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CmoCh08G006350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G006350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein 1
Genome locationCmo_Chr08:4138537..4139037
RNA-Seq ExpressionCmoCh08G006350
SyntenyCmoCh08G006350
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593431.1 hypothetical protein SDJN03_12907, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4599.1Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDS STTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_022964497.1 late embryogenesis abundant protein 1 [Cucurbita moschata]2.4e-45100Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_023000409.1 late embryogenesis abundant protein 1 [Cucurbita maxima]3.5e-4497.3Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGE VGQAQVKKDEV+NQAAN+AQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_023515217.1 late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo]4.5e-4496.4Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISH+VGE VGQAQVKKDEV+NQAAN+AQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]1.0e-2772.07Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MAS QDISH  GE VGQAQVKKDE++NQA+++A ++KD AST     S AQTAS+LKDQAANFLQQTGEQVKNMAQGAA+AVKNTLGMNTD++ N    T
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTN PS  I
Subjt:  NNPTNTPSPTI

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein2.1e-2365.79Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSN-----
        MAS QD+SH   E VGQAQVK+DE++NQ             TT DQSSAAQTA+DLKDQAA+FLQQTGEQVKNMAQGAAEAVKNTLGMNTD++SN     
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSN-----

Query:  -AAANTNNPTNTPS
         A  + NNPTN P+
Subjt:  -AAANTNNPTNTPS

A0A6J1GQ03 late embryogenesis abundant protein 1-like2.1e-2367.27Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQD+S   GE VGQAQVKKDEV++Q           A++T D  SAAQTA+DLKDQAA+FLQQTGEQVK+MAQGAAEAVKNTLGM TD+ +  + N 
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPT
        NNPTN PSPT
Subjt:  NNPTNTPSPT

A0A6J1HHY8 late embryogenesis abundant protein 11.2e-45100Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

A0A6J1JRF1 late embryogenesis abundant protein 1-like3.6e-2364.86Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQD+S+  GE VGQAQ  KD++++Q            ++T D  SAAQTA+DLKDQAANFLQQTGEQVK+MAQGAAEAVKNTLGM TD+ +  A N 
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTN PSPTI
Subjt:  NNPTNTPSPTI

A0A6J1KJU5 late embryogenesis abundant protein 11.7e-4497.3Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGE VGQAQVKKDEV+NQAAN+AQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 16.2e-0436.54Show/hide
Query:  SQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQ-----SSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAA
        +QQ    +  E    AQ  KD+       + ++A+D+     ++      S  +TA   KD +A FLQQTGE+VK MAQGA +AVK T GM  D      
Subjt:  SQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQ-----SSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAA

Query:  ANTN
          TN
Subjt:  ANTN

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.2.0e-0536.75Show/hide
Query:  MASQQDISHSV--GEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSS----S
        MAS QD   SV  G+ VGQA VK+++  N +                             QA+ FLQQ GE+VK+MA  A+EAVKN LG+N D++    +
Subjt:  MASQQDISHSV--GEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSS----S

Query:  NAAANTNNPTNTPSPTI
            +  NP NT SP++
Subjt:  NAAANTNNPTNTPSPTI

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related2.4e-1142.48Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQ--SSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAA
        M+S Q +SHS GE  GQ Q+KK+E +N  +++  +  D  + +  Q  S   Q    L  QA++ +QQTG QVKNMAQGAA+AVKNTLGM+  ++S ++ 
Subjt:  MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQ--SSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAA

Query:  NTNNPTNTPSPTI
             +N P   I
Subjt:  NTNNPTNTPSPTI

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein1.3e-0442.2Show/hide
Query:  MASQQDISHSVGEAVGQAQVKKD---EVINQAANSA--------QEAKDSAS--------TTLDQS-SAAQTASDLKDQAANFLQQTGEQVKNMAQGAAE
        M+ QQ    + G+  GQAQ K +   E   Q A SA        Q A+D A+         T D S SA ++A   ++QAA    QTGE VKNMAQGA +
Subjt:  MASQQDISHSVGEAVGQAQVKKD---EVINQAANSA--------QEAKDSAS--------TTLDQS-SAAQTASDLKDQAANFLQQTGEQVKNMAQGAAE

Query:  AVKNTLGMN
         VKN+LGMN
Subjt:  AVKNTLGMN

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein8.9e-0636.36Show/hide
Query:  ASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN
        ++ Q+IS   G+A GQ Q K   ++++A+N+AQ AK+S                        L++TG+Q+K  AQGA E+VKN  GMN
Subjt:  ASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCAACAAGACATTAGCCACAGCGTCGGCGAGGCCGTCGGCCAAGCTCAGGTGAAGAAGGATGAGGTCATCAACCAAGCAGCTAATTCAGCTCAAGAAGCAAA
AGACAGCGCATCTACTACCCTTGATCAATCCTCAGCTGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACA
TGGCTCAAGGAGCAGCTGAGGCAGTGAAAAACACTCTTGGGATGAACACTGATAGCAGTTCTAACGCCGCCGCCAACACCAACAACCCTACCAACACTCCATCCCCTACA
ATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCCAACAAGACATTAGCCACAGCGTCGGCGAGGCCGTCGGCCAAGCTCAGGTGAAGAAGGATGAGGTCATCAACCAAGCAGCTAATTCAGCTCAAGAAGCAAA
AGACAGCGCATCTACTACCCTTGATCAATCCTCAGCTGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACA
TGGCTCAAGGAGCAGCTGAGGCAGTGAAAAACACTCTTGGGATGAACACTGATAGCAGTTCTAACGCCGCCGCCAACACCAACAACCCTACCAACACTCCATCCCCTACA
ATCTAA
Protein sequenceShow/hide protein sequence
MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPT
I