; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh08G006440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G006440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthionin-like protein 2
Genome locationCmo_Chr08:4186331..4187578
RNA-Seq ExpressionCmoCh08G006440
SyntenyCmoCh08G006440
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5498.15Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAPRDLN LDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4376.85Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+V+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF+ASAP D N ++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C+ TC+KA
Subjt:  CSRTCLKA

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-5397.22Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAP DLN LDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]1.9e-6896.3Show/hide
Query:  NHLRFHKGSVYLRNTLSHSLKPQKARKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKL
        NHL F KGSVYLRNTLSHS KPQKARKMKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLN LDTHYFCKL
Subjt:  NHLRFHKGSVYLRNTLSHSLKPQKARKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKL

Query:  GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA
        GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA
Subjt:  GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]1.3e-4883.33Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+++ICFI+SLV GRSTASFGKCYAKCF+VCAITPG+PIGTCG KCL DCLF+AS+P D N LDTHYFCKLGCATSLCTKFSTK DPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C +TC+KA
Subjt:  CSRTCLKA

TrEMBL top hitse value%identityAlignment
A0A067E0U5 Uncharacterized protein2.1e-2552.29Show/hide
Query:  RKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV
        RK+ S++++  +  L+ G+S A+F +CY  CFI+C ITPG  +G+C  KCL DC+F       L+  DT YFCKLGCATSLCT  S+K +PA +KVE CV
Subjt:  RKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV

Query:  NSCSRTCLK
        NSCS++C K
Subjt:  NSCSRTCLK

A0A0A0KC18 Uncharacterized protein2.4e-4078.43Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+V+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF+AS+P DLN +DTHYFCKLGCATS CTKFSTK DP +K   + V +
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CS
         S
Subjt:  CS

A0A5D3BCH5 Thionin-like protein 21.8e-2759.46Show/hide
Query:  MKSIVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC
        M+SIV+I FILSLVAGRST      K + KC   CAI P +P +  C  KC+ADC+ +AS+P DLNR+DTHYFCKLGC T  CTK STK D  E KVE+C
Subjt:  MKSIVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLKA
         N+C +TC+KA
Subjt:  VNSCSRTCLKA

A0A6J1DDL8 thionin-like protein 21.4e-3769.37Show/hide
Query:  KMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF-LASAPRDLN-RLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC
        K   ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF  AS   D N ++DT YFCKLGCATSLCTKFSTK DPAEKKV SC
Subjt:  KMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF-LASAPRDLN-RLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLKA
        V+SCS+ C+ A
Subjt:  VNSCSRTCLKA

A0A6J1KDK0 thionin-like protein 29.2e-6996.3Show/hide
Query:  NHLRFHKGSVYLRNTLSHSLKPQKARKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKL
        NHL F KGSVYLRNTLSHS KPQKARKMKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLN LDTHYFCKL
Subjt:  NHLRFHKGSVYLRNTLSHSLKPQKARKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKL

Query:  GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA
        GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA
Subjt:  GCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.3e-0833.64Show/hide
Query:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNRLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +++++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P    N +D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNRLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.9.6e-1033.64Show/hide
Query:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNRLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +++++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P    N +D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFLASAPR-DLNRLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

AT1G12672.1 unknown protein4.6e-0448.65Show/hide
Query:  YFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  YFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC

AT1G12672.2 unknown protein1.4e-0540Show/hide
Query:  CLADCLFLASAPRDLNRLDTH--YFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        C+  CL   S+  D      H  Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  CLADCLFLASAPRDLNRLDTH--YFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATCATTTGCGTTTCCACAAGGGAAGTGTTTATTTAAGAAACACTCTTTCCCACAGCCTCAAACCACAGAAAGCAAGAAAAATGAAGTCCATTGTTGTAATATG
CTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACAGCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATCACACCAGGCGTCCCTATTGGCACATGCG
GCGGAAAGTGCTTGGCCGATTGCCTCTTCCTTGCCTCTGCCCCTAGAGATCTCAACCGTTTGGACACTCATTATTTCTGCAAACTTGGCTGCGCCACTTCTCTCTGCACC
AAATTTAGCACCAAGACAGACCCGGCTGAGAAGAAAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGTTTGAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
TGCTTAATCTTACTAAATCACTCGAAATCATTTCTTACCTCATTTTTATTTTAAATAATTTTCGATTCTGCGTTAGATTTTGACAATATGCCATCAGGGGTAAAATAGTC
ATTTTCTAAAAGTATAGACGGCCAAAGGATTTGAGTCGACCGTAGTAATTCTCTCAATCATTTTCTTAAATCGTCAATGCTTAATCATTTGCGTTTCCACAAGGGAAGTG
TTTATTTAAGAAACACTCTTTCCCACAGCCTCAAACCACAGAAAGCAAGAAAAATGAAGTCCATTGTTGTAATATGCTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACA
GCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATCACACCAGGCGTCCCTATTGGCACATGCGGCGGAAAGTGCTTGGCCGATTGCCTCTTCCTTGC
CTCTGCCCCTAGAGATCTCAACCGTTTGGACACTCATTATTTCTGCAAACTTGGCTGCGCCACTTCTCTCTGCACCAAATTTAGCACCAAGACAGACCCGGCTGAGAAGA
AAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGTTTGAAGGCTTAAAACTGAGGAGCTGGGACTGGCTTTAAAGACAATAAGTGTCGGTGGTGAAGACCAAACACC
ATTGGACTCTAAGCTTGTCCCATATCTACTAAGCATGTTTTGATATATCTATATGCTTTCTAGTTTCTGCATGTACTCGTCCTCGTCCTCGTCGTCACTGTGTAATAATC
AAGGTTGCTTTTCGTTGCTATAGTACTGGGAATGATGTTTGGTGATATTTAGATTAGCTCACGATCAAAACTTCATTTATTCTACCCAATATGATTTCATGTCTAGTTAA
AATCACATCAGTTAATAATTAGTACGACGGCAGAAAAATTTAATGGTACAACAACATACAACATACGTTGTATAAAACAGTTCCTTTCGGGGTTCATTGCTCAAATCCAC
AGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTCCAGCTAGAAGAGGTTTCCACACCCTTATAAACAATGATTCGTTCTCCTTTCCAATCAATATGGGATATCACAAT
CTACCCCCTTCG
Protein sequenceShow/hide protein sequence
MLNHLRFHKGSVYLRNTLSHSLKPQKARKMKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPRDLNRLDTHYFCKLGCATSLCT
KFSTKTDPAEKKVESCVNSCSRTCLKA