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CmoCh08G007050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh08G007050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDUF4005 domain-containing protein
Genome locationCmo_Chr08:4462352..4463470
RNA-Seq ExpressionCmoCh08G007050
SyntenyCmoCh08G007050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593494.1 hypothetical protein SDJN03_12970, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2568.97Show/hide
Query:  HRSFNKYNRYISALSDYGEDKAAPLQPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        +R+ +K  RYIS LS+YG D+AAPLQ I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  HRSFNKYNRYISALSDYGEDKAAPLQPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

KAG7025841.1 Protein IQ-DOMAIN 31, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2546.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

XP_022964232.1 protein IQ-DOMAIN 14-like [Cucurbita moschata]2.0e-2546.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

XP_023000360.1 protein IQ-DOMAIN 14-like [Cucurbita maxima]2.0e-2546.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

XP_023514899.1 protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo]2.0e-2546.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

TrEMBL top hitse value%identityAlignment
A0A6J1CVX7 protein IQ-DOMAIN 141.0e-1440.61Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYNRYI------------------------------------------------------------SALSDYGEDKAAP
        MQA  RAQT +RTQRA RSFNK NR+I                                                            +ALS+ G D   P
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYNRYI------------------------------------------------------------SALSDYGEDKAAP

Query:  LQPISSLLPCLNRPHPFTLDCHN-VHQDFKWYLMDEDYKFPTTHSMSQLSNSF-ASTNMPVTPSK
        LQ ISS  PC NRP     DCHN V +DF+W LM +D KFPT HS  +LSNSF AS N+PVTPSK
Subjt:  LQPISSLLPCLNRPHPFTLDCHN-VHQDFKWYLMDEDYKFPTTHSMSQLSNSF-ASTNMPVTPSK

A0A6J1GMR2 protein IQ-DOMAIN 14-like4.1e-1643.48Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN--------------------------------------------------------RYISALSDYGEDKAAPLQPI
        MQ   RAQT IRTQRA RSFNK N                                                        RYISA S+ G D  A     
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN--------------------------------------------------------RYISALSDYGEDKAAPLQPI

Query:  SSLLPCLNRPHPFTLDCH-NVHQDFKWYLMDEDYKFPTTHSMSQLS-NSFASTNMPVTPSK
        SS LPCLNRP    +DCH N+ QDF+W LM ED KFPT HS  +LS NSFASTNMPVTPSK
Subjt:  SSLLPCLNRPHPFTLDCH-NVHQDFKWYLMDEDYKFPTTHSMSQLS-NSFASTNMPVTPSK

A0A6J1HHA1 protein IQ-DOMAIN 14-like9.6e-2646.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

A0A6J1JYQ7 protein IQ-DOMAIN 14-like1.9e-1342.24Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN--------------------------------------------------------RYISALSDYGEDKAAPLQPI
        MQ   RAQT IRTQRA RSFNK N                                                        RYISA S+ G D  A     
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN--------------------------------------------------------RYISALSDYGEDKAAPLQPI

Query:  SSLLPCLNRPHPFTLDCH-NVHQDFKWYLMDEDYKFPTTHSMSQLS-NSFASTNMPVTPSK
        SS LPCLNR  P  +D H N+ QDF+W LM ED KFPT HS  +LS NSFASTNM VTPSK
Subjt:  SSLLPCLNRPHPFTLDCH-NVHQDFKWYLMDEDYKFPTTHSMSQLS-NSFASTNMPVTPSK

A0A6J1KFN9 protein IQ-DOMAIN 14-like9.6e-2646.91Show/hide
Query:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL
        MQA  RAQT +RTQRA RSFNK N                                                           RYIS LS+YG D+AAPL
Subjt:  MQAFCRAQTVIRTQRAHRSFNKYN-----------------------------------------------------------RYISALSDYGEDKAAPL

Query:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK
        Q I+S LP  NRP  FTLDCHNVH+DF+W LM ED KFPT HS  +LSNSFASTNM VTPSK
Subjt:  QPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCCTTTTGTAGAGCTCAAACGGTCATTAGGACTCAAAGGGCTCATCGATCTTTCAATAAATATAATAGGTACATCTCTGCATTATCCGATTATGGAGAAGACAA
AGCAGCACCTCTCCAACCAATCTCTTCGTTGTTGCCATGTCTAAATCGACCTCACCCGTTTACACTTGATTGTCACAATGTACATCAAGACTTCAAATGGTACTTGATGG
ACGAAGATTACAAGTTCCCTACCACTCACAGCATGTCCCAACTATCAAATTCATTCGCCTCCACCAACATGCCGGTGACCCCATCAAAGAGGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCCTTTTGTAGAGCTCAAACGGTCATTAGGACTCAAAGGGCTCATCGATCTTTCAATAAATATAATAGGTACATCTCTGCATTATCCGATTATGGAGAAGACAA
AGCAGCACCTCTCCAACCAATCTCTTCGTTGTTGCCATGTCTAAATCGACCTCACCCGTTTACACTTGATTGTCACAATGTACATCAAGACTTCAAATGGTACTTGATGG
ACGAAGATTACAAGTTCCCTACCACTCACAGCATGTCCCAACTATCAAATTCATTCGCCTCCACCAACATGCCGGTGACCCCATCAAAGAGGGAATAA
Protein sequenceShow/hide protein sequence
MQAFCRAQTVIRTQRAHRSFNKYNRYISALSDYGEDKAAPLQPISSLLPCLNRPHPFTLDCHNVHQDFKWYLMDEDYKFPTTHSMSQLSNSFASTNMPVTPSKRE