CuGenDBv2

Gene ID	CmoCh08G007040
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	UPF0664 stress-induced protein C29B12.11c
Genome location	Cmo_Chr08:4460250..4461014
RNA-Seq Expression	CmoCh08G007040
Synteny	CmoCh08G007040
Gene Ontology terms	GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003713 - transcription coactivator activity (molecular function) GO:0031490 - chromatin DNA binding (molecular function)
InterPro domains	IPR044852 - WW domain-binding protein 2-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141150.1 uncharacterized protein LOC101208147 [Cucumis sativus]

2.5e-50

92.52

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPTKIFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

XP_008465172.1 PREDICTED: uncharacterized protein LOC103502837 [Cucumis melo]

2.5e-50

92.52

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPTKIFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

XP_022932704.1 uncharacterized protein LOC111439171 [Cucurbita moschata]

3.2e-53

97.2

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

XP_022972085.1 uncharacterized protein LOC111470726 [Cucurbita maxima]

1.6e-52

96.26

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMR+AYVDPHDPTKIFLQQPSTESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

XP_038903065.1 uncharacterized protein LOC120089752 [Benincasa hispida]

1.6e-49

90.65

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPT+IFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QP ENAM
Subjt:  QPAENAM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI97 Uncharacterized protein

1.2e-50

92.52

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPTKIFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

A0A1S3CPS8 uncharacterized protein LOC103502837

1.2e-50

92.52

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPTKIFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

A0A5A7T2S6 UPF0664 stress-induced protein C29B12.11c

1.2e-50

92.52

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVP+DQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQ+ NAGPRVDPLQAAQTPVDEMMRHAYVDP+DPTKIFLQQP+TESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

A0A6J1EXS2 uncharacterized protein LOC111439171

1.6e-53

97.2

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

A0A6J1I7J8 uncharacterized protein LOC111470726

7.7e-53

96.26

Show/hide

Query:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS
        +  VVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMR+AYVDPHDPTKIFLQQPSTESQLRRRTYQS
Subjt:  INXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQS

Query:  QPAENAM
        QPAENAM
Subjt:  QPAENAM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G11680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

4.6e-42

72.57

Show/hide

Query:  EINXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTN-------AGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQ
        ++  VVP+++HRALYSTHSFKILFKEGGCGTFVPLF NL+SSVRQYN+          A P VDPLQAAQTPVDEMMRHAYVDP+DPT+I+LQQPS ESQ
Subjt:  EINXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTN-------AGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQ

Query:  LRRRTYQSQPAEN
        LRRR Y S  AE+
Subjt:  LRRRTYQSQPAEN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGGAGATCGAACAAGAAGAAATCAACNTTGTGGTGCCTGATGACCAGCACAGAGCTCTCTATTCGACACACTCGTTTAAGATTTTGTTCAAGGAAGGGGGATGTGGTAC
CTTTGTACCACTCTTCTTCAACCTGCTGTCTTCAGTGAGGCAATACAATCAATACACGAATGCAGGTCCTCGAGTCGATCCATTGCAGGCAGCACAAACTCCTGTCGATG
AAATGATGAGACATGCATATGTGGACCCACATGATCCGACCAAAATCTTCTTACAACAGCCATCGACAGAGTCCCAGTTAAGGCGGCGCACCTACCAGTCCCAACCAGCT
GAAAATGCAATGTGAAGTTAGTTGAACGACCTCATGCAAATAGTTTTATTGGTTGGTTGGTTGGTACTTTGTTTAAGTGAGGGAGTTGATGATGGAACGAGTGAATACTT
GTACAGTTGAAGGATGGACCGTTGAATTTAAAGTTACGGTTAGACCCAATTGTTATCTACTTAAGCTTCTACTTAACTCTTCCTGTCTGTTATATTGCCTGGGGCCGGAT
GAAAGGATTTACGTAAAGAATTTGTTCAACTTAAATATAATAATAGAAGTGTATCCTGTTCTTATGATTGTATGGCC

Protein sequence

Show/hide protein sequence

MEIEQEEINXVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQYTNAGPRVDPLQAAQTPVDEMMRHAYVDPHDPTKIFLQQPSTESQLRRRTYQSQPA
ENAM

CmoCh08G007040 (gene) of Cucurbita moschata (Rifu) v1 genome