; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G006360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G006360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionZinc finger protein
Genome locationCmo_Chr08:4141443..4143882
RNA-Seq ExpressionCmoCh08G006360
SyntenyCmoCh08G006360
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044267 - cellular protein metabolic process (biological process)
GO:0140513 - nuclear protein-containing complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593432.1 hypothetical protein SDJN03_12908, partial [Cucurbita argyrosperma subsp. sororia]5.5e-94100Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
Subjt:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

XP_022964373.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita moschata]5.5e-94100Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
Subjt:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

XP_023000400.1 uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima]8.6e-8793.1Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSI-----SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLG+F   GGGSRGRSI     SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSI-----SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG

Query:  AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        AFKDESAATAARGGFD DVAPRGSRSFGFG+NGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD FF
Subjt:  AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

XP_023514793.1 uncharacterized RNA-binding protein C17H9.04c-like isoform X2 [Cucurbita pepo subsp. pepo]3.0e-9298.22Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        SAATAA GGFDFDVAPRGSR+FGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD FF
Subjt:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

XP_038899251.1 uncharacterized RNA-binding protein C17H9.04c-like [Benincasa hispida]1.3e-7182.35Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVA-SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKD
        MNRPGDWNCRSCQHLNFQRRECCQRCGE +  A+LG+FGG     RGR+I     SSYGGVA SPGSDVRPGDWYCGV NCGTHNFANRS+CF CGAFKD
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVA-SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKD

Query:  ESAATAARGGFDFDVAPRGSRSFGFG-SNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF
        ESAA A  GGFDFDV  RGSRSFGFG SNG RGGSSW SGDWICSRSGCNVHNFASRMECFRCNAPRD F
Subjt:  ESAATAARGGFDFDVAPRGSRSFGFG-SNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF

TrEMBL top hitse value%identityAlignment
A0A0A0K718 Uncharacterized protein6.7e-6173.86Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVA--SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFK
        MNRPGDWNCRSCQHLNFQRR+CCQRCGE         F  GGG   G   S S  SSYGG    SPGSDVRPGDWYCGV NCGTHNFANRS+CF CGAFK
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVA--SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFK

Query:  DESAATAAR---GGFDFDVAPRGSRSFGFGSNG--SRGGSS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF
        DESAA+A     GGFDFD   R  RSFGFGS+   SRG SS W SGDWICSRSGCNVHNFASRMECFRCNAPRDSF
Subjt:  DESAATAAR---GGFDFDVAPRGSRSFGFGSNG--SRGGSS-WKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF

A0A5D3CJI6 Transcription initiation factor TFIID subunit 15b-like4.8e-5971.35Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLA--DLGLFGGGGGGSRGRSISSSSSSSYGG--VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGA
        MNRPGDWNCRSCQHLNFQRRECCQRCGE +     +LG+F G  G           SSSYGG    SPGSDVRPGDWYCGV NCGTHNFANRS+CF CGA
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLA--DLGLFGGGGGGSRGRSISSSSSSSYGG--VASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGA

Query:  FKDESAATA-----ARGGFDFDVAPRGSRSFGFGSNGSRGG-SSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF
        FKDESAA+A       GGFDFDV  R  RSFG  S  SRG  S W SGDWICSR GCNVHNFASRMECFRCNAPRDSF
Subjt:  FKDESAATA-----ARGGFDFDVAPRGSRSFGFGSNGSRGG-SSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSF

A0A6J1DB61 transcription initiation factor TFIID subunit 15-like3.7e-6778.7Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDW+CRSCQHLNFQRRECCQRCG+S+F    G+F GGGGG R  +  SS  SSYGGVASPGSDVRPGDWYCGV NCGTHNFA+RSSCF CGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAA--TAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDS
        SAA    A GGFDFD++ R SR FGFG+N SR GSSWKSGDWIC+RSGCN HNFASRMECFRCN PRDS
Subjt:  SAA--TAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDS

A0A6J1HKM2 uncharacterized RNA-binding protein C17H9.04c-like2.7e-94100Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
Subjt:  SAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

A0A6J1KI84 uncharacterized RNA-binding protein C17H9.04c-like4.1e-8793.1Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSI-----SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG
        MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLG+F   GGGSRGRSI     SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSI-----SSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCG

Query:  AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF
        AFKDESAATAARGGFD DVAPRGSRSFGFG+NGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD FF
Subjt:  AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c1.5e-0928.35Show/hide
Query:  RPGDWNCRSCQHLNFQRRECCQRC------------GESRFLADLGLFGGGGGGSR------GRSISSS----------------------SSSSYGGVA
        RPGDWNC  C   NFQRR  C RC            G + F  D       G GS       G S+  S                      SS S+GG  
Subjt:  RPGDWNCRSCQHLNFQRRECCQRC------------GESRFLADLGLFGGGGGGSR------GRSISSS----------------------SSSSYGGVA

Query:  SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATA------ARGGFDFD----------------------------VAPRGSRSFGFGSNG
              R GDW CG   CG HNFA    C  CGA +  +A  A        G +  +                            V     ++FG G NG
Subjt:  SPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATA------ARGGFDFD----------------------------VAPRGSRSFGFGSNG

Query:  ---------------SRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDS
                       SR   +   GDW+C    C   NF  R  C RCNAP  S
Subjt:  ---------------SRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDS

Arabidopsis top hitse value%identityAlignment
AT2G17975.1 zinc finger (Ran-binding) family protein3.4e-0926.64Show/hide
Query:  RPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGG-------------SRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRS
        R GDW C  C + N+  RE C++CG+S+ +A L      G               S  +  S  + S+    AS   + R GDW C    CG HN+++R 
Subjt:  RPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGG-------------SRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRS

Query:  SCFVCG-------------------------------AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGS------RGGSSWKSGDWICSRSGCNVHNF
         C  C                                + + +SA  A+  G              F    S       G   W+ GDW+C  + C  HN+
Subjt:  SCFVCG-------------------------------AFKDESAATAARGGFDFDVAPRGSRSFGFGSNGS------RGGSSWKSGDWICSRSGCNVHNF

Query:  ASRMECFRCNAPRD
        ASR EC RC   RD
Subjt:  ASRMECFRCNAPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein1.3e-2739.51Show/hide
Query:  GDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAAT
        GDW C +CQH NF++RE CQ+CG  +F           GG         S+  Y       ++V  GDWYCG  NCG+HN+A+R+SC+ CG  K E    
Subjt:  GDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAAT

Query:  AARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
               +     G++   +G++G+     WK+GDW+C R GC VHN+ASR ECF+C   RD
Subjt:  AARGGFDFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein4.9e-4860Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        M+RPGDWNCRSC HLNFQRR+ CQRCG+SR         GG GG    +    + S++G   + GSDVRPGDWYC V NCGTHNFA+RS+CF CG FKDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  SAATAARGGFD----FDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
        + A    GG      FD     SR  G G     G SSWKSGDWIC+R GCN HNFASRMECFRCNAPRD
Subjt:  SAATAARGGFD----FDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein3.2e-4760.12Show/hide
Query:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE
        MNRPGDWNCR C HLNFQRR+ CQRC E R     G+      G  GR +    SSS+G   + G DVRPGDWYC + +CGTHNFANRSSCF CGA KDE
Subjt:  MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDE

Query:  ---SAATAARGGFDFDVAPRGSRSFGFGSNGSRGG----SSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD
           S+A A  G  D +V PR    FGFG + S GG    S WKSGDWIC RSGCN HNFASR ECFRCNAP++
Subjt:  ---SAATAARGGFDFDVAPRGSRSFGFGSNGSRGG----SSWKSGDWICSRSGCNVHNFASRMECFRCNAPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCATCTCAACTTCCAACGGCGGGAGTGCTGTCAACGCTGTGGCGAATCCAGATTCCTGGCTGACCTTGGGCT
CTTTGGCGGCGGCGGCGGCGGCAGTAGAGGAAGAAGCATTTCGTCCTCCTCCTCCTCCTCGTACGGTGGAGTTGCCTCCCCGGGCTCCGACGTCCGTCCTGGAGACTGGT
ACTGTGGCGTTGCCAACTGTGGAACCCACAACTTTGCGAACCGGTCGAGCTGCTTCGTATGCGGCGCGTTTAAGGATGAGTCAGCAGCGACGGCTGCCAGAGGTGGGTTT
GATTTTGATGTGGCGCCACGTGGATCGAGGAGCTTTGGTTTTGGAAGCAATGGCTCACGTGGTGGGTCTTCTTGGAAGTCTGGTGACTGGATTTGTTCCAGGTCAGGATG
CAACGTACATAACTTTGCGAGTAGAATGGAGTGTTTTCGATGCAATGCTCCCAGAGACTCGTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCAAGCAAGCAAGGCCGTAAATCAATAAAGCAATTTGGTTCAATATTCTTTTGAAATCCACAGTTTGAATTATTATTATTTGCTTTAATTTCTTTACCAAGTTA
TTGTTTTTATTATATTTCTTCATTTATTTTTCGGCTATATAAACCACCCCCTCCATTTCCTTCTTCCATCACTCGCCTCCCTCTGCTTCACTTAGCACCGCCGTTGCCGG
AGAAATGAACAGGCCGGGGGATTGGAACTGCAGATCATGCCAGCATCTCAACTTCCAACGGCGGGAGTGCTGTCAACGCTGTGGCGAATCCAGATTCCTGGCTGACCTTG
GGCTCTTTGGCGGCGGCGGCGGCGGCAGTAGAGGAAGAAGCATTTCGTCCTCCTCCTCCTCCTCGTACGGTGGAGTTGCCTCCCCGGGCTCCGACGTCCGTCCTGGAGAC
TGGTACTGTGGCGTTGCCAACTGTGGAACCCACAACTTTGCGAACCGGTCGAGCTGCTTCGTATGCGGCGCGTTTAAGGATGAGTCAGCAGCGACGGCTGCCAGAGGTGG
GTTTGATTTTGATGTGGCGCCACGTGGATCGAGGAGCTTTGGTTTTGGAAGCAATGGCTCACGTGGTGGGTCTTCTTGGAAGTCTGGTGACTGGATTTGTTCCAGGTCAG
GATGCAACGTACATAACTTTGCGAGTAGAATGGAGTGTTTTCGATGCAATGCTCCCAGAGACTCGTTCTTCTGAAATATCGAATTTTCATCAAAATTTTCTATATTTTTC
TTCGAATATAATAGTACATAGTTTAGTTCGTATCATTTTTCATTTGATTTTGATTGTAATCTCTCGAGTTAGAGTGATATTGAGTTGTATTTTAGCTTTTCTTAATCAAT
TTTATGGCAAGGAATTAATCTCCTTTTTAGAATAAAAAGTGTTTTTTCTCTACCAA
Protein sequenceShow/hide protein sequence
MNRPGDWNCRSCQHLNFQRRECCQRCGESRFLADLGLFGGGGGGSRGRSISSSSSSSYGGVASPGSDVRPGDWYCGVANCGTHNFANRSSCFVCGAFKDESAATAARGGF
DFDVAPRGSRSFGFGSNGSRGGSSWKSGDWICSRSGCNVHNFASRMECFRCNAPRDSFF