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CmoCh08G006840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G006840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr08:4371258..4371652
RNA-Seq ExpressionCmoCh08G006840
SyntenyCmoCh08G006840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059316.1 auxin-responsive protein IAA27-like [Cucumis melo var. makuwa]5.4e-0657.81Show/hide
Query:  KKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTTTTGLFKEARKEVAEETEKGKNGNEE
        KK+V W R WLVKM ++ L W LD GG IG+ V+A        F+EAR EVAEETE+GKNG EE
Subjt:  KKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTTTTGLFKEARKEVAEETEKGKNGNEE

KAG6593477.1 hypothetical protein SDJN03_12953, partial [Cucurbita argyrosperma subsp. sororia]4.7e-3497.4Show/hide
Query:  MSICSRWCRGGKKKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTT-TTGLFKEARKEVAEETEKGKNGNEE
        MSICSRWCRGGKKKVVFWQRSWLVKMGDISLQWRLDD GRIGIPVMAWTTT TTGLFKEARKEVAEETEKGKNGNEE
Subjt:  MSICSRWCRGGKKKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTT-TTGLFKEARKEVAEETEKGKNGNEE

KAG7025821.1 hypothetical protein SDJN02_12319, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-2196.55Show/hide
Query:  RSWLVKMGDISLQWRLDDGGRIGIPVMAW-TTTTTGLFKEARKEVAEETEKGKNGNEE
        RSWLVKMGDISLQWRLDD GRIGIPVMAW TTTTTGLFKEARKEVAEETEKGKNGNEE
Subjt:  RSWLVKMGDISLQWRLDDGGRIGIPVMAW-TTTTTGLFKEARKEVAEETEKGKNGNEE

TrEMBL top hitse value%identityAlignment
A0A5A7UYN9 Auxin-responsive protein2.6e-0657.81Show/hide
Query:  KKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTTTTGLFKEARKEVAEETEKGKNGNEE
        KK+V W R WLVKM ++ L W LD GG IG+ V+A        F+EAR EVAEETE+GKNG EE
Subjt:  KKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTTTTGLFKEARKEVAEETEKGKNGNEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACACAGCTCACAAATCACTTTGATTTCATACCTTAGCACGGATGACATCGGTATACCGCACAACCCGAACAATCAAAAGCACAAAAGGGACAATAAGAACAGCAT
GTTCGACGCGAAAACGACTCGAAACATGCTGAAGATGAGTATCTGCAGCAGGTGGTGCAGAGGAGGTAAGAAGAAGGTTGTTTTCTGGCAGAGGAGTTGGTTGGTGAAGA
TGGGTGACATCAGTCTGCAGTGGAGGCTCGACGATGGCGGCAGGATCGGGATTCCGGTCATGGCATGGACGACGACGACGACAGGATTGTTTAAAGAAGCGAGGAAGGAG
GTAGCAGAGGAGACGGAGAAAGGAAAGAATGGCAATGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATACACAGCTCACAAATCACTTTGATTTCATACCTTAGCACGGATGACATCGGTATACCGCACAACCCGAACAATCAAAAGCACAAAAGGGACAATAAGAACAGCAT
GTTCGACGCGAAAACGACTCGAAACATGCTGAAGATGAGTATCTGCAGCAGGTGGTGCAGAGGAGGTAAGAAGAAGGTTGTTTTCTGGCAGAGGAGTTGGTTGGTGAAGA
TGGGTGACATCAGTCTGCAGTGGAGGCTCGACGATGGCGGCAGGATCGGGATTCCGGTCATGGCATGGACGACGACGACGACAGGATTGTTTAAAGAAGCGAGGAAGGAG
GTAGCAGAGGAGACGGAGAAAGGAAAGAATGGCAATGAGGAATAA
Protein sequenceShow/hide protein sequence
MIHSSQITLISYLSTDDIGIPHNPNNQKHKRDNKNSMFDAKTTRNMLKMSICSRWCRGGKKKVVFWQRSWLVKMGDISLQWRLDDGGRIGIPVMAWTTTTTGLFKEARKE
VAEETEKGKNGNEE