ LLL H+S IMSQESSLLALN++YQLIESR+ST  +A+ +SS
Subjt:  LYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSS

Query:  SLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDE--METDEEGGGVEVEAFDDLSAGEVDDDMSE
         LD L    LDEE +E     P+IYE+ DSD+ E  G E  METDEE      EA D ++  E  DDMS+
Subjt:  SLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDE--METDEEGGGVEVEAFDDLSAGEVDDDMSE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

3.3e-33

25.58

Show/hide

Query:  ITAFTPNGDYLAILSSNG--TIWNTSDGSLLAEWKD-------------PDGKTDAGYSCIACCFV--GKKRKNSSCLIAIGTNGGDVLTVNASSGETKW
        +T+F+P  DYLA+ + +G   IW+T  G +  E+ D               G     Y+C+    +   KKRK  + ++ +GT GGDVL ++ +SG+ KW
Subjt:  ITAFTPNGDYLAILSSNG--TIWNTSDGSLLAEWKD-------------PDGKTDAGYSCIACCFV--GKKRKNSSCLIAIGTNGGDVLTVNASSGETKW

Query:  VSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDD
          + CH GGV  +S + K   +++ G++G+  +++  +G++I +FKAS K++SS   S D K L  A  +LK  +  D  ++       G V+  + ++D
Subjt:  VSAGCHLGGVIGLSFADKGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDD

Query:  AKTIITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPP-FVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSE-DKVNPTKVTVKVNNVESAEENHGS
         K +++S  G ++I VW  D  A K S   VL+++HPP FV      N  E  + VL++S  GV Y W    + E     PTKV      + +A+ +   
Subjt:  AKTIITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPP-FVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSE-DKVNPTKVTVKVNNVESAEENHGS

Query:  AKKNRISVLSSTIQG-LGDNEVSVLVTHGSMDLP--QHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDM
         K +   + ++ +QG L        +  G +  P  Q  VL  G     D  +   K+G   I   +T   SK SK++           G  + V   D 
Subjt:  AKKNRISVLSSTIQG-LGDNEVSVLVTHGSMDLP--QHTVLNIGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDM

Query:  SNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVL-LKQALRA--------DDRALLLECLYTKDD-------KVISKSIAQL
        ++        E  +       +L E+   + H  D+ +       AD V+   ++  LR+        + + L    +    D       K +  ++  +
Subjt:  SNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVL-LKQALRA--------DDRALLLECLYTKDD-------KVISKSIAQL

Query:  NSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGV------
          S   K L AL ++ Q+R           G  L   +PW+  +++ H+  IMSQE  +   LN+L ++ +SR +  Q  L LS  L  +   +      
Subjt:  NSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGV------

Query:  ----------LDEEAEENDAIVPIIYEEDDSDDKESSGDEMETDE
                  +DE  +E + +    Y E+D++   SS D  + D+
Subjt:  ----------LDEEAEENDAIVPIIYEEDDSDDKESSGDEMETDE

Sequences

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CDS sequence

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ATGAAGATGGAGCAGCATAAATCGCCGCCAATCACAGCGTTCACTCCCAACGGCGACTATCTAGCTATCTTGTCCTCCAATGGAACTATTTGGAATACTAGCGATGGGAG
TTTGCTAGCGGAGTGGAAGGATCCTGATGGGAAAACTGATGCTGGTTATTCTTGTATTGCCTGCTGTTTTGTGGGGAAAAAACGTAAAAACAGTTCTTGTCTTATTGCTA
TCGGTACCAACGGAGGGGATGTGTTGACAGTAAATGCTTCGAGCGGTGAAACGAAGTGGGTCTCTGCCGGTTGCCATCTTGGTGGAGTTATTGGCCTTTCTTTTGCGGAC
AAAGGCCGTAGACTGCATACCGTTGGAAGTAACGGAATTGCATTCAAGATGAACGCCGAAACAGGAAGCATTATCAATGAGTTCAAAGCTTCGAAAAAATCAATCTCTTC
TTCAGCCTTTTCACTTGATGAGAAGTACTTAGCTGTAGCTGGCAAAAAGTTGAAGATTTTAAGCACAGATGATGGGGTTGAGCTTATGGTGCACCCTGATAAATTGGGTC
CTGTGAAGCTTGATTCTATATCTGATGACGCTAAAACAATAATTACATCAGAACCTGGAGCCAAACATATTCAAGTGTGGTGGTGTGATATGAGTGCTGGAAAACTTAGT
CGAGGTCCTGTTCTGTCCATGAAGCATCCTCCGTTTGTTTCTGAATGCAGAAATATTAACAATGGGGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCAGGTGTAGC
TTATTTATGGAAATTAAAGTTCCTATCAGAAGACAAGGTTAATCCGACTAAAGTCACTGTTAAAGTTAACAACGTCGAATCAGCTGAGGAAAACCATGGAAGTGCTAAGA
AGAATCGTATTTCTGTCCTCTCTTCCACAATACAAGGTTTAGGAGACAATGAAGTGTCAGTCCTTGTCACTCATGGCTCCATGGACCTACCGCAGCATACTGTCCTTAAT
ATCGGTTATCCTGCAAAGGAAGACGCAAATATCGCACTTGAGAAAGAAGGTCCCCACGAGATCAAACAAGCAGTTACTTCGCCTAAAAGTAAGAAAAGCAAAAAGAAGAG
AGCTGCATCTGATCTCGACAGTCAGAAAGCTGGAGATGTCAGTGATGTCGGCAACGAAGATATGTCTAACGTTCTATTTAATGATGATTTAAACGAGCCAACCATGGGAG
ATAAACTTGCGAGTTTGAATTTAGAGGAACAGAACGAAGACGAGAACCATGAACAAGATGAACCTTCCGTCCCTGCTATCCCACCAAGTGCAGACTCTGTTCAGGTTTTG
CTCAAGCAAGCACTACGTGCAGACGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTCATCTCAAAATCAATAGCACAACTAAATTCTTCAGATGT
TCTCAAGCTTTTGCACGCTCTCATATCCATTATCCAGTCAAGATACCATATCAAAGTTTCATGGCTTATCTACAGAGGGGCAATTCTTGTATGCGCCATCCCTTGGCTGA
GAGGTTTACTTCTTCAACATGCCAGTAGAATAATGTCTCAAGAATCTTCTCTACTCGCCTTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCT
GCTCTTCTGCTATCAAGTAGCTTAGACTTCCTTTACACAGGGGTCCTTGATGAGGAGGCGGAAGAAAATGATGCCATTGTACCGATTATTTACGAGGAGGACGATAGCGA
TGATAAGGAATCGTCGGGAGATGAAATGGAAACCGATGAAGAGGGTGGAGGAGTTGAAGTAGAAGCCTTTGACGATCTTAGTGCTGGTGAAGTGGATGATGATATGAGTG
AATGA

mRNA sequence

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Protein sequence

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MKMEQHKSPPITAFTPNGDYLAILSSNGTIWNTSDGSLLAEWKDPDGKTDAGYSCIACCFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGCHLGGVIGLSFAD
KGRRLHTVGSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVHPDKLGPVKLDSISDDAKTIITSEPGAKHIQVWWCDMSAGKLS
RGPVLSMKHPPFVSECRNINNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRISVLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLN
IGYPAKEDANIALEKEGPHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLASLNLEEQNEDENHEQDEPSVPAIPPSADSVQVL
LKQALRADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHALISIIQSRYHIKVSWLIYRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS
ALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMETDEEGGGVEVEAFDDLSAGEVDDDMSE

CmoCh08G006340 (gene) of Cucurbita moschata (Rifu) v1 genome